Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H00537 Erythranthe guttata HOM05D004071 ORTHO05D004501 6.2e-178 627.5 349 100.0
SGA_v2.0_scaffold204G41658 Striga asiatica HOM05D004071 ORTHO05D004501 3.3e-147 525.4 349 80.8
Migut.K00863 Erythranthe guttata HOM05D004071 ORTHO05D004501 1.7e-143 513.1 347 74.6
SalBow1G4702 Salvia bowleyana HOM05D004071 ORTHO05D004501 2.5e-142 509.2 350 77.1
SalBow1G4945 Salvia bowleyana HOM05D004071 ORTHO05D004501 2.1e-141 506.1 350 76.9
Oeu032872.2 Olea europaea HOM05D004071 ORTHO05D004501 2.7e-141 505.8 349 71.1
Oeu049330.1 Olea europaea HOM05D004071 ORTHO05D004501 1.4e-140 503.4 347 70.0
Oeu025120.1 Olea europaea HOM05D004071 ORTHO05D004501 4.0e-140 501.9 346 75.1
Cc07_g04980 Coffea canephora HOM05D004071 ORTHO05D004501 5.2e-140 501.5 346 73.7
MSTRG.23829 Avicennia marina HOM05D004071 ORTHO05D004501 8.8e-140 500.7 349 73.6
Cfa007968 Carpinus fangiana HOM05D004071 ORTHO05D004501 1.3e-138 496.9 349 72.2
CiPaw.04G003700 Carya illinoinensis HOM05D004071 ORTHO05D004501 1.4e-137 493.4 349 69.6
Atru.chr10.1868 Acer truncatum HOM05D004071 ORTHO05D004501 7.0e-137 491.1 347 68.6
Hma1.2p1_0550F.1_g177140 Hydrangea macrophylla HOM05D004071 ORTHO05D004501 9.1e-137 490.7 346 72.0
Duzib268G0320 Durio zibethinus HOM05D004071 ORTHO05D004501 2.7e-136 489.2 347 76.1
MD17G1072900 Malus domestica HOM05D004071 ORTHO05D004501 2.9e-135 485.7 347 67.7
Prupe.3G241500 Prunus persica HOM05D004071 ORTHO05D004501 3.8e-135 485.3 347 67.7
SGA_v2.0_scaffold150G36618 Striga asiatica HOM05D002617 ORTHO05D009035 6.5e-135 484.6 353 72.2
Lsat_1_v5_gn_4_175840 Lactuca sativa HOM05D004071 ORTHO05D004501 8.5e-135 484.2 347 77.8
Peaxi162Scf01056g00238 Petunia axillaris HOM05D004071 ORTHO05D004501 1.5e-134 483.4 346 72.8
Solyc03g045090.3 Solanum lycopersicum HOM05D004071 ORTHO05D004501 1.5e-134 483.4 349 73.9
Sopen03g009550 Solanum pennellii HOM05D004071 ORTHO05D004501 1.2e-133 480.3 349 75.4
Ciclev10012116m.g Citrus clementina HOM05D004071 ORTHO05D004501 2.1e-133 479.6 348 66.7
Psat1g062200 Pisum sativum HOM05D004071 ORTHO05D004501 6.1e-133 478.0 347 66.3
CiPaw.03G006000 Carya illinoinensis HOM05D004071 ORTHO05D004501 1.0e-132 477.2 349 70.2
COL.COLO4_04619 Corchorus olitorius HOM05D004071 ORTHO05D004501 1.0e-132 477.2 347 68.6
PGSC0003DMG400018768 Solanum tuberosum HOM05D004071 ORTHO05D004501 2.3e-132 476.1 350 70.0
CAN.G153.14 Capsicum annuum HOM05D004071 ORTHO05D004501 5.2e-132 474.9 351 69.2
Thecc.04G143800 Theobroma cacao HOM05D004071 ORTHO05D004501 5.2e-132 474.9 348 69.0
ECA232G0981 Erigeron canadensis HOM05D004071 ORTHO05D004501 6.8e-132 474.6 349 73.6
HanXRQChr09g0263441 Helianthus annuus HOM05D004071 ORTHO05D004501 6.8e-132 474.6 344 74.1
CSS0015718 Camellia sinensis var. sinensis HOM05D004071 ORTHO05D004501 8.8e-132 474.2 346 65.9
Potri.004G104900 Populus trichocarpa HOM05D004071 ORTHO05D004501 8.8e-132 474.2 347 67.1
Ca_14084_v3 Cicer arietinum L. HOM05D004071 ORTHO05D004501 2.6e-131 472.6 347 69.2
Lj2g0019369 Lotus japonicus HOM05D004071 ORTHO05D004501 2.6e-131 472.6 347 66.9
TPR.G9685 Trifolium pratense HOM05D004071 ORTHO05D004501 5.7e-131 471.5 347 65.1
MD09G1082200 Malus domestica HOM05D004071 ORTHO05D004501 7.5e-131 471.1 347 65.7
Gohir.D07G183200 Gossypium hirsutum HOM05D004071 ORTHO05D004501 3.7e-130 468.8 347 66.6
Glyma.13G047900 Glycine max HOM05D004071 ORTHO05D004501 4.8e-130 468.4 347 65.1
Phvul.004G073300 Phaseolus vulgaris HOM05D004071 ORTHO05D004501 4.8e-130 468.4 348 64.9
Lsat_1_v5_gn_2_86560 Lactuca sativa HOM05D004071 ORTHO05D004501 6.3e-130 468.0 345 66.4
Gohir.A07G073300 Gossypium hirsutum HOM05D004071 ORTHO05D004501 1.1e-129 467.2 344 64.5
Gorai.001G082400 Gossypium raimondii HOM05D004071 ORTHO05D004501 1.1e-129 467.2 344 65.1
Gorai.001G203600 Gossypium raimondii HOM05D004071 ORTHO05D004501 1.8e-129 466.5 347 66.3
CANSAT64G0921 Cannabis sativa HOM05D004071 ORTHO05D004501 5.4e-129 464.9 350 64.9
Lj4A130T17 Lonicera japonica HOM05D004071 ORTHO05D004501 2.7e-128 462.6 346 74.3
Gohir.A07G176100 Gossypium hirsutum HOM05D004071 ORTHO05D004501 3.5e-128 462.2 345 65.8
DCAR_007521 Daucus carota HOM05D000912 ORTHO05D004501 4.5e-128 461.8 344 63.7
Dinv34868 Davidia involucrata HOM05D004071 ORTHO05D004501 4.5e-128 461.8 347 72.9
Gohir.A08G037600 Gossypium hirsutum HOM05D004071 ORTHO05D004501 5.9e-128 461.5 347 72.3
Gohir.D07G078000 Gossypium hirsutum HOM05D004071 ORTHO05D004501 1.3e-127 460.3 360 62.5
Medtr6g016780 Medicago truncatula HOM05D004071 ORTHO05D004501 1.3e-127 460.3 348 65.8
Rhsim08G0080100 Rhododendron simsii HOM05D004071 ORTHO05D004501 1.7e-127 459.9 349 70.5
GSVIVG01036463001 Vitis vinifera HOM05D004071 ORTHO05D004501 5.0e-127 458.4 343 74.3
CsaV3_5G039030 Cucumis sativus L. HOM05D004071 ORTHO05D004501 8.5e-127 457.6 347 67.7
CARHR076390 Cardamine hirsuta HOM05D004071 ORTHO05D004501 1.1e-126 457.2 347 67.7
Cpa.g.sc179.42 Carica papaya HOM05D004071 ORTHO05D004501 1.1e-126 457.2 355 63.1
ClCG11G005270 Citrullus lanatus HOM05D004071 ORTHO05D004501 1.1e-126 457.2 347 69.2
MELO3C022067.2 Cucumis melo HOM05D004071 ORTHO05D004501 1.1e-126 457.2 347 65.4
Gorai.004G047400 Gossypium raimondii HOM05D004071 ORTHO05D004501 1.5e-126 456.8 347 73.2
TAR622G0876 Trochodendron aralioides HOM05D004071 ORTHO05D004501 1.5e-126 456.8 340 66.5
Gohir.D08G047900 Gossypium hirsutum HOM05D004071 ORTHO05D004501 3.2e-126 455.7 347 72.6
VMungo0464G1781 Vigna mungo HOM05D004071 ORTHO05D004501 3.2e-126 455.7 348 72.1
Actinidia26308 Actinidia chinensis HOM05D004071 ORTHO05D004501 9.5e-126 454.1 346 72.3
THA.LOC104827150 Tarenaya hassleriana HOM05D004071 ORTHO05D004501 2.8e-125 452.6 349 67.9
arahy.Tifrunner.gnm1.ann1.85GVTZ Arachis hypogaea HOM05D004071 ORTHO05D004501 3.6e-125 452.2 347 61.7
PGR042G1023 Punica granatum HOM05D004071 ORTHO05D004501 2.3e-124 449.5 347 70.6
TAR629G1013 Trochodendron aralioides HOM05D004071 ORTHO05D004501 2.3e-124 449.5 343 71.1
arahy.Tifrunner.gnm1.ann1.SG5ZZ4 Arachis hypogaea HOM05D004071 ORTHO05D004501 3.0e-124 449.1 343 66.2
FAN09G0395 Fragaria x ananassa HOM05D000085 ORTHO05D004501 3.0e-124 449.1 347 65.1
Sed0017773 Sechium edule HOM05D004071 ORTHO05D004501 3.0e-124 449.1 345 64.9
arahy.Tifrunner.gnm1.ann1.UUQR92 Arachis hypogaea HOM05D004071 ORTHO05D004501 4.0e-124 448.7 343 66.2
Aqoxy3G00414 Aquilegia oxysepala HOM05D004071 ORTHO05D004501 5.2e-124 448.4 346 62.4
TWI74G0934 Tripterygium wilfordii HOM05D004071 ORTHO05D004501 6.8e-124 448.0 347 73.2
PSO063G1546 Papaver somniferum HOM05D004071 ORTHO05D004501 2.0e-123 446.4 343 70.6
PSO782G5396 Papaver somniferum HOM05D004071 ORTHO05D004501 2.0e-123 446.4 353 66.3
Manes.02G065500 Manihot esculenta HOM05D004071 ORTHO05D004501 3.4e-123 445.7 347 64.0
FAN05G3345 Fragaria x ananassa HOM05D004071 ORTHO05D004501 7.5e-123 444.5 347 72.3
RcHm_v2.0_Chr2g0163461 Rosa chinensis HOM05D004071 ORTHO05D004501 7.5e-123 444.5 347 71.8
EL10Ac2g04623 Beta vulgaris HOM05D004071 ORTHO05D004501 9.8e-123 444.1 349 67.9
FvH4_6g45520 Fragaria vesca HOM05D004071 ORTHO05D004501 2.8e-122 442.6 347 70.6
HanXRQChr07g0200191 Helianthus annuus HOM05D004071 ORTHO05D004501 3.7e-122 442.2 346 65.9
MBI16_g36053_MAGBIO Magnolia biondii HOM05D004071 ORTHO05D004501 1.1e-121 440.7 369 59.1
FAN14G5468 Fragaria x ananassa HOM05D000085 ORTHO05D004501 5.4e-121 438.3 347 70.9
FAN02G1076 Fragaria x ananassa HOM05D000085 ORTHO05D004501 2.0e-120 436.4 347 70.9
Hund13742 Selenicereus undatus HOM05D004071 ORTHO05D004501 1.0e-119 434.1 351 61.8
Nn3g17651 Nelumbo nucifera HOM05D004071 ORTHO05D004501 1.9e-118 429.9 343 63.6
Ah.16g102220 Amaranthus hybridus HOM05D004071 ORTHO05D004501 9.5e-118 427.6 351 67.5
unitig_62.g23397 Utricularia gibba HOM05D004071 ORTHO05D004501 8.0e-117 424.5 350 63.7
AUR62008952 Chenopodium quinoa HOM05D004071 ORTHO05D004501 4.0e-116 422.2 345 64.3
Lalb_Chr17g0336551 Lupinus albus HOM05D004071 ORTHO05D004501 5.2e-116 421.8 343 68.5
Sed0022702 Sechium edule HOM05D004071 ORTHO05D004501 1.2e-115 420.6 326 62.6
Os01g0604700 Oryza sativa ssp. japonica HOM05D004071 ORTHO05D004501 1.7e-114 416.8 357 56.3
Actinidia36304 Actinidia chinensis HOM05D004071 ORTHO05D004501 2.9e-114 416.0 346 58.7
Carub.0003s0151 Capsella rubella HOM05D004071 ORTHO05D004501 1.1e-113 414.1 348 62.4
BcaC09g47699 Brassica carinata HOM05D004071 ORTHO05D004501 1.4e-113 413.7 343 59.5
Zm00001eb161490 Zea mays HOM05D004071 ORTHO05D004501 1.8e-113 413.3 342 57.0
Hma1.2p1_0136F.1_g061955 Hydrangea macrophylla HOM05D004071 ORTHO05D004501 2.4e-113 412.9 309 66.3
HPP92_011599 Vanilla planifolia HOM05D004071 ORTHO05D004501 2.4e-113 412.9 346 58.1
BcaB04g21412 Brassica carinata HOM05D004071 ORTHO05D004501 5.4e-113 411.8 349 63.0
Duzib133G0960 Durio zibethinus HOM05D004071 ORTHO05D004501 1.2e-112 410.6 347 61.7
Nitab4.5_0004420g0040 Nicotiana tabacum HOM05D004071 ORTHO05D004501 2.0e-112 409.8 351 62.4
CDE08G1388 Ceratophyllum demersum HOM05D004071 ORTHO05D004501 4.6e-112 408.7 345 57.7
Os05g0589000 Oryza sativa ssp. japonica HOM05D004071 ORTHO05D004501 5.9e-112 408.3 353 60.9
Potri.017G110600 Populus trichocarpa HOM05D004071 ORTHO05D004501 5.9e-112 408.3 347 60.8
AT3G02420 Arabidopsis thaliana HOM05D004071 ORTHO05D004501 7.8e-112 407.9 348 62.1
Rhsim10G0064500 Rhododendron simsii HOM05D004071 ORTHO05D004501 1.3e-111 407.1 344 59.6
Sabra04G0076900 Salix brachista HOM05D004071 ORTHO05D004501 1.7e-111 406.8 447 50.6
Thhalv10021061m.g Eutrema salsugineum HOM05D004071 ORTHO05D004501 2.3e-111 406.4 344 61.6
unitig_32.g10761 Utricularia gibba HOM05D004071 ORTHO05D004501 3.9e-111 405.6 351 66.7
BcaC05g30354 Brassica carinata HOM05D004071 ORTHO05D004501 8.6e-111 404.4 344 58.1
AUR62014550 Chenopodium quinoa HOM05D004071 ORTHO05D004501 3.3e-110 402.5 359 61.0
Aa31LG5G12930 Aethionema arabicum HOM05D004071 ORTHO05D004501 4.3e-110 402.1 347 61.4
TWI77G0983 Tripterygium wilfordii HOM05D004071 ORTHO05D004501 4.3e-110 402.1 347 57.9
PSO017G6828 Papaver somniferum HOM05D004071 ORTHO05D004501 5.6e-110 401.7 346 55.2
PGSC0003DMG400010091 Solanum tuberosum HOM05D004071 ORTHO05D004501 5.6e-110 401.7 347 59.7
Nn4g23653 Nelumbo nucifera HOM05D004071 ORTHO05D004501 1.2e-109 400.6 307 73.0
Zm00001eb297500 Zea mays HOM05D004071 ORTHO05D004501 1.6e-109 400.2 349 63.3
Sp3g01460 Schrenkiella parvula HOM05D004071 ORTHO05D004501 2.1e-109 399.8 343 59.2
BraA05t23141Z Brassica rapa HOM05D004071 ORTHO05D004501 8.0e-109 397.9 345 58.0
PSO478G0222 Papaver somniferum HOM05D004071 ORTHO05D004501 8.0e-109 397.9 343 54.2
CDE06G1497 Ceratophyllum demersum HOM05D004071 ORTHO05D004501 1.5e-107 393.7 345 62.9
HPP92_003788 Vanilla planifolia HOM05D004071 ORTHO05D004501 7.5e-107 391.3 348 56.0
SEGI_38032 Sequoiadendron giganteum HOM05D004071 ORTHO05D004501 1.3e-106 390.6 340 62.9
CSS0021599 Camellia sinensis var. sinensis HOM05D004071 ORTHO05D004501 1.7e-106 390.2 229 78.6
ClCG05G012000 Citrullus lanatus HOM05D004071 ORTHO05D004501 8.3e-106 387.9 348 54.6
vmacro18101 Vaccinium macrocarpon HOM05D004071 ORTHO05D004501 8.3e-106 387.9 346 56.4
PGR004G2426 Punica granatum HOM05D004071 ORTHO05D004501 3.0e-103 379.4 293 67.2
Sed0014814 Sechium edule HOM05D004071 ORTHO05D004501 1.9e-102 376.7 348 53.7
Hund16109 Selenicereus undatus HOM05D004071 ORTHO05D004501 1.9e-102 376.7 351 56.7
Glyma.19G043700 Glycine max HOM05D004071 ORTHO05D004501 1.3e-98 364.0 291 65.3
vmacro05581 Vaccinium macrocarpon HOM05D004071 ORTHO05D004501 1.3e-98 364.0 430 54.2
Nitab4.5_0009272g0060 Nicotiana tabacum HOM05D004071 ORTHO05D004501 6.6e-95 351.7 359 56.0
TAR371G1199 Trochodendron aralioides HOM05D004071 ORTHO05D004501 1.8e-92 343.6 293 59.7
AL3G11710 Arabidopsis lyrata HOM05D004071 ORTHO05D004501 4.1e-89 332.4 302 57.6
AagrBONN_evm.TU.Sc2ySwM_117.1813 Anthoceros agrestis HOM05D004071 ORTHO05D004501 4.6e-88 328.9 337 47.5
Peaxi162Scf00479g00310 Petunia axillaris HOM05D004071 ORTHO05D004501 7.8e-88 328.2 295 66.1
Sc10g0001400 Simmondsia chinensis HOM05D004071 ORTHO05D004501 2.5e-86 323.2 247 69.2
BolC5t35082H Brassica oleracea HOM05D004071 ORTHO05D007018 9.6e-86 321.2 326 52.8
ATR0730G004 Amborella trichopoda HOM05D004071 ORTHO05D004501 2.8e-85 319.7 280 66.1
SMO164G0101 Selaginella moellendorffii HOM05D004071 ORTHO05D004501 8.1e-85 318.2 341 49.6
QL02p053393 Quercus lobata HOM05D004071 ORTHO05D004501 1.2e-83 314.3 247 70.0
Eucgr.I02122 Eucalyptus grandis HOM05D004071 ORTHO05D004501 3.4e-83 312.8 245 68.6
Mapoly0013s0171 Marchantia polymorpha HOM05D004071 ORTHO05D004501 3.8e-82 309.3 346 41.9
Pp3c7_9290 Physcomitrium patens HOM05D004071 ORTHO05D004501 8.4e-82 308.1 337 47.8
Dinv33918 Davidia involucrata HOM05D004071 ORTHO05D004501 5.4e-81 305.4 187 77.0
Gohir.A13G091200 Gossypium hirsutum HOM05D004071 ORTHO05D004501 1.6e-80 303.9 218 68.8
Nitab4.5_0000612g0160 Nicotiana tabacum HOM05D004071 ORTHO05D004501 3.0e-79 299.7 349 47.6
arahy.Tifrunner.gnm1.ann1.2VHL38 Arachis hypogaea HOM05D004071 ORTHO05D004501 4.3e-78 295.8 245 58.8
C09p75710 Brassica napus HOM05D002308 ORTHO05D002535 4.3e-78 295.8 280 54.6
A05p45210 Brassica napus HOM05D002308 ORTHO05D007018 7.3e-78 295.0 280 54.6
Lj7A9T84 Lonicera japonica HOM05D004071 ORTHO05D004501 3.6e-77 292.7 226 66.4
Zm00001eb158750 Zea mays HOM05D004071 ORTHO05D004501 2.2e-74 283.5 232 56.9
Os01g0641700 Oryza sativa ssp. japonica HOM05D004071 ORTHO05D004501 3.9e-71 272.7 232 55.6
CDE05G2628 Ceratophyllum demersum HOM05D004071 ORTHO05D004501 1.3e-69 267.7 230 54.3
DCAR_010977 Daucus carota HOM05D004071 ORTHO05D004501 2.4e-68 263.5 340 45.6
BraSC141t45626Z Brassica rapa HOM05D004071 ORTHO05D004501 2.0e-67 260.4 245 54.3
BolC1t05906H Brassica oleracea HOM05D004071 ORTHO05D004501 1.3e-63 247.7 241 52.7
BNapus_Darmor_BZH_scaffold_208p00070 Brassica napus HOM05D004071 ORTHO05D004501 3.0e-63 246.5 245 59.2
TPR.G28780 Trifolium pratense HOM05D004071 ORTHO05D004501 7.4e-62 241.9 145 76.6
SHI25579 Sapria himalayana HOM05D004071 ORTHO05D004501 2.4e-60 236.9 229 51.1
Nitab4.5_0003161g0040 Nicotiana tabacum HOM05D004071 ORTHO05D004501 7.1e-57 225.3 130 79.2
Gohir.A03G111050 Gossypium hirsutum HOM05D004071 ORTHO05D004501 1.7e-45 187.6 140 67.1
Gohir.A04G081800 Gossypium hirsutum HOM05D004071 ORTHO05D004501 1.9e-41 174.1 115 73.9
Gohir.A13G168300 Gossypium hirsutum HOM05D004071 ORTHO05D004501 9.4e-41 171.8 112 75.0
unitig_52.g17623 Utricularia gibba HOM05D004071 ORTHO05D004501 9.4e-41 171.8 143 60.8
QL02p053385 Quercus lobata HOM05D004071 ORTHO05D004501 8.8e-39 165.2 105 71.4
Dinv33917 Davidia involucrata HOM05D004071 ORTHO05D004501 1.4e-28 131.3 78 73.1
Actinidia17620 Actinidia chinensis HOM05D004071 ORTHO05D004501 1.2e-24 118.2 73 68.5
CBR_g39496 Chara braunii HOM05D004071 ORTHO05D004501 4.7e-24 116.3 145 37.2
Solyc02g089780.3 Solanum lycopersicum HOM05D004071 ORTHO05D004501 4.8e-21 106.3 347 24.5
SEGI_19153 Sequoiadendron giganteum HOM05D004071 ORTHO05D004501 3.2e-17 93.6 55 67.3
Gohir.A10G225466 Gossypium hirsutum HOM05D004071 ORTHO05D004501 8.8e-15 85.5 57 70.2
Cre02.g099650 Chlamydomonas reinhardtii HOM05D004071 ORTHO05D004501 1.2e-14 85.1 220 28.2
arahy.Tifrunner.gnm1.ann1.FI956K Arachis hypogaea HOM05D004071 ORTHO05D004501 3.5e-11 73.6 97 40.2
HanXRQChr02g0053871 Helianthus annuus HOM05D004071 ORTHO05D004501 8.6e-10 68.9 103 40.8
BcaC02g08620 Brassica carinata HOM05D004071 ORTHO05D004501 1.0e-07 62.0 38 76.3


User provided reference genes

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