Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H00527 Erythranthe guttata HOM05D004326 ORTHO05D004570 1.1e-18 95.5 47 100.0
Migut.K00857 Erythranthe guttata HOM05D004326 ORTHO05D004570 4.0e-11 70.5 38 84.2
CAN.G93.32 Capsicum annuum HOM05D004326 ORTHO05D004570 5.2e-11 70.1 50 70.0
Solyc02g065570.1 Solanum lycopersicum HOM05D004326 ORTHO05D004570 4.4e-10 67.0 51 64.7
CAN.G497.3 Capsicum annuum HOM05D004326 ORTHO05D004570 5.7e-10 66.6 36 83.3
Gohir.A07G168701 Gossypium hirsutum HOM05D004326 ORTHO05D004570 1.7e-09 65.1 39 71.8
Gohir.D07G179500 Gossypium hirsutum HOM05D004326 ORTHO05D004570 1.7e-09 65.1 39 71.8
Gorai.001G200500 Gossypium raimondii HOM05D004326 ORTHO05D004570 1.7e-09 65.1 39 71.8
Gohir.D13G069701 Gossypium hirsutum HOM05D004326 ORTHO05D004570 4.8e-09 63.5 47 61.7
Carub.0006s1421 Capsella rubella HOM05D004326 ORTHO05D004570 6.3e-09 63.2 51 62.7
FvH4_6g45391 Fragaria vesca HOM05D004326 ORTHO05D004570 6.3e-09 63.2 34 79.4
FAN14G2544 Fragaria x ananassa HOM05D004326 ORTHO05D004570 6.3e-09 63.2 34 79.4
FAN14G3188 Fragaria x ananassa HOM05D004326 ORTHO05D004570 6.3e-09 63.2 34 79.4
Gohir.A13G053100 Gossypium hirsutum HOM05D004326 ORTHO05D004570 6.3e-09 63.2 47 61.7
Potri.008G116700 Populus trichocarpa HOM05D004326 ORTHO05D004570 6.3e-09 63.2 47 59.6
Potri.017G112100 Populus trichocarpa HOM05D004326 ORTHO05D004570 6.3e-09 63.2 39 66.7
Thecc.02G361000 Theobroma cacao HOM05D004326 ORTHO05D004570 6.3e-09 63.2 47 63.8
Duzib138G0964 Durio zibethinus HOM05D004326 ORTHO05D004570 8.3e-09 62.8 39 66.7
Glyma.20G185900 Glycine max HOM05D004326 ORTHO05D004570 8.3e-09 62.8 47 68.1
CARHR013620 Cardamine hirsuta HOM05D004326 ORTHO05D004570 1.1e-08 62.4 48 64.6
Potri.004G102950 Populus trichocarpa HOM05D004326 ORTHO05D004570 1.1e-08 62.4 36 72.2
THA.LOC109117071 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 1.1e-08 62.4 38 73.7
CiPaw.03G059200 Carya illinoinensis HOM05D004326 ORTHO05D004570 1.4e-08 62.0 36 72.2
Glyma.08G256500 Glycine max HOM05D004326 ORTHO05D004570 1.4e-08 62.0 36 72.2
Phvul.008G020301 Phaseolus vulgaris HOM05D004326 ORTHO05D004570 1.4e-08 62.0 36 72.2
CAN.G184.91 Capsicum annuum HOM05D004326 ORTHO05D004570 1.8e-08 61.6 47 63.8
Thhalv10015386m.g Eutrema salsugineum HOM05D004326 ORTHO05D004570 1.8e-08 61.6 36 69.4
Manes.14G097600 Manihot esculenta HOM05D004326 ORTHO05D004570 1.8e-08 61.6 47 61.7
CANSAT64G1998 Cannabis sativa HOM05D004326 ORTHO05D004570 2.4e-08 61.2 39 71.8
Glyma.10G204600 Glycine max HOM05D004326 ORTHO05D004570 2.4e-08 61.2 47 66.0
Glyma.18G280800 Glycine max HOM05D004326 ORTHO05D004570 2.4e-08 61.2 49 59.2
Duzib251G0285 Durio zibethinus HOM05D004326 ORTHO05D004570 3.1e-08 60.8 47 59.6
Gohir.D12G173600 Gossypium hirsutum HOM05D004326 ORTHO05D004570 3.1e-08 60.8 39 69.2
Gorai.008G186200 Gossypium raimondii HOM05D004326 ORTHO05D004570 3.1e-08 60.8 39 69.2
THA.LOC104805244 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 3.1e-08 60.8 47 63.8
THA.LOC104825713 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 3.1e-08 60.8 47 63.8
C03p08740 Brassica napus HOM05D004326 ORTHO05D004570 4.1e-08 60.5 44 63.6
BolC3t13372H Brassica oleracea HOM05D004326 ORTHO05D004570 4.1e-08 60.5 44 63.6
Gohir.A12G170400 Gossypium hirsutum HOM05D004326 ORTHO05D004570 4.1e-08 60.5 39 66.7
Potri.010G129600 Populus trichocarpa HOM05D004326 ORTHO05D004570 4.1e-08 60.5 47 57.4
Thecc.04G138400 Theobroma cacao HOM05D004326 ORTHO05D004570 4.1e-08 60.5 38 63.2
TWI12G0968 Tripterygium wilfordii HOM05D004326 ORTHO05D004570 4.1e-08 60.5 47 61.7
AL1G24940 Arabidopsis lyrata HOM05D004326 ORTHO05D004570 5.4e-08 60.1 41 65.9
AT1G13245 Arabidopsis thaliana HOM05D004326 ORTHO05D004570 5.4e-08 60.1 41 65.9
A10p23030 Brassica napus HOM05D004326 ORTHO05D004570 5.4e-08 60.1 45 55.6
BolC9t58947H Brassica oleracea HOM05D004326 ORTHO05D004570 5.4e-08 60.1 45 55.6
BraA10t44372Z Brassica rapa HOM05D004326 ORTHO05D004570 5.4e-08 60.1 45 55.6
CANSAT64G0444 Cannabis sativa HOM05D004326 ORTHO05D004570 5.4e-08 60.1 43 69.8
Carub.0002s1354 Capsella rubella HOM05D004326 ORTHO05D004570 5.4e-08 60.1 40 65.0
CiPaw.15G003600 Carya illinoinensis HOM05D004326 ORTHO05D004570 5.4e-08 60.1 47 59.6
Manes.06G072200 Manihot esculenta HOM05D004326 ORTHO05D004570 5.4e-08 60.1 39 69.2
Phvul.007G102250 Phaseolus vulgaris HOM05D004326 ORTHO05D004570 5.4e-08 60.1 47 61.7
RcHm_v2.0_Chr2g0163211 Rosa chinensis HOM05D004326 ORTHO05D004570 5.4e-08 60.1 34 76.5
THA.LOC109116378 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 5.4e-08 60.1 38 65.8
TWI56G0546 Tripterygium wilfordii HOM05D004326 ORTHO05D004570 5.4e-08 60.1 47 57.4
Carub.0001s1297 Capsella rubella HOM05D004326 ORTHO05D004570 7.0e-08 59.7 39 66.7
Prupe.3G240100 Prunus persica HOM05D004326 ORTHO05D004570 7.0e-08 59.7 45 60.0
THA.LOC109116985 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 7.0e-08 59.7 38 65.8
Atru.chr11.1355 Acer truncatum HOM05D004326 ORTHO05D004570 9.1e-08 59.3 49 59.2
AT1G67265 Arabidopsis thaliana HOM05D004326 ORTHO05D004570 1.2e-07 58.9 40 62.5
Duzib268G0802 Durio zibethinus HOM05D004326 ORTHO05D004570 1.2e-07 58.9 47 57.4
Lalb_Chr17g0336511 Lupinus albus HOM05D004326 ORTHO05D004570 1.2e-07 58.9 36 66.7
MD16G1048200 Malus domestica HOM05D004326 ORTHO05D004570 1.2e-07 58.9 51 64.7
A06p08510 Brassica napus HOM05D004326 ORTHO05D004570 1.6e-07 58.5 48 60.4
C05p10110 Brassica napus HOM05D004326 ORTHO05D004570 1.6e-07 58.5 48 60.4
PSO063G2411 Papaver somniferum HOM05D004326 ORTHO05D004570 1.6e-07 58.5 47 61.7
PSO782G5714 Papaver somniferum HOM05D004326 ORTHO05D004570 1.6e-07 58.5 47 61.7
A08p32390 Brassica napus HOM05D004326 ORTHO05D004570 2.0e-07 58.2 39 66.7
BolC5t29757H Brassica oleracea HOM05D004326 ORTHO05D004570 2.0e-07 58.2 39 66.7
BraA06t24046Z Brassica rapa HOM05D004326 ORTHO05D004570 2.0e-07 58.2 39 66.7
BraA08t35162Z Brassica rapa HOM05D004326 ORTHO05D004570 2.0e-07 58.2 39 66.7
MD13G1046500 Malus domestica HOM05D004326 ORTHO05D004570 2.0e-07 58.2 51 62.7
PSO478G3685 Papaver somniferum HOM05D004326 ORTHO05D004570 2.0e-07 58.2 43 69.8
PGR042G3431 Punica granatum HOM05D004326 ORTHO05D004570 2.0e-07 58.2 34 70.6
Eucgr.G02348 Eucalyptus grandis HOM05D004326 ORTHO05D004570 2.7e-07 57.8 39 66.7
Glyma.10G129200 Glycine max HOM05D004326 ORTHO05D004570 2.7e-07 57.8 47 66.0
Manes.02G066501 Manihot esculenta HOM05D004326 ORTHO05D004570 2.7e-07 57.8 47 51.1
Oeu058414.1 Olea europaea HOM05D004326 ORTHO05D004570 2.7e-07 57.8 48 56.2
PGR119G2456 Punica granatum HOM05D004326 ORTHO05D004570 2.7e-07 57.8 47 59.6
A03p07530 Brassica napus HOM05D004326 ORTHO05D004570 3.5e-07 57.4 45 55.6
BolC8t49226H Brassica oleracea HOM05D004326 ORTHO05D004570 3.5e-07 57.4 39 66.7
BraA03t10081Z Brassica rapa HOM05D004326 ORTHO05D004570 3.5e-07 57.4 45 55.6
MELO3C008521.2 Cucumis melo HOM05D004326 ORTHO05D004570 3.5e-07 57.4 48 60.4
AT3G02493 Arabidopsis thaliana HOM05D004326 ORTHO05D004570 4.5e-07 57.0 36 66.7
CiPaw.15G127400 Carya illinoinensis HOM05D004326 ORTHO05D004570 4.5e-07 57.0 47 55.3
Lalb_Chr06g0170221 Lupinus albus HOM05D004326 ORTHO05D004570 4.5e-07 57.0 48 56.2
MD09G1083800 Malus domestica HOM05D004326 ORTHO05D004570 4.5e-07 57.0 40 60.0
PGR083G2212 Punica granatum HOM05D004326 ORTHO05D004570 4.5e-07 57.0 44 63.6
Lalb_Chr02g0151761 Lupinus albus HOM05D004326 ORTHO05D004570 5.9e-07 56.6 46 54.3
PSO017G5195 Papaver somniferum HOM05D004326 ORTHO05D004570 5.9e-07 56.6 42 66.7
AL6G26900 Arabidopsis lyrata HOM05D004326 ORTHO05D004570 7.7e-07 56.2 36 66.7
C02p08120 Brassica napus HOM05D004326 ORTHO05D004570 1.0e-06 55.8 46 56.5
C08p16040 Brassica napus HOM05D004326 ORTHO05D004570 1.0e-06 55.8 39 64.1
Manes.01G107900 Manihot esculenta HOM05D004326 ORTHO05D004570 1.0e-06 55.8 49 53.1
Prupe.1G305400 Prunus persica HOM05D004326 ORTHO05D004570 1.0e-06 55.8 39 66.7
PGSC0003DMG400007475 Solanum tuberosum HOM05D004326 ORTHO05D004570 1.0e-06 55.8 35 71.4
TWI79G1601 Tripterygium wilfordii HOM05D004326 ORTHO05D004570 1.0e-06 55.8 49 61.2
CARHR197290 Cardamine hirsuta HOM05D004326 ORTHO05D004570 1.3e-06 55.5 45 55.6
PGR102G0365 Punica granatum HOM05D004326 ORTHO05D004570 1.3e-06 55.5 40 67.5
TWI31G0110 Tripterygium wilfordii HOM05D004326 ORTHO05D004570 1.3e-06 55.5 41 65.9
AT5G16023 Arabidopsis thaliana HOM05D004326 ORTHO05D004570 1.7e-06 55.1 52 55.8
Duzib068G0156 Durio zibethinus HOM05D004326 ORTHO05D004570 1.7e-06 55.1 47 51.1
Glyma.02G099000 Glycine max HOM05D004326 ORTHO05D004570 1.7e-06 55.1 35 68.6
Lalb_Chr10g0099751 Lupinus albus HOM05D004326 ORTHO05D004570 1.7e-06 55.1 50 60.0
THA.LOC109117262 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 1.7e-06 55.1 45 51.1
BolC2t06734H Brassica oleracea HOM05D004326 ORTHO05D004570 2.2e-06 54.7 46 54.3
THA.LOC109116167 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 2.2e-06 54.7 39 59.0
TWI81G0420 Tripterygium wilfordii HOM05D004326 ORTHO05D004570 2.2e-06 54.7 48 60.4
A02p03350 Brassica napus HOM05D004326 ORTHO05D004570 2.9e-06 54.3 46 54.3
BraA02t05306Z Brassica rapa HOM05D004326 ORTHO05D004570 2.9e-06 54.3 46 54.3
Medtr1g093650 Medicago truncatula HOM05D004326 ORTHO05D004570 2.9e-06 54.3 47 63.8
A03p32970 Brassica napus HOM05D004326 ORTHO05D004570 3.8e-06 53.9 36 63.9
C03p40100 Brassica napus HOM05D004326 ORTHO05D004570 3.8e-06 53.9 36 63.9
C06p43000 Brassica napus HOM05D004326 ORTHO05D004570 3.8e-06 53.9 31 71.0
BolC3t16276H Brassica oleracea HOM05D004326 ORTHO05D004570 3.8e-06 53.9 36 63.9
BolC6t39135H Brassica oleracea HOM05D004326 ORTHO05D004570 3.8e-06 53.9 31 71.0
BraA03t12465Z Brassica rapa HOM05D004326 ORTHO05D004570 3.8e-06 53.9 36 63.9
BraA07t31013Z Brassica rapa HOM05D004326 ORTHO05D004570 3.8e-06 53.9 36 63.9
CARHR076480 Cardamine hirsuta HOM05D004326 ORTHO05D004570 3.8e-06 53.9 36 63.9
Migut.K01265 Erythranthe guttata HOM05D004326 ORTHO05D004570 5.0e-06 53.5 38 65.8
Glyma.01G088000 Glycine max HOM05D004326 ORTHO05D004570 5.0e-06 53.5 48 56.2
Glyma.02G100100 Glycine max HOM05D004326 ORTHO05D004570 5.0e-06 53.5 48 56.2
Sed0007568 Sechium edule HOM05D042516 ORTHO05D004570 6.5e-06 53.1 46 52.2
TWI60G1416 Tripterygium wilfordii HOM05D004326 ORTHO05D004570 6.5e-06 53.1 48 56.2
AL3G11830 Arabidopsis lyrata HOM05D004326 ORTHO05D004570 8.5e-06 52.8 36 63.9
Lalb_Chr17g0341881 Lupinus albus HOM05D004326 ORTHO05D004570 8.5e-06 52.8 41 58.5


User provided reference genes

Program Settings