Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H00525 Erythranthe guttata HOM05D007242 ORTHO05D009089 9.2e-243 843.6 577 100.0
MSTRG.2935 Avicennia marina HOM05D007242 ORTHO05D009089 2.6e-144 516.5 578 73.2
SGA_v2.0_scaffold204G41644 Striga asiatica HOM05D007242 ORTHO05D009089 1.2e-133 481.1 577 68.5
SalBow1G2223 Salvia bowleyana HOM05D007242 ORTHO05D009089 4.4e-128 462.6 522 73.6
Oeu038867.1 Olea europaea HOM05D007242 ORTHO05D009089 6.0e-117 425.6 512 67.2
Hma1.2p1_0939F.1_g239400 Hydrangea macrophylla HOM05D007242 ORTHO05D009089 8.3e-111 405.2 593 61.6
CSS0024550 Camellia sinensis var. sinensis HOM05D007242 ORTHO05D009089 1.6e-109 401.0 591 61.6
Lj2A917T62 Lonicera japonica HOM05D007242 ORTHO05D009089 1.8e-105 387.5 604 49.8
Solyc01g008480.4 Solanum lycopersicum HOM05D007242 ORTHO05D009089 1.3e-103 381.3 591 60.1
Lj2C896T5 Lonicera japonica HOM05D007242 ORTHO05D009089 3.7e-103 379.8 544 52.6
Hma1.2p1_0268F.1_g107710 Hydrangea macrophylla HOM05D007242 ORTHO05D009089 6.4e-103 379.0 591 61.3
Sopen01g004000 Solanum pennellii HOM05D007242 ORTHO05D009089 6.4e-103 379.0 591 60.2
GSVIVG01019029001 Vitis vinifera HOM05D007242 ORTHO05D009089 3.5e-101 373.2 564 55.9
Haze_18840 Corylus avellana HOM05D007242 ORTHO05D009089 1.0e-100 371.7 557 62.3
Rhsim08G0035000 Rhododendron simsii HOM05D007242 ORTHO05D009089 3.0e-100 370.2 588 59.7
HanXRQChr14g0431951 Helianthus annuus HOM05D007242 ORTHO05D009089 6.6e-100 369.0 582 60.3
Manes.13G136000 Manihot esculenta HOM05D007242 ORTHO05D009089 6.6e-100 369.0 582 60.5
MD15G1269300 Malus domestica HOM05D007242 ORTHO05D009089 9.5e-99 365.2 584 58.0
CAN.G1204.3 Capsicum annuum HOM05D007242 ORTHO05D009089 3.6e-98 363.2 605 49.8
Prupe.7G148400 Prunus persica HOM05D007242 ORTHO05D009089 6.2e-98 362.5 585 58.6
Potri.005G127500 Populus trichocarpa HOM05D007242 ORTHO05D009089 1.1e-97 361.7 551 61.7
CiPaw.15G142800 Carya illinoinensis HOM05D007242 ORTHO05D009089 1.8e-97 360.9 556 62.4
Thecc.01G042000 Theobroma cacao HOM05D007242 ORTHO05D009089 4.0e-97 359.8 541 61.7
Duzib264G0124 Durio zibethinus HOM05D007242 ORTHO05D009089 8.9e-97 358.6 552 61.6
Gohir.A11G044400 Gossypium hirsutum HOM05D007242 ORTHO05D009089 1.5e-96 357.8 557 61.8
Atru.chr3.510 Acer truncatum HOM05D007242 ORTHO05D009089 4.4e-96 356.3 588 45.7
Cc07_g05120 Coffea canephora HOM05D007242 ORTHO05D009089 4.4e-96 356.3 590 60.5
Gorai.007G051500 Gossypium raimondii HOM05D007242 ORTHO05D009089 4.4e-96 356.3 554 61.9
Nitab4.5_0010783g0030 Nicotiana tabacum HOM05D007242 ORTHO05D009089 4.4e-96 356.3 589 58.9
QL12p024714 Quercus lobata HOM05D007242 ORTHO05D009089 4.4e-96 356.3 514 64.2
Peaxi162Scf00075g00618 Petunia axillaris HOM05D007242 ORTHO05D009089 9.9e-96 355.1 518 63.7
DCAR_026265 Daucus carota HOM05D007242 ORTHO05D009089 1.7e-95 354.4 591 57.5
CANSAT35G0651 Cannabis sativa HOM05D007242 ORTHO05D009089 1.9e-94 350.9 533 61.7
Psat4g001600 Pisum sativum HOM05D007242 ORTHO05D009089 3.2e-94 350.1 559 58.5
TAR381G0682 Trochodendron aralioides HOM05D007242 ORTHO05D009089 7.1e-94 349.0 553 61.3
Ciclev10027297m.g Citrus clementina HOM05D007242 ORTHO05D009089 6.0e-93 345.9 515 54.4
Sabra05G0104300 Salix brachista HOM05D007242 ORTHO05D009089 1.9e-91 340.9 616 45.0
vmacro23494 Vaccinium macrocarpon HOM05D007242 ORTHO05D009089 3.3e-91 340.1 516 64.1
Glyma.05G246000 Glycine max HOM05D007242 ORTHO05D009089 5.6e-91 339.3 546 57.9
Lalb_Chr05g0221691 Lupinus albus HOM05D007242 ORTHO05D009089 9.6e-91 338.6 574 58.0
Medtr8g107230 Medicago truncatula HOM05D007242 ORTHO05D009089 2.8e-90 337.0 521 52.4
Phvul.002G329700 Phaseolus vulgaris HOM05D007242 ORTHO05D009089 2.8e-90 337.0 537 61.3
VMungo0251G2211 Vigna mungo HOM05D007242 ORTHO05D009089 1.4e-89 334.7 582 57.2
arahy.Tifrunner.gnm1.ann1.79NCEV Arachis hypogaea HOM05D007242 ORTHO05D009089 4.0e-89 333.2 525 53.1
TWI53G0783 Tripterygium wilfordii HOM05D007242 ORTHO05D009089 4.0e-89 333.2 587 58.8
Lsat_1_v5_gn_2_38041 Lactuca sativa HOM05D007242 ORTHO05D009089 1.2e-88 331.6 588 57.5
Nn1g05103 Nelumbo nucifera HOM05D007242 ORTHO05D009089 2.6e-88 330.5 556 59.5
TPR.G15492 Trifolium pratense HOM05D007242 ORTHO05D009089 4.4e-88 329.7 575 56.0
Aqoxy6G01016 Aquilegia oxysepala HOM05D007242 ORTHO05D009089 1.7e-87 327.8 562 56.6
Peaxi162Scf00075g00617 Petunia axillaris HOM05D007242 ORTHO05D009089 2.9e-87 327.0 544 61.2
arahy.Tifrunner.gnm1.ann1.YZC3AP Arachis hypogaea HOM05D007242 ORTHO05D009089 4.9e-87 326.2 525 51.0
Dinv26797 Davidia involucrata HOM05D007242 ORTHO05D009089 2.4e-86 323.9 467 67.9
Thhalv10000833m.g Eutrema salsugineum HOM05D007242 ORTHO05D009089 7.8e-85 318.9 542 56.8
BraA06t27320Z Brassica rapa HOM05D007242 ORTHO05D009089 1.3e-84 318.2 538 56.9
THA.LOC104819810 Tarenaya hassleriana HOM05D007242 ORTHO05D009089 3.9e-84 316.6 540 59.1
BcaC06g31314 Brassica carinata HOM05D007242 ORTHO05D009089 5.1e-84 316.2 548 55.7
A06p44470 Brassica napus HOM05D007242 ORTHO05D009089 5.1e-84 316.2 538 56.7
BcaC06g34194 Brassica carinata HOM05D007242 ORTHO05D009089 6.6e-84 315.8 553 55.0
PGR102G1679 Punica granatum HOM05D007242 ORTHO05D009089 1.5e-83 314.7 548 57.7
C07p31760 Brassica napus HOM05D007242 ORTHO05D009089 1.9e-83 314.3 553 55.3
BolC7t43717H Brassica oleracea HOM05D007242 ORTHO05D009089 3.3e-83 313.5 553 55.3
Hund14133 Selenicereus undatus HOM05D007242 ORTHO05D009089 4.3e-83 313.2 532 60.5
Eucgr.B03084 Eucalyptus grandis HOM05D007242 ORTHO05D009089 9.6e-83 312.0 515 60.6
Sp2g12820 Schrenkiella parvula HOM05D007242 ORTHO05D009089 1.6e-82 311.2 556 55.2
AL5G10350 Arabidopsis lyrata HOM05D007242 ORTHO05D009089 2.1e-82 310.8 556 56.1
AT2G01390 Arabidopsis thaliana HOM05D007242 ORTHO05D009089 1.8e-81 307.8 555 56.6
Aa31LG2G8550 Aethionema arabicum HOM05D007242 ORTHO05D009089 3.1e-81 307.0 530 56.8
Carub.0005s0035 Capsella rubella HOM05D007242 ORTHO05D009089 9.0e-81 305.4 539 56.0
MBI16_g13145_MAGBIO Magnolia biondii HOM05D007242 ORTHO05D009089 3.4e-80 303.5 514 60.9
ClCG02G013250 Citrullus lanatus HOM05D007242 ORTHO05D009089 8.4e-79 298.9 566 53.4
MELO3C020940.2 Cucumis melo HOM05D007242 ORTHO05D009089 1.1e-78 298.5 566 52.8
CsaV3_2G017430 Cucumis sativus L. HOM05D007242 ORTHO05D009089 1.9e-78 297.7 566 53.0
EL10Ac6g14891 Beta vulgaris HOM05D007242 ORTHO05D009089 2.1e-77 294.3 565 57.0
Sed0022143 Sechium edule HOM05D007242 ORTHO05D009089 1.8e-76 291.2 555 53.3
HanXRQChr07g0193491 Helianthus annuus HOM05D007242 ORTHO05D009089 8.4e-71 272.3 474 52.7
AUR62008019 Chenopodium quinoa HOM05D007242 ORTHO05D009089 1.4e-70 271.6 552 55.6
ATR0767G228 Amborella trichopoda HOM05D007242 ORTHO05D009089 2.5e-67 260.8 549 54.8
Nitab4.5_0008184g0020 Nicotiana tabacum HOM05D007242 ORTHO05D009089 7.4e-67 259.2 272 50.4
ECA246G4655 Erigeron canadensis HOM05D007242 ORTHO05D009089 9.0e-57 225.7 275 46.5
CARHR143900 Cardamine hirsuta HOM05D007242 ORTHO05D009089 2.5e-54 217.6 293 43.3
COL.COLO4_04840 Corchorus olitorius HOM05D007242 ORTHO05D009089 6.1e-53 213.0 255 45.9
Zm00001eb288630 Zea mays HOM05D007242 ORTHO05D009089 1.1e-51 208.8 545 42.2
Os10g0358700 Oryza sativa ssp. japonica HOM05D007242 ORTHO05D009089 5.3e-49 199.9 520 43.5
Gohir.D11G047900 Gossypium hirsutum HOM05D007242 ORTHO05D009089 2.0e-48 198.0 408 65.0
A06p37220 Brassica napus HOM05D007242 ORTHO05D009089 5.9e-48 196.4 271 42.1
BraA06t26646Z Brassica rapa HOM05D007242 ORTHO05D009089 1.7e-47 194.9 271 41.7
Glyma.08G053933 Glycine max HOM05D007242 ORTHO05D009089 1.9e-46 191.4 225 48.0
MD02G1154900 Malus domestica HOM05D007242 ORTHO05D009089 4.1e-41 173.7 393 31.8
CDE07G1297 Ceratophyllum demersum HOM05D007242 ORTHO05D009089 1.2e-37 162.2 302 74.5
vmacro22084 Vaccinium macrocarpon HOM05D007242 ORTHO05D009089 3.6e-37 160.6 264 38.6
COL.COLO4_22144 Corchorus olitorius HOM05D007242 ORTHO05D009089 1.3e-34 152.1 102 65.7
CARHR143890 Cardamine hirsuta HOM05D007242 ORTHO05D009089 9.1e-33 146.0 100 65.0
AUR62003202 Chenopodium quinoa HOM05D007242 ORTHO05D009089 1.0e-31 142.5 267 34.1
Glyma.08G053867 Glycine max HOM05D007242 ORTHO05D009089 2.7e-29 134.4 100 62.0
HPP92_006079 Vanilla planifolia HOM05D007242 ORTHO05D009089 5.2e-28 130.2 180 39.4
AT2G01360 Arabidopsis thaliana HOM05D007242 ORTHO05D009089 2.2e-23 114.8 167 38.3
HanXRQChr14g0431911 Helianthus annuus HOM05D007242 ORTHO05D009089 9.8e-19 99.4 161 41.6
Lj4C132T2 Lonicera japonica HOM05D007242 ORTHO05D009089 2.4e-17 94.7 92 51.1
EL10Ac4g08697 Beta vulgaris HOM05D007242 ORTHO05D009089 1.5e-14 85.5 133 36.8
BcaC06g34182 Brassica carinata HOM05D007242 ORTHO05D009089 2.3e-12 78.2 103 43.7
BcaB08g34298 Brassica carinata HOM05D007242 ORTHO05D009089 3.4e-11 74.3 91 42.9
BcaC06g34191 Brassica carinata HOM05D007242 ORTHO05D009089 3.7e-10 70.9 117 35.9
CSS0006147 Camellia sinensis var. sinensis HOM05D007242 ORTHO05D009089 6.3e-10 70.1 96 43.8
Zm00001eb348820 Zea mays HOM05D007242 ORTHO05D009089 2.7e-08 64.7 95 37.9
Atru.chr3.508 Acer truncatum HOM05D007242 ORTHO05D009089 5.9e-08 63.5 55 54.5
PSO782G0394 Papaver somniferum HOM05D004079 ORTHO05D005437 7.8e-08 63.2 95 35.8
SEGI_13247 Sequoiadendron giganteum HOM05D000238 ORTHO05D005437 2.9e-07 61.2 92 37.0
AagrBONN_evm.TU.Sc2ySwM_344.1806 Anthoceros agrestis HOM05D000001 ORTHO05D000003 6.6e-07 60.1 154 26.6
Rhsim03G0072800 Rhododendron simsii HOM05D007235 ORTHO05D008985 1.5e-06 58.9 209 27.3
Mapoly0050s0075 Marchantia polymorpha HOM05D004079 ORTHO05D005437 2.5e-06 58.2 114 32.5
C06p48780 Brassica napus HOM05D004079 ORTHO05D005437 3.3e-06 57.8 92 35.9
Sabra15G0091500 Salix brachista HOM05D004079 ORTHO05D005437 3.3e-06 57.8 94 38.3
AagrBONN_evm.TU.Sc2ySwM_117.3400 Anthoceros agrestis HOM05D004079 ORTHO05D005437 4.3e-06 57.4 93 32.3
BolC6t39914H Brassica oleracea HOM05D004079 ORTHO05D005437 4.3e-06 57.4 92 35.9
BcaC08g46901 Brassica carinata HOM05D004079 ORTHO05D005437 5.6e-06 57.0 92 35.9
BcaC08g46918 Brassica carinata HOM05D004079 ORTHO05D005437 5.6e-06 57.0 92 35.9
A07p40430 Brassica napus HOM05D004079 ORTHO05D005437 5.6e-06 57.0 92 35.9
BraA07t31585Z Brassica rapa HOM05D004079 ORTHO05D005437 5.6e-06 57.0 92 35.9
Potri.015G066400 Populus trichocarpa HOM05D004079 ORTHO05D005437 7.3e-06 56.6 89 37.1
Ciclev10011274m.g Citrus clementina HOM05D000001 ORTHO05D000003 9.5e-06 56.2 217 24.0


User provided reference genes

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