Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H00446 Erythranthe guttata HOM05D005929 ORTHO05D007869 0.0e+00 1363.2 696 100.0
MSTRG.23760 Avicennia marina HOM05D005929 ORTHO05D007869 3.0e-296 1021.5 700 76.1
SGA_v2.0_scaffold15G07274 Striga asiatica HOM05D005929 ORTHO05D007869 2.1e-289 998.8 700 75.1
Dinv39868 Davidia involucrata HOM05D005929 ORTHO05D007869 1.1e-258 896.7 708 67.9
CSS0000081 Camellia sinensis var. sinensis HOM05D005929 ORTHO05D007869 1.5e-255 886.3 722 66.9
Manes.12G099700 Manihot esculenta HOM05D005929 ORTHO05D007869 1.0e-251 873.6 726 65.6
Actinidia16503 Actinidia chinensis HOM05D005929 ORTHO05D007869 8.4e-251 870.5 716 65.8
GSVIVG01022148001 Vitis vinifera HOM05D005929 ORTHO05D007869 1.3e-248 863.2 715 65.3
Potri.005G137100 Populus trichocarpa HOM05D005929 ORTHO05D007869 3.3e-247 858.6 709 65.3
Prupe.7G135500 Prunus persica HOM05D005929 ORTHO05D007869 9.7e-247 857.1 726 63.9
MD00G1045200 Malus domestica HOM05D005929 ORTHO05D007869 1.1e-245 853.6 733 63.8
Thecc.01G053700 Theobroma cacao HOM05D005929 ORTHO05D007869 1.8e-245 852.8 717 65.6
TAR628G1297 Trochodendron aralioides HOM05D005929 ORTHO05D007869 9.0e-245 850.5 721 64.1
Ciclev10025029m.g Citrus clementina HOM05D005929 ORTHO05D007869 1.2e-244 850.1 714 64.7
MD02G1169700 Malus domestica HOM05D005929 ORTHO05D007869 7.6e-244 847.4 731 64.6
TPR.G19031 Trifolium pratense HOM05D005929 ORTHO05D007869 1.0e-243 847.0 713 64.5
COL.COLO4_11392 Corchorus olitorius HOM05D005929 ORTHO05D007869 5.0e-243 844.7 717 65.1
ClCG01G016760 Citrullus lanatus HOM05D005929 ORTHO05D007869 8.5e-243 844.0 709 64.3
Cc07_g05890 Coffea canephora HOM05D005929 ORTHO05D007869 1.9e-242 842.8 695 65.5
CsaV3_6G043190 Cucumis sativus L. HOM05D005929 ORTHO05D007869 3.2e-242 842.0 707 64.2
Cfa004003 Carpinus fangiana HOM05D005929 ORTHO05D007869 9.4e-242 840.5 734 62.5
MBI06_g04503_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D007869 1.2e-241 840.1 733 62.9
unitig_899.g14965 Utricularia gibba HOM05D005929 ORTHO05D007869 1.6e-241 839.7 739 63.6
Sabra05G0109600 Salix brachista HOM05D005929 ORTHO05D007869 2.1e-241 839.3 712 63.9
VMungo0251G2155 Vigna mungo HOM05D005929 ORTHO05D007869 6.1e-241 837.8 712 64.0
Lalb_Chr05g0226621 Lupinus albus HOM05D005929 ORTHO05D007869 2.3e-240 835.9 712 64.5
Oeu039068.2 Olea europaea HOM05D005929 ORTHO05D007869 8.8e-240 833.9 733 63.4
MELO3C007555.2 Cucumis melo HOM05D005929 ORTHO05D007869 2.5e-239 832.4 715 63.5
Psat4g087280 Pisum sativum HOM05D005929 ORTHO05D007869 2.5e-239 832.4 712 63.9
Gorai.007G211400 Gossypium raimondii HOM05D005929 ORTHO05D007869 7.4e-239 830.9 713 64.7
Nn1g05837 Nelumbo nucifera HOM05D005929 ORTHO05D007869 9.7e-239 830.5 724 63.0
CANSAT56G1082 Cannabis sativa HOM05D005929 ORTHO05D007869 2.8e-238 828.9 728 63.5
Ca_21176_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 2.8e-238 828.9 707 63.4
RcHm_v2.0_Chr2g0105071 Rosa chinensis HOM05D005929 ORTHO05D007869 3.7e-238 828.6 722 63.7
Phvul.003G244900 Phaseolus vulgaris HOM05D005929 ORTHO05D007869 1.1e-237 827.0 712 63.6
PGR102G2065 Punica granatum HOM05D005929 ORTHO05D007869 1.1e-237 827.0 722 62.6
Glyma.05G084300 Glycine max HOM05D005929 ORTHO05D007869 1.2e-236 823.5 712 62.9
TWI09G0459 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 1.5e-236 823.2 712 64.5
Glyma.17G175900 Glycine max HOM05D005929 ORTHO05D007869 5.9e-236 821.2 715 62.9
Lj4g0006502 Lotus japonicus HOM05D005929 ORTHO05D007869 1.3e-235 820.1 712 63.3
Duzib147G0952 Durio zibethinus HOM05D005929 ORTHO05D007869 2.2e-235 819.3 708 64.1
DCAR_010904 Daucus carota HOM05D005929 ORTHO05D007869 2.9e-235 818.9 725 62.5
EL10Ac6g15157 Beta vulgaris HOM05D005929 ORTHO05D007869 3.8e-235 818.5 721 61.9
Sc03g0001480 Simmondsia chinensis HOM05D005929 ORTHO05D007869 5.0e-235 818.1 701 63.9
TWI53G1997 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 6.5e-235 817.8 705 64.3
Gohir.A11G190800 Gossypium hirsutum HOM05D005929 ORTHO05D007869 8.5e-235 817.4 707 63.6
FvH4_1g15790 Fragaria vesca HOM05D005929 ORTHO05D007869 5.5e-234 814.7 714 62.9
FAN19G1416 Fragaria x ananassa HOM05D005929 ORTHO05D007869 1.2e-233 813.5 714 62.7
FAN28G0152 Fragaria x ananassa HOM05D005929 ORTHO05D007869 1.2e-233 813.5 714 62.7
FAN26G1042 Fragaria x ananassa HOM05D005929 ORTHO05D007869 2.7e-233 812.4 714 62.7
Gohir.A02G159200 Gossypium hirsutum HOM05D005929 ORTHO05D007869 5.1e-232 808.1 692 64.9
FAN23G0057 Fragaria x ananassa HOM05D005929 ORTHO05D007869 6.7e-232 807.7 714 62.2
Gohir.D03G021300 Gossypium hirsutum HOM05D005929 ORTHO05D007869 1.1e-231 807.0 696 64.5
Lsat_1_v5_gn_4_168021 Lactuca sativa HOM05D005929 ORTHO05D007869 2.0e-231 806.2 693 64.5
Gorai.003G022900 Gossypium raimondii HOM05D005929 ORTHO05D007869 3.3e-231 805.4 692 64.5
Gohir.D11G197600 Gossypium hirsutum HOM05D005929 ORTHO05D007869 4.4e-231 805.1 707 63.2
Sed0025648 Sechium edule HOM05D005929 ORTHO05D007869 7.4e-231 804.3 720 61.0
PSO170G4100 Papaver somniferum HOM05D005929 ORTHO05D007869 2.8e-230 802.4 717 60.9
Lj4A143G78 Lonicera japonica HOM05D005929 ORTHO05D007869 6.3e-230 801.2 712 64.6
HanXRQChr15g0490721 Helianthus annuus HOM05D005929 ORTHO05D007869 1.8e-229 799.7 708 63.0
CiPaw.01G019600 Carya illinoinensis HOM05D005929 ORTHO05D007869 5.3e-229 798.1 724 59.9
Sopen02g035300 Solanum pennellii HOM05D005929 ORTHO05D007869 9.1e-229 797.3 720 63.1
Solyc02g090650.4 Solanum lycopersicum HOM05D005929 ORTHO05D007869 5.9e-228 794.7 716 62.8
PGSC0003DMG400015776 Solanum tuberosum HOM05D005929 ORTHO05D007869 7.7e-228 794.3 720 63.1
PSO210G3061 Papaver somniferum HOM05D005929 ORTHO05D007869 2.9e-227 792.3 716 60.6
Hund13561 Selenicereus undatus HOM05D005929 ORTHO05D007869 1.1e-226 790.4 719 60.6
CiPaw.02G008900 Carya illinoinensis HOM05D005929 ORTHO05D007869 9.4e-226 787.3 729 59.3
Nitab4.5_0010605g0010 Nicotiana tabacum HOM05D005929 ORTHO05D007869 4.7e-225 785.0 726 61.2
Peaxi162Scf00964g00160 Petunia axillaris HOM05D005929 ORTHO05D007869 1.4e-224 783.5 721 60.2
arahy.Tifrunner.gnm1.ann1.UKY0C7 Arachis hypogaea HOM05D005929 ORTHO05D007869 1.1e-223 780.4 794 56.8
Rhsim08G0101600 Rhododendron simsii HOM05D005929 ORTHO05D007869 4.4e-223 778.5 939 50.4
Eucgr.H02007 Eucalyptus grandis HOM05D005929 ORTHO05D007869 4.8e-222 775.0 731 60.3
THA.LOC104821272 Tarenaya hassleriana HOM05D005929 ORTHO05D007869 1.1e-221 773.9 709 59.9
ECA232G2456 Erigeron canadensis HOM05D005929 ORTHO05D007869 2.0e-220 769.6 694 61.1
CAN.G836.71 Capsicum annuum HOM05D005929 ORTHO05D007869 3.5e-220 768.8 714 60.8
Nitab4.5_0000310g0090 Nicotiana tabacum HOM05D005929 ORTHO05D007869 1.2e-215 753.8 728 59.3
Thhalv10003742m.g Eutrema salsugineum HOM05D005929 ORTHO05D007869 3.3e-215 752.3 719 58.1
ATR0100G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 4.4e-215 751.9 718 57.0
HPP92_009382 Vanilla planifolia HOM05D005929 ORTHO05D007869 3.1e-213 745.7 715 58.5
Atru.chr3.351 Acer truncatum HOM05D005929 ORTHO05D007869 2.0e-212 743.0 639 61.8
Sp2g29870 Schrenkiella parvula HOM05D005929 ORTHO05D007869 3.8e-211 738.8 715 58.2
Aa31LG1G15360 Aethionema arabicum HOM05D005929 ORTHO05D007869 7.2e-210 734.6 765 54.5
C07p24970 Brassica napus HOM05D005929 ORTHO05D007869 3.4e-207 725.7 711 57.5
Aqoxy5G01270 Aquilegia oxysepala HOM05D005929 ORTHO05D007869 1.3e-206 723.8 707 58.0
AL8G44640 Arabidopsis lyrata HOM05D005929 ORTHO05D007869 1.3e-206 723.8 727 57.6
vmacro17944 Vaccinium macrocarpon HOM05D005929 ORTHO05D007869 2.2e-206 723.0 925 49.1
BraA07t29438Z Brassica rapa HOM05D005929 ORTHO05D007869 2.8e-206 722.6 708 57.3
Os10g0382300 Oryza sativa ssp. japonica HOM05D005929 ORTHO05D007869 2.8e-206 722.6 724 55.8
Carub.0008s2770 Capsella rubella HOM05D005929 ORTHO05D007869 1.1e-205 720.7 714 57.3
BcaC06g34750 Brassica carinata HOM05D005929 ORTHO05D007869 1.4e-205 720.3 711 57.1
A07p17110 Brassica napus HOM05D005929 ORTHO05D007869 7.0e-205 718.0 709 57.3
BolC7t43027H Brassica oleracea HOM05D005929 ORTHO05D007869 9.5e-202 707.6 735 55.2
BcaB02g09988 Brassica carinata HOM05D005929 ORTHO05D007869 2.1e-201 706.4 712 56.5
Zm00001eb223840 Zea mays HOM05D005929 ORTHO05D007869 2.0e-199 699.9 721 54.6
QL06p041881 Quercus lobata HOM05D005929 ORTHO05D007869 2.0e-188 663.3 597 60.5
AUR62003860 Chenopodium quinoa HOM05D005929 ORTHO05D007869 3.9e-187 659.1 612 59.0
Hma1.2p1_0200F.1_g086000 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 3.1e-184 649.4 567 63.7
AUR62001947 Chenopodium quinoa HOM05D005929 ORTHO05D007869 8.9e-184 647.9 606 58.6
Ca_22183_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 1.7e-174 617.1 570 60.4
Cpa.g.sc55.172 Carica papaya HOM05D005929 ORTHO05D007869 1.2e-172 610.9 553 61.8
Ah.03g144730 Amaranthus hybridus HOM05D005929 ORTHO05D007869 1.5e-167 594.0 585 57.9
Duzib264G1189 Durio zibethinus HOM05D005929 ORTHO05D007869 2.0e-167 593.6 706 52.1
CARHR280890 Cardamine hirsuta HOM05D005929 ORTHO05D007869 2.4e-160 570.1 585 56.2
Lalb_Chr09g0333751 Lupinus albus HOM05D005929 ORTHO05D007869 2.4e-152 543.5 535 58.3
AT5G66810 Arabidopsis thaliana HOM05D005929 ORTHO05D007869 6.9e-144 515.4 509 57.0
Pp3c4_14260 Physcomitrium patens HOM05D005929 ORTHO05D007869 3.4e-135 486.5 765 41.3
Mapoly0148s0013 Marchantia polymorpha HOM05D005929 ORTHO05D007869 1.6e-132 477.6 781 39.4
SMO116G0373 Selaginella moellendorffii HOM05D005929 ORTHO05D007869 2.7e-116 423.7 690 38.3
SalBow1G6022 Salvia bowleyana HOM05D005929 ORTHO05D007869 1.4e-115 421.4 293 76.8
CDE10G0678 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 7.2e-101 372.5 264 72.3
CDE10G0504 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 1.4e-88 331.6 440 47.0
Haze_15421 Corylus avellana HOM05D005929 ORTHO05D007869 5.9e-79 299.7 466 44.0
SEGI_10908 Sequoiadendron giganteum HOM05D005929 ORTHO05D000002 2.1e-76 291.2 430 42.6
Hma1.2p1_0200F.1_g086010 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 6.8e-59 233.0 301 49.5
RcHm_v2.0_Chr7g0235891 Rosa chinensis HOM05D005929 ORTHO05D007869 2.0e-58 231.5 186 64.0
PSO782G4943 Papaver somniferum HOM05D005929 ORTHO05D007869 8.3e-57 226.1 181 64.6
DCAR_001419 Daucus carota HOM05D005929 ORTHO05D007869 5.8e-50 203.4 278 45.7
Lalb_Chr09g0333761 Lupinus albus HOM05D005929 ORTHO05D007869 3.5e-47 194.1 153 66.0
Dinv29975 Davidia involucrata HOM05D005929 ORTHO05D007869 2.3e-46 191.4 368 39.9
PSO339G4212 Papaver somniferum HOM05D005929 ORTHO05D007869 6.2e-44 183.3 154 60.4
QL06p041873 Quercus lobata HOM05D005929 ORTHO05D007869 4.6e-39 167.2 126 69.8
Cpa.g.sc55.170 Carica papaya HOM05D005929 ORTHO05D007869 4.3e-37 160.6 135 63.7
ATR0833G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 5.6e-37 160.2 126 65.9
MD15G1282000 Malus domestica HOM05D005929 ORTHO05D007869 3.5e-31 141.0 108 73.1
MD15G1282100 Malus domestica HOM05D005929 ORTHO05D007869 1.5e-29 135.6 95 71.6
Lsat_1_v5_gn_2_14601 Lactuca sativa HOM05D005929 ORTHO05D029973 3.8e-25 120.9 147 51.7
MBI08_g05057_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D029973 7.4e-21 106.7 107 50.5
QL06p041946 Quercus lobata HOM05D005929 ORTHO05D007869 1.1e-11 76.3 150 34.7
unitig_736.g22376 Utricularia gibba HOM05D005929 ORTHO05D425945 1.0e-09 69.7 71 59.2
Cre01.g029050 Chlamydomonas reinhardtii HOM05D003178 ORTHO05D003636 3.2e-08 64.7 179 28.5
CARHR051520 Cardamine hirsuta HOM05D003178 ORTHO05D003636 2.1e-07 62.0 187 24.1
THA.LOC104809559 Tarenaya hassleriana HOM05D003178 ORTHO05D003636 6.7e-06 57.0 183 25.7
unitig_8.g3359 Utricularia gibba HOM05D003178 ORTHO05D003636 6.7e-06 57.0 218 23.4


User provided reference genes

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