Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H00433 Erythranthe guttata HOM05D005490 ORTHO05D006606 1.5e-239 832.8 538 100.0
Oeu031525.2 Olea europaea HOM05D005490 ORTHO05D006606 1.5e-186 656.8 493 80.9
Cc07_g05990 Coffea canephora HOM05D005490 ORTHO05D006606 2.2e-182 642.9 487 78.6
Dinv29986 Davidia involucrata HOM05D005490 ORTHO05D006606 2.4e-181 639.4 497 74.4
Lj7A69T47 Lonicera japonica HOM05D005490 ORTHO05D006606 1.2e-180 637.1 530 72.6
Manes.12G106800 Manihot esculenta HOM05D005490 ORTHO05D006606 5.3e-176 621.7 490 74.1
Oeu062437.1 Olea europaea HOM05D005490 ORTHO05D006606 4.5e-175 618.6 487 74.9
Nitab4.5_0002016g0110 Nicotiana tabacum HOM05D005490 ORTHO05D006606 1.1e-173 614.0 495 73.7
DCAR_025733 Daucus carota HOM05D005490 ORTHO05D006606 3.2e-173 612.5 512 69.5
Actinidia03792 Actinidia chinensis HOM05D005490 ORTHO05D006606 4.6e-172 608.6 496 73.6
CiPaw.01G018200 Carya illinoinensis HOM05D005490 ORTHO05D006606 4.6e-172 608.6 489 72.4
Lsat_1_v5_gn_2_84101 Lactuca sativa HOM05D005490 ORTHO05D006606 1.3e-171 607.1 507 71.6
HanXRQChr14g0442791 Helianthus annuus HOM05D005490 ORTHO05D006606 3.0e-171 605.9 481 75.3
Cfa004023 Carpinus fangiana HOM05D005490 ORTHO05D006606 3.9e-171 605.5 488 74.6
GSVIVG01022130001 Vitis vinifera HOM05D005490 ORTHO05D006606 1.6e-169 600.1 485 72.8
Nn5g30300 Nelumbo nucifera HOM05D005490 ORTHO05D006606 2.8e-169 599.4 496 72.4
TWI09G1398 Tripterygium wilfordii HOM05D005490 ORTHO05D006606 2.8e-169 599.4 489 74.0
QL06p041379 Quercus lobata HOM05D005490 ORTHO05D006606 4.8e-169 598.6 521 70.2
SGA_v2.0_scaffold15G07303 Striga asiatica HOM05D005490 ORTHO05D006606 1.4e-168 597.0 443 79.2
Gohir.D11G199100 Gossypium hirsutum HOM05D005490 ORTHO05D006606 9.0e-168 594.3 483 71.4
RcHm_v2.0_Chr2g0105671 Rosa chinensis HOM05D005490 ORTHO05D006606 2.0e-167 593.2 480 72.3
Potri.007G044100 Populus trichocarpa HOM05D005490 ORTHO05D006606 2.6e-167 592.8 492 71.7
Ciclev10025320m.g Citrus clementina HOM05D005490 ORTHO05D006606 1.7e-166 590.1 497 70.8
Thecc.01G056300 Theobroma cacao HOM05D005490 ORTHO05D006606 2.9e-166 589.3 488 71.1
Sc03g0001580 Simmondsia chinensis HOM05D005490 ORTHO05D006606 1.1e-165 587.4 485 73.6
Duzib187G0068 Durio zibethinus HOM05D005490 ORTHO05D006606 1.4e-165 587.0 508 69.1
Hma1.2p1_0461F.1_g157810 Hydrangea macrophylla HOM05D005490 ORTHO05D006606 7.1e-165 584.7 482 71.6
Lj2g0003149 Lotus japonicus HOM05D005490 ORTHO05D006606 1.0e-163 580.9 487 71.5
EL10Ac6g15745 Beta vulgaris HOM05D005490 ORTHO05D006606 1.8e-163 580.1 506 72.9
Sp7g34780 Schrenkiella parvula HOM05D005490 ORTHO05D006606 1.9e-162 576.6 493 71.6
Sed0007368 Sechium edule HOM05D005490 ORTHO05D006606 2.5e-162 576.2 488 72.1
TPR.G30705 Trifolium pratense HOM05D005490 ORTHO05D006606 4.3e-162 575.5 487 72.7
Psat2g166360 Pisum sativum HOM05D005490 ORTHO05D006606 9.7e-162 574.3 496 70.2
CSS0049924 Camellia sinensis var. sinensis HOM05D005490 ORTHO05D006606 1.3e-161 573.9 494 69.4
Glyma.01G186000 Glycine max HOM05D005490 ORTHO05D006606 2.8e-161 572.8 498 69.7
Medtr5g017430 Medicago truncatula HOM05D005490 ORTHO05D006606 4.8e-161 572.0 483 72.0
FAN19G0012 Fragaria x ananassa HOM05D005490 ORTHO05D006606 6.3e-161 571.6 496 70.2
FAN28G1226 Fragaria x ananassa HOM05D005490 ORTHO05D006606 6.3e-161 571.6 496 70.0
Lalb_Chr05g0213291 Lupinus albus HOM05D005490 ORTHO05D006606 6.3e-161 571.6 491 69.7
THA.LOC104804216 Tarenaya hassleriana HOM05D005490 ORTHO05D006606 6.3e-161 571.6 484 73.1
ECA238G0711 Erigeron canadensis HOM05D005490 ORTHO05D006606 8.2e-161 571.2 481 74.6
Carub.0007s0317 Capsella rubella HOM05D005490 ORTHO05D006606 1.1e-160 570.9 482 71.8
CAN.G660.7 Capsicum annuum HOM05D005490 ORTHO05D006606 6.9e-160 568.2 454 72.2
VMungo1215G3252 Vigna mungo HOM05D005490 ORTHO05D006606 6.9e-160 568.2 488 71.3
PGSC0003DMG400004042 Solanum tuberosum HOM05D005490 ORTHO05D006606 1.5e-159 567.0 452 71.0
arahy.Tifrunner.gnm1.ann1.JF37M9 Arachis hypogaea HOM05D005490 ORTHO05D006606 2.6e-159 566.2 488 72.1
Phvul.002G018900 Phaseolus vulgaris HOM05D005490 ORTHO05D006606 3.4e-159 565.8 498 70.3
Solyc02g090850.3 Solanum lycopersicum HOM05D005490 ORTHO05D006606 7.7e-159 564.7 452 70.6
Thhalv10025018m.g Eutrema salsugineum HOM05D005490 ORTHO05D006606 1.0e-158 564.3 486 72.0
AT4G36980 Arabidopsis thaliana HOM05D005490 ORTHO05D006606 2.2e-158 563.1 482 71.2
A01p01850 Brassica napus HOM05D005490 ORTHO05D006606 2.2e-158 563.1 483 70.0
BraA01t00174Z Brassica rapa HOM05D005490 ORTHO05D006606 2.2e-158 563.1 483 70.0
Prupe.7G133300 Prunus persica HOM05D005490 ORTHO05D006606 3.8e-158 562.4 485 67.4
Gorai.007G213300 Gossypium raimondii HOM05D005490 ORTHO05D006606 9.4e-157 557.8 483 68.1
CANSAT01G1717 Cannabis sativa HOM05D005490 ORTHO05D006606 2.7e-156 556.2 452 69.9
Aa31LG6G13990 Aethionema arabicum HOM05D005490 ORTHO05D006606 4.6e-156 555.4 497 67.2
Gohir.A11G192400 Gossypium hirsutum HOM05D005490 ORTHO05D006606 4.6e-156 555.4 483 67.7
Hund16323 Selenicereus undatus HOM05D005490 ORTHO05D006606 1.4e-155 553.9 480 72.9
C01p01990 Brassica napus HOM05D005490 ORTHO05D006606 2.0e-154 550.1 481 67.8
ClCG02G012530 Citrullus lanatus HOM05D005490 ORTHO05D006606 9.7e-154 547.7 494 68.6
AL7G13750 Arabidopsis lyrata HOM05D005490 ORTHO05D006606 1.7e-153 547.0 482 70.1
CsaV3_2G016660 Cucumis sativus L. HOM05D005490 ORTHO05D006606 2.8e-153 546.2 451 71.8
arahy.Tifrunner.gnm1.ann1.5GG3L5 Arachis hypogaea HOM05D005490 ORTHO05D006606 1.5e-151 540.4 523 66.9
Glyma.11G056000 Glycine max HOM05D005490 ORTHO05D006606 2.6e-151 539.7 493 68.2
BolC1t00193H Brassica oleracea HOM05D005490 ORTHO05D006606 3.4e-151 539.3 492 66.1
Gohir.A02G157300 Gossypium hirsutum HOM05D005490 ORTHO05D006606 1.0e-150 537.7 489 67.3
COL.COLO4_11415 Corchorus olitorius HOM05D005490 ORTHO05D006606 1.3e-150 537.3 448 71.7
Ca_24770_v3 Cicer arietinum L. HOM05D005490 ORTHO05D006606 1.9e-149 533.5 487 67.8
CARHR245520 Cardamine hirsuta HOM05D005490 ORTHO05D006606 2.5e-149 533.1 481 68.4
PSO210G6251 Papaver somniferum HOM05D005490 ORTHO05D006606 1.2e-148 530.8 449 71.0
PSO170G3823 Papaver somniferum HOM05D005490 ORTHO05D006606 6.1e-148 528.5 451 70.7
Sabra07G0038800 Salix brachista HOM05D005490 ORTHO05D006606 1.4e-147 527.3 502 63.9
Peaxi162Scf00450g00420 Petunia axillaris HOM05D005490 ORTHO05D006606 3.9e-147 525.8 494 63.0
Gorai.003G025100 Gossypium raimondii HOM05D005490 ORTHO05D006606 1.5e-146 523.9 484 68.0
CDE08G0045 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 2.2e-145 520.0 502 62.9
AUR62001928 Chenopodium quinoa HOM05D005490 ORTHO05D006606 4.8e-145 518.8 510 64.3
BcaNung02520 Brassica carinata HOM05D005490 ORTHO05D006606 8.5e-142 508.1 457 67.6
Gohir.D03G023600 Gossypium hirsutum HOM05D005490 ORTHO05D006606 9.4e-141 504.6 450 69.6
ATR1102G026 Amborella trichopoda HOM05D005490 ORTHO05D006606 1.1e-133 481.1 489 61.1
CDE06G1923 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 1.5e-133 480.7 466 62.4
Os03g0395900 Oryza sativa ssp. japonica HOM05D005490 ORTHO05D006606 2.7e-132 476.5 452 63.9
TAR381G1106 Trochodendron aralioides HOM05D005490 ORTHO05D006606 2.2e-129 466.8 377 74.5
Aqoxy5G01229 Aquilegia oxysepala HOM05D005490 ORTHO05D006606 6.3e-129 465.3 375 72.8
MD02G1172000 Malus domestica HOM05D005490 ORTHO05D006606 7.0e-128 461.8 376 69.7
Potri.005G138200 Populus trichocarpa HOM05D005490 ORTHO05D006606 7.0e-128 461.8 377 70.6
HPP92_004114 Vanilla planifolia HOM05D005490 ORTHO05D006606 5.9e-127 458.8 490 60.0
FAN26G0668 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.3e-121 441.0 387 68.7
Nitab4.5_0002440g0010 Nicotiana tabacum HOM05D005490 ORTHO05D006606 1.3e-121 441.0 497 55.3
unitig_899.g14662 Utricularia gibba HOM05D005490 ORTHO05D006606 3.0e-115 419.9 372 72.3
AUR62003882 Chenopodium quinoa HOM05D005490 ORTHO05D006606 1.7e-113 414.1 475 57.3
FAN23G2111 Fragaria x ananassa HOM05D005490 ORTHO05D006606 2.3e-110 403.7 390 65.1
Sabra05G0112300 Salix brachista HOM05D005490 ORTHO05D006606 5.0e-110 402.5 558 49.3
Ah.03g145080 Amaranthus hybridus HOM05D005490 ORTHO05D006606 2.8e-108 396.7 385 69.9
Hma1.2p1_0461F.1_g157800 Hydrangea macrophylla HOM05D005490 ORTHO05D006606 3.7e-105 386.3 351 71.8
Mapoly0012s0107 Marchantia polymorpha HOM05D005490 ORTHO05D006606 6.6e-102 375.6 470 53.8
Dinv39848 Davidia involucrata HOM05D005490 ORTHO05D006606 5.2e-99 365.9 281 72.6
Rhsim08G0100400 Rhododendron simsii HOM05D005490 ORTHO05D006606 5.2e-99 365.9 453 57.8
FvH4_1g16060 Fragaria vesca HOM05D005490 ORTHO05D006606 2.1e-95 354.0 341 67.7
Eucgr.I00926 Eucalyptus grandis HOM05D005490 ORTHO05D006606 9.5e-93 345.1 349 64.8
vmacro17955 Vaccinium macrocarpon HOM05D005490 ORTHO05D006606 3.1e-91 340.1 379 63.6
MD15G1284300 Malus domestica HOM05D005490 ORTHO05D006606 5.6e-85 319.3 337 60.5
Pp3c7_5520 Physcomitrium patens HOM05D005490 ORTHO05D006606 8.1e-84 315.5 529 46.3
MELO3C020875.2 Cucumis melo HOM05D005490 ORTHO05D006606 2.4e-83 313.9 310 68.4
Atru.chr3.327 Acer truncatum HOM05D005490 ORTHO05D006606 7.6e-82 308.9 309 64.4
Pp3c11_20900 Physcomitrium patens HOM05D005490 ORTHO05D006606 4.8e-76 289.7 529 43.7
Haze_15401 Corylus avellana HOM05D005490 ORTHO05D006606 2.7e-71 273.9 234 71.8
Haze_15403 Corylus avellana HOM05D005490 ORTHO05D006606 2.7e-71 273.9 234 72.2
HPP92_004074 Vanilla planifolia HOM05D005490 ORTHO05D006606 9.6e-69 265.4 344 56.1
Actinidia16483 Actinidia chinensis HOM05D005490 ORTHO05D006606 1.7e-65 254.6 310 59.4
Zm00001eb019290 Zea mays HOM05D005490 ORTHO05D006606 2.2e-65 254.2 276 59.4
Sopen02g035470 Solanum pennellii HOM05D005490 ORTHO05D006606 7.4e-61 239.2 244 60.7
SEGI_41077 Sequoiadendron giganteum HOM05D005490 ORTHO05D006606 1.1e-59 235.3 331 51.7
SEGI_00791 Sequoiadendron giganteum HOM05D005490 ORTHO05D006606 4.9e-57 226.5 153 74.5
CBR_g38045 Chara braunii HOM05D005490 ORTHO05D000004 7.1e-56 222.6 473 44.6
SMO356G0652 Selaginella moellendorffii HOM05D005490 ORTHO05D006606 6.0e-55 219.5 244 55.3
Atru.chr3.328 Acer truncatum HOM05D005490 ORTHO05D006606 1.3e-54 218.4 128 83.6
Cpa.g.sc55.148 Carica papaya HOM05D005490 ORTHO05D006606 1.5e-53 214.9 128 82.8
MD15G1284200 Malus domestica HOM05D005490 ORTHO05D006606 3.2e-48 197.2 128 78.9
Actinidia36493 Actinidia chinensis HOM05D005490 ORTHO05D006606 4.2e-48 196.8 353 44.8
AagrBONN_evm.TU.Sc2ySwM_344.4468 Anthoceros agrestis HOM05D005490 ORTHO05D006606 7.2e-40 169.5 479 35.5
Actinidia16484 Actinidia chinensis HOM05D005490 ORTHO05D006606 6.3e-36 156.4 84 90.5
CSS0031445 Camellia sinensis var. sinensis HOM05D005490 ORTHO05D006606 1.7e-33 148.3 118 74.6
Aqoxy5G01228 Aquilegia oxysepala HOM05D005490 ORTHO05D006606 1.4e-27 128.6 120 65.8
MD02G1172100 Malus domestica HOM05D005490 ORTHO05D006606 2.4e-27 127.9 110 70.0
VMungo1309G0325 Vigna mungo HOM05D005490 ORTHO05D006606 4.5e-26 123.6 163 47.9
SHI08459 Sapria himalayana HOM05D005490 ORTHO05D006606 1.7e-25 121.7 283 34.3
VMungo0720G1861 Vigna mungo HOM05D005490 ORTHO05D006606 3.7e-20 104.0 146 47.3
TAR381G1012 Trochodendron aralioides HOM05D005490 ORTHO05D006606 8.2e-20 102.8 79 81.0
FAN22G1581 Fragaria x ananassa HOM05D005490 ORTHO05D006606 2.4e-19 101.3 72 69.4
FAN17G2271 Fragaria x ananassa HOM05D005490 ORTHO05D006606 7.7e-18 96.3 66 72.7
Actinidia36494 Actinidia chinensis HOM05D005490 ORTHO05D006606 3.8e-17 94.0 78 69.2
FAN17G1267 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.6e-15 88.6 64 73.4
Atru.chr10.1611 Acer truncatum HOM05D005490 ORTHO05D006606 1.6e-10 72.0 49 69.4
VMungo1309G1585 Vigna mungo HOM05D005490 ORTHO05D006606 4.5e-10 70.5 86 48.8
VMungo0251G2361 Vigna mungo HOM05D007793 ORTHO05D010104 1.0e-09 69.3 85 45.9
Cre12.g498350 Chlamydomonas reinhardtii HOM05D005490 ORTHO05D006606 1.1e-08 65.9 193 29.0
ECA233G0248 Erigeron canadensis HOM05D000047 ORTHO05D006606 1.9e-08 65.1 120 45.0
CDE08G1038 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 7.2e-08 63.2 371 25.9
unitig_899.g14663 Utricularia gibba HOM05D005490 ORTHO05D006606 5.2e-06 57.0 91 47.3


User provided reference genes

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