Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H00418 Erythranthe guttata HOM05D006615 ORTHO05D007999 2.3e-112 409.1 231 100.0
MSTRG.2870 Avicennia marina HOM05D006615 ORTHO05D007999 1.6e-92 343.2 231 80.1
Oeu014828.1 Olea europaea HOM05D006615 ORTHO05D007999 4.4e-87 325.1 231 78.8
Cc07_g06140 Coffea canephora HOM05D006615 ORTHO05D007999 2.7e-84 315.8 229 78.6
Peaxi162Scf00549g00014 Petunia axillaris HOM05D006615 ORTHO05D007999 5.0e-83 311.6 214 83.2
Sopen02g037800 Solanum pennellii HOM05D006615 ORTHO05D007999 5.5e-82 308.1 222 80.2
vmacro05309 Vaccinium macrocarpon HOM05D006615 ORTHO05D007999 7.2e-82 307.8 219 76.3
Solyc02g093220.3 Solanum lycopersicum HOM05D006615 ORTHO05D007999 9.5e-82 307.4 222 79.7
PGSC0003DMG400004030 Solanum tuberosum HOM05D006615 ORTHO05D007999 9.5e-82 307.4 222 79.7
Haze_15377 Corylus avellana HOM05D006615 ORTHO05D007999 4.7e-81 305.1 223 76.7
Nn5g30349 Nelumbo nucifera HOM05D006615 ORTHO05D007999 4.7e-81 305.1 229 75.1
CAN.G370.40 Capsicum annuum HOM05D006615 ORTHO05D007999 6.1e-81 304.7 214 81.8
Nitab4.5_0002765g0020 Nicotiana tabacum HOM05D006615 ORTHO05D007999 2.3e-80 302.8 214 81.8
Rhsim10G0115300 Rhododendron simsii HOM05D006615 ORTHO05D007999 2.3e-80 302.8 219 76.7
Nitab4.5_0002694g0020 Nicotiana tabacum HOM05D006615 ORTHO05D007999 5.2e-80 301.6 214 80.8
CSS0020579 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 5.7e-79 298.1 226 70.4
Oeu049899.1 Olea europaea HOM05D006615 ORTHO05D007999 9.8e-79 297.4 216 78.2
HanXRQChr09g0263661 Helianthus annuus HOM05D006615 ORTHO05D007999 1.3e-78 297.0 218 78.0
QL06p040870 Quercus lobata HOM05D006615 ORTHO05D007999 1.3e-78 297.0 224 75.0
Actinidia12040 Actinidia chinensis HOM05D006615 ORTHO05D007999 4.9e-78 295.0 214 67.8
Oeu017456.1 Olea europaea HOM05D006615 ORTHO05D007999 1.4e-77 293.5 228 73.2
Prupe.7G131100 Prunus persica HOM05D006615 ORTHO05D007999 1.8e-77 293.1 213 78.4
COL.COLO4_11446 Corchorus olitorius HOM05D006615 ORTHO05D007999 7.0e-77 291.2 215 75.3
Atru.chr3.300 Acer truncatum HOM05D006615 ORTHO05D007999 9.2e-77 290.8 214 77.1
Ciclev10026421m.g Citrus clementina HOM05D006615 ORTHO05D007999 9.2e-77 290.8 213 74.6
MD02G1174700 Malus domestica HOM05D006615 ORTHO05D007999 1.2e-76 290.4 213 77.5
Gohir.A02G156700 Gossypium hirsutum HOM05D006615 ORTHO05D007999 1.6e-76 290.0 215 74.4
Ah.03g145470 Amaranthus hybridus HOM05D006615 ORTHO05D007999 2.0e-76 289.7 214 65.9
RcHm_v2.0_Chr2g0105951 Rosa chinensis HOM05D006615 ORTHO05D007999 2.0e-76 289.7 211 76.8
Sabra05G0110900 Salix brachista HOM05D006615 ORTHO05D007999 2.7e-76 289.3 216 74.1
FvH4_1g16240 Fragaria vesca HOM05D006615 ORTHO05D007999 4.5e-76 288.5 213 76.5
FAN19G1431 Fragaria x ananassa HOM05D006615 ORTHO05D007999 4.5e-76 288.5 213 76.5
FAN23G1998 Fragaria x ananassa HOM05D006615 ORTHO05D007999 4.5e-76 288.5 213 77.0
FAN26G2627 Fragaria x ananassa HOM05D006615 ORTHO05D007999 4.5e-76 288.5 211 77.3
FAN28G0965 Fragaria x ananassa HOM05D006615 ORTHO05D007999 4.5e-76 288.5 213 77.0
Gohir.A12G072600 Gossypium hirsutum HOM05D006615 ORTHO05D007999 5.9e-76 288.1 215 74.9
Lsat_1_v5_gn_4_164980 Lactuca sativa HOM05D006615 ORTHO05D007999 5.9e-76 288.1 217 76.0
TAR381G0796 Trochodendron aralioides HOM05D006615 ORTHO05D007999 7.8e-76 287.7 225 72.4
TAR625G0931 Trochodendron aralioides HOM05D006615 ORTHO05D007999 1.3e-75 287.0 224 71.0
CSS0005072 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 1.7e-75 286.6 226 62.4
Gorai.003G025500 Gossypium raimondii HOM05D006615 ORTHO05D007999 1.7e-75 286.6 215 73.5
Gohir.D12G070500 Gossypium hirsutum HOM05D006615 ORTHO05D007999 2.3e-75 286.2 215 69.8
Gorai.008G077500 Gossypium raimondii HOM05D006615 ORTHO05D007999 2.3e-75 286.2 215 69.8
Sabra07G0040600 Salix brachista HOM05D006615 ORTHO05D007999 2.3e-75 286.2 224 63.8
AUR62001910 Chenopodium quinoa HOM05D006615 ORTHO05D007999 2.9e-75 285.8 213 66.7
MD15G1285700 Malus domestica HOM05D006615 ORTHO05D007999 2.9e-75 285.8 213 75.1
Cpa.g.sc55.125 Carica papaya HOM05D006615 ORTHO05D007999 3.8e-75 285.4 215 65.6
Dinv26838 Davidia involucrata HOM05D000573 ORTHO05D000425 6.6e-75 284.6 166 80.7
GSVIVG01022099001 Vitis vinifera HOM05D006615 ORTHO05D007999 8.6e-75 284.3 228 61.8
Gohir.D03G024000 Gossypium hirsutum HOM05D006615 ORTHO05D007999 1.5e-74 283.5 215 73.0
Duzib147G0216 Durio zibethinus HOM05D006615 ORTHO05D007999 1.9e-74 283.1 215 73.5
Potri.005G140000 Populus trichocarpa HOM05D006615 ORTHO05D007999 1.9e-74 283.1 214 73.4
Sc03g0001700 Simmondsia chinensis HOM05D006615 ORTHO05D007999 1.9e-74 283.1 219 63.5
AUR62003898 Chenopodium quinoa HOM05D006615 ORTHO05D007999 2.5e-74 282.7 213 65.7
Thecc.01G059100 Theobroma cacao HOM05D006615 ORTHO05D007999 4.3e-74 282.0 210 75.2
Manes.12G104500 Manihot esculenta HOM05D006615 ORTHO05D007999 1.2e-73 280.4 215 74.9
Aqoxy5G01194 Aquilegia oxysepala HOM05D006615 ORTHO05D007999 1.6e-73 280.0 213 64.8
Hma1.2p1_0670F.1_g200450 Hydrangea macrophylla HOM05D006615 ORTHO05D007999 2.1e-73 279.6 229 61.1
THA.LOC104821250 Tarenaya hassleriana HOM05D006615 ORTHO05D007999 2.1e-73 279.6 214 75.2
Lj4C151G8 Lonicera japonica HOM05D006615 ORTHO05D007999 2.8e-73 279.3 213 73.7
ClCG02G012310 Citrullus lanatus HOM05D006615 ORTHO05D007999 8.0e-73 277.7 212 72.2
BcaB02g09933 Brassica carinata HOM05D006615 ORTHO05D007999 1.4e-72 276.9 215 73.0
Carub.0008s2737 Capsella rubella HOM05D006615 ORTHO05D007999 3.0e-72 275.8 215 73.0
AL8G44220 Arabidopsis lyrata HOM05D006615 ORTHO05D007999 4.0e-72 275.4 215 73.0
CDE02G1946 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 5.2e-72 275.0 229 67.7
CsaV3_2G016460 Cucumis sativus L. HOM05D006615 ORTHO05D007999 5.2e-72 275.0 216 69.9
Cfa004036 Carpinus fangiana HOM05D006615 ORTHO05D007999 6.8e-72 274.6 206 75.2
Lalb_Chr16g0378591 Lupinus albus HOM05D006615 ORTHO05D007999 6.8e-72 274.6 207 76.3
Thhalv10004869m.g Eutrema salsugineum HOM05D006615 ORTHO05D007999 1.5e-71 273.5 215 71.6
PSO170G0414 Papaver somniferum HOM05D006615 ORTHO05D007999 1.5e-71 273.5 213 63.4
BraA07t29407Z Brassica rapa HOM05D006615 ORTHO05D007999 2.0e-71 273.1 215 71.2
Hund16348 Selenicereus undatus HOM05D006615 ORTHO05D007999 2.6e-71 272.7 270 53.3
CARHR280510 Cardamine hirsuta HOM05D006615 ORTHO05D007999 3.4e-71 272.3 215 73.0
A07p16820 Brassica napus HOM05D006615 ORTHO05D007999 7.5e-71 271.2 215 70.7
CiPaw.01G016200 Carya illinoinensis HOM05D006615 ORTHO05D007999 7.5e-71 271.2 209 62.7
CDE04G2757 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 7.5e-71 271.2 229 66.4
AT5G67140 Arabidopsis thaliana HOM05D006615 ORTHO05D007999 9.8e-71 270.8 215 72.1
C07p24600 Brassica napus HOM05D006615 ORTHO05D007999 9.8e-71 270.8 214 71.0
BolC7t42980H Brassica oleracea HOM05D006615 ORTHO05D007999 9.8e-71 270.8 214 71.0
ATR0800G077 Amborella trichopoda HOM05D006615 ORTHO05D007999 1.7e-70 270.0 224 71.0
PSO210G0040 Papaver somniferum HOM05D006615 ORTHO05D007999 2.2e-70 269.6 215 62.3
MELO3C020856.2 Cucumis melo HOM05D006615 ORTHO05D007999 2.9e-70 269.2 225 67.6
Sp2g29550 Schrenkiella parvula HOM05D006615 ORTHO05D007999 2.9e-70 269.2 213 71.8
ECA232G2507 Erigeron canadensis HOM05D002761 ORTHO05D003351 3.7e-70 268.9 168 75.6
Aa31LG1G15650 Aethionema arabicum HOM05D006615 ORTHO05D007999 8.3e-70 267.7 215 70.7
Sed0009491 Sechium edule HOM05D006615 ORTHO05D007999 1.1e-69 267.3 216 67.6
arahy.Tifrunner.gnm1.ann1.XJ9ES7 Arachis hypogaea HOM05D006615 ORTHO05D007999 7.0e-69 264.6 212 74.5
DCAR_010880 Daucus carota HOM05D006615 ORTHO05D007999 9.2e-69 264.2 212 70.3
HPP92_026439 Vanilla planifolia HOM05D006615 ORTHO05D007999 1.2e-68 263.8 210 71.0
arahy.Tifrunner.gnm1.ann1.8K3JW9 Arachis hypogaea HOM05D006615 ORTHO05D007999 1.6e-68 263.5 214 73.8
Lj2g0018871 Lotus japonicus HOM05D006615 ORTHO05D007999 2.0e-68 263.1 205 73.7
SGA_v2.0_scaffold15G07326 Striga asiatica HOM05D006615 ORTHO05D007999 2.7e-68 262.7 231 71.9
TWI09G1033 Tripterygium wilfordii HOM05D006615 ORTHO05D007999 2.7e-68 262.7 220 58.6
Glyma.11G054300 Glycine max HOM05D006615 ORTHO05D007999 4.6e-68 261.9 209 72.7
Medtr5g016890 Medicago truncatula HOM05D006615 ORTHO05D007999 6.0e-68 261.5 207 72.0
Psat2g167840 Pisum sativum HOM05D006615 ORTHO05D007999 7.8e-68 261.2 207 64.7
TPR.G26907 Trifolium pratense HOM05D006615 ORTHO05D007999 7.8e-68 261.2 207 64.3
Glyma.01G187800 Glycine max HOM05D006615 ORTHO05D007999 3.9e-67 258.8 166 74.7
Phvul.002G017400 Phaseolus vulgaris HOM05D006615 ORTHO05D007999 1.2e-65 253.8 207 70.5
Atru.chr3.288 Acer truncatum HOM05D006615 ORTHO05D007999 4.7e-65 251.9 190 75.8
MELO3C020857.2 Cucumis melo HOM05D006615 ORTHO05D007999 1.1e-64 250.8 214 65.9
CsaV3_2G016470 Cucumis sativus L. HOM05D006615 ORTHO05D007999 1.1e-64 250.8 214 65.9
VMungo1215G1750 Vigna mungo HOM05D006615 ORTHO05D007999 1.4e-64 250.4 207 71.5
Lalb_Chr05g0213321 Lupinus albus HOM05D006615 ORTHO05D007999 2.9e-62 242.7 207 58.5
Eucgr.H01687 Eucalyptus grandis HOM05D006615 ORTHO05D007999 1.1e-61 240.7 209 56.0
SEGI_10636 Sequoiadendron giganteum HOM05D006615 ORTHO05D007999 2.5e-58 229.6 216 62.0
Zm00001eb375600 Zea mays HOM05D006615 ORTHO05D007999 3.3e-58 229.2 217 53.0
Os06g0166000 Oryza sativa ssp. japonica HOM05D006615 ORTHO05D007999 1.6e-57 226.9 209 55.0
Actinidia36482 Actinidia chinensis HOM05D006615 ORTHO05D007999 5.2e-56 221.9 205 59.0
unitig_748.g8604 Utricularia gibba HOM05D002191 ORTHO05D007999 1.4e-53 213.8 166 65.1
CANSAT01G0297 Cannabis sativa HOM05D006615 ORTHO05D007999 5.4e-53 211.8 213 54.5
Pp3c7_15700 Physcomitrium patens HOM05D006615 ORTHO05D007999 2.9e-46 189.5 158 56.3
Mapoly0005s0095 Marchantia polymorpha HOM05D006615 ORTHO05D007999 3.2e-45 186.0 170 52.9
AagrBONN_evm.TU.Sc2ySwM_344.5234 Anthoceros agrestis HOM05D006615 ORTHO05D007999 2.3e-43 179.9 158 55.1
Aqoxy6G01271 Aquilegia oxysepala HOM05D006615 ORTHO05D007999 5.1e-43 178.7 225 53.3
TWI73G1298 Tripterygium wilfordii HOM05D006615 ORTHO05D007999 1.9e-37 160.2 139 54.0
SMO164G0246 Selaginella moellendorffii HOM05D006615 ORTHO05D007999 1.3e-33 147.5 156 45.5
Potri.007G045601 Populus trichocarpa HOM05D006615 ORTHO05D007999 2.1e-33 146.7 97 75.3
MSTRG.3434 Avicennia marina HOM05D006615 ORTHO05D007999 5.8e-23 112.1 104 75.0
ClCG02G012330 Citrullus lanatus HOM05D006615 ORTHO05D007999 2.9e-14 83.2 83 53.0
Phvul.008G146300 Phaseolus vulgaris HOM05D006615 ORTHO05D007999 2.5e-10 70.1 45 68.9
FAN20G2926 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.7e-06 57.4 82 41.5
EL10Ac6g15726 Beta vulgaris HOM05D006615 ORTHO05D007999 2.2e-06 57.0 157 28.7
RcHm_v2.0_Chr3g0487451 Rosa chinensis HOM05D032618 ORTHO05D007999 3.8e-06 56.2 52 50.0
FvH4_2g32590 Fragaria vesca HOM05D002813 ORTHO05D003203 6.5e-06 55.5 114 37.7
FAN15G1401 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.5e-06 55.5 81 40.7
FAN24G0821 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.5e-06 55.5 114 37.7


User provided reference genes

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