Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H00415 Erythranthe guttata HOM05D004652 ORTHO05D005634 2.2e-196 688.7 344 100.0
MSTRG.23735 Avicennia marina HOM05D004652 ORTHO05D005634 7.5e-168 594.0 342 84.2
Dinv30009 Davidia involucrata HOM05D004652 ORTHO05D005634 2.5e-155 552.4 343 77.6
Nitab4.5_0001221g0030 Nicotiana tabacum HOM05D004652 ORTHO05D005634 2.9e-151 538.9 342 72.8
CSS0025726 Camellia sinensis var. sinensis HOM05D004652 ORTHO05D005634 1.9e-150 536.2 343 74.9
Cc07_g06170 Coffea canephora HOM05D004652 ORTHO05D005634 1.6e-149 533.1 344 72.7
Solyc02g093170.4 Solanum lycopersicum HOM05D004652 ORTHO05D005634 4.6e-149 531.6 343 71.7
PGSC0003DMG400004028 Solanum tuberosum HOM05D004652 ORTHO05D005634 4.6e-149 531.6 344 71.8
Sopen02g037740 Solanum pennellii HOM05D004652 ORTHO05D005634 1.0e-148 530.4 343 71.4
Actinidia36476 Actinidia chinensis HOM05D004652 ORTHO05D005634 5.1e-148 528.1 342 72.8
Nitab4.5_0002765g0060 Nicotiana tabacum HOM05D004652 ORTHO05D005634 1.1e-147 526.9 347 71.8
Nn5g30355 Nelumbo nucifera HOM05D004652 ORTHO05D005634 1.9e-147 526.2 345 72.5
Peaxi162Scf00549g00023 Petunia axillaris HOM05D004652 ORTHO05D005634 2.5e-147 525.8 342 70.8
QL06p040720 Quercus lobata HOM05D004652 ORTHO05D005634 6.2e-146 521.2 343 72.0
GSVIVG01022087001 Vitis vinifera HOM05D004652 ORTHO05D005634 1.5e-144 516.5 344 71.8
RcHm_v2.0_Chr2g0106191 Rosa chinensis HOM05D004652 ORTHO05D005634 4.4e-144 515.0 341 73.3
Actinidia12037 Actinidia chinensis HOM05D004652 ORTHO05D005634 4.9e-143 511.5 371 67.9
CSS0033708 Camellia sinensis var. sinensis HOM05D004652 ORTHO05D005634 1.1e-142 510.4 330 74.5
FAN19G0057 Fragaria x ananassa HOM05D004652 ORTHO05D005634 1.4e-142 510.0 343 71.4
unitig_736.g22389 Utricularia gibba HOM05D004652 ORTHO05D005634 1.4e-142 510.0 343 69.4
FvH4_1g16330 Fragaria vesca HOM05D004652 ORTHO05D005634 2.4e-142 509.2 343 71.4
Hma1.2p1_0670F.1_g200440 Hydrangea macrophylla HOM05D004652 ORTHO05D005634 2.7e-141 505.8 347 71.2
Lj7A73G20 Lonicera japonica HOM05D004652 ORTHO05D005634 2.7e-141 505.8 304 77.6
CiPaw.01G015800 Carya illinoinensis HOM05D004652 ORTHO05D005634 3.5e-141 505.4 343 69.7
CiPaw.01G015500 Carya illinoinensis HOM05D004652 ORTHO05D005634 4.6e-141 505.0 343 68.8
FAN23G0595 Fragaria x ananassa HOM05D004652 ORTHO05D005634 1.3e-140 503.4 343 70.6
CANSAT25G2702 Cannabis sativa HOM05D004652 ORTHO05D005634 2.3e-140 502.7 342 69.3
Oeu049898.1 Olea europaea HOM05D004652 ORTHO05D005634 8.7e-140 500.7 298 81.5
MELO3C020851.2 Cucumis melo HOM05D004652 ORTHO05D005634 1.3e-138 496.9 343 69.1
Lsat_1_v5_gn_4_165120 Lactuca sativa HOM05D004652 ORTHO05D005634 1.6e-138 496.5 345 69.6
HanXRQChr15g0490761 Helianthus annuus HOM05D004652 ORTHO05D005634 2.8e-138 495.7 346 69.1
CsaV3_2G016420 Cucumis sativus L. HOM05D004652 ORTHO05D005634 8.1e-138 494.2 343 69.4
MD02G1175800 Malus domestica HOM05D004652 ORTHO05D005634 1.4e-137 493.4 343 70.0
Haze_15373 Corylus avellana HOM05D004652 ORTHO05D005634 1.8e-137 493.0 373 64.6
FAN28G0632 Fragaria x ananassa HOM05D004652 ORTHO05D005634 3.1e-137 492.3 347 68.9
SGA_v2.0_scaffold143G35809 Striga asiatica HOM05D004652 ORTHO05D005634 9.0e-137 490.7 277 84.1
arahy.Tifrunner.gnm1.ann1.8Y90C0 Arachis hypogaea HOM05D004652 ORTHO05D005634 9.9e-136 487.3 352 67.3
Lj2g0023089 Lotus japonicus HOM05D004652 ORTHO05D005634 9.9e-136 487.3 347 68.9
Glyma.01G188100 Glycine max HOM05D004652 ORTHO05D005634 1.7e-135 486.5 347 67.7
Glyma.11G054000 Glycine max HOM05D004652 ORTHO05D005634 1.7e-135 486.5 346 68.2
Medtr7g104350 Medicago truncatula HOM05D004652 ORTHO05D005634 2.2e-135 486.1 343 68.2
Potri.007G045900 Populus trichocarpa HOM05D004652 ORTHO05D005634 3.8e-135 485.3 344 68.3
arahy.Tifrunner.gnm1.ann1.EFTP1R Arachis hypogaea HOM05D004652 ORTHO05D005634 4.9e-135 485.0 352 67.3
Ciclev10025986m.g Citrus clementina HOM05D004652 ORTHO05D005634 4.9e-135 485.0 347 67.4
DCAR_010876 Daucus carota HOM05D004652 ORTHO05D005634 2.4e-134 482.6 350 67.1
GSVIVG01031712001 Vitis vinifera HOM05D004652 ORTHO05D005634 9.3e-134 480.7 341 70.4
VMungo1215G2858 Vigna mungo HOM05D004652 ORTHO05D005634 1.6e-133 479.9 347 66.9
Lalb_Chr05g0213341 Lupinus albus HOM05D004652 ORTHO05D005634 2.1e-133 479.6 344 67.4
Duzib147G0331 Durio zibethinus HOM05D004652 ORTHO05D005634 7.9e-133 477.6 338 67.5
Psat3g034240 Pisum sativum HOM05D004652 ORTHO05D005634 7.9e-133 477.6 345 67.8
TPR.G19549 Trifolium pratense HOM05D004652 ORTHO05D005634 7.9e-133 477.6 343 67.1
Gorai.013G045700 Gossypium raimondii HOM05D004652 ORTHO05D005634 1.0e-132 477.2 343 70.3
Phvul.002G017100 Phaseolus vulgaris HOM05D004652 ORTHO05D005634 1.3e-132 476.9 347 66.9
Potri.009G099600 Populus trichocarpa HOM05D004652 ORTHO05D005634 1.8e-132 476.5 337 69.7
PGR102G1991 Punica granatum HOM05D004652 ORTHO05D005634 1.8e-132 476.5 344 66.0
Manes.13G121100 Manihot esculenta HOM05D004652 ORTHO05D005634 2.3e-132 476.1 345 67.5
Sabra09G0075900 Salix brachista HOM05D004652 ORTHO05D005634 3.0e-132 475.7 337 69.4
vmacro05311 Vaccinium macrocarpon HOM05D004652 ORTHO05D005634 5.1e-132 474.9 343 67.9
Gohir.A13G042200 Gossypium hirsutum HOM05D004652 ORTHO05D005634 6.7e-132 474.6 343 70.3
SGA_v2.0_scaffold34G13618 Striga asiatica HOM05D004652 ORTHO05D005634 6.7e-132 474.6 281 82.2
Thecc.02G103600 Theobroma cacao HOM05D004652 ORTHO05D005634 8.7e-132 474.2 343 70.3
TWI31G1310 Tripterygium wilfordii HOM05D004652 ORTHO05D005634 8.7e-132 474.2 304 74.3
ECA232G0198 Erigeron canadensis HOM05D004652 ORTHO05D005634 2.5e-131 472.6 327 69.7
Atru.chr5.2643 Acer truncatum HOM05D004652 ORTHO05D005634 1.6e-130 469.9 318 71.1
Atru.chr5.2649 Acer truncatum HOM05D004652 ORTHO05D005634 1.6e-130 469.9 318 71.1
Ciclev10030127m.g Citrus clementina HOM05D004652 ORTHO05D005634 1.6e-130 469.9 337 67.4
Cpa.g.sc55.119 Carica papaya HOM05D004652 ORTHO05D005634 2.8e-130 469.2 326 68.4
Sed0013827 Sechium edule HOM05D004652 ORTHO05D005634 4.8e-130 468.4 341 65.1
PSO675G7477 Papaver somniferum HOM05D004652 ORTHO05D005634 8.1e-130 467.6 360 63.3
Duzib132G1249 Durio zibethinus HOM05D004652 ORTHO05D005634 4.0e-129 465.3 341 68.6
TWI09G0879 Tripterygium wilfordii HOM05D004652 ORTHO05D005634 4.0e-129 465.3 343 66.8
Gorai.007G215700 Gossypium raimondii HOM05D004652 ORTHO05D005634 2.0e-128 463.0 343 65.9
AUR62013234 Chenopodium quinoa HOM05D004652 ORTHO05D005634 2.6e-128 462.6 313 71.2
Aqoxy6G01262 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 5.8e-128 461.5 342 66.1
Sc07g0000730 Simmondsia chinensis HOM05D004652 ORTHO05D005634 1.3e-127 460.3 344 64.8
Sabra07G0041100 Salix brachista HOM05D004652 ORTHO05D005634 1.4e-126 456.8 377 60.7
Thecc.01G060000 Theobroma cacao HOM05D004652 ORTHO05D005634 9.3e-126 454.1 303 70.0
Eucgr.I01131 Eucalyptus grandis HOM05D004652 ORTHO05D005634 1.2e-125 453.8 340 65.6
Gohir.A11G195100 Gossypium hirsutum HOM05D004652 ORTHO05D005634 1.5e-123 446.8 305 69.5
Rhsim10G0114700 Rhododendron simsii HOM05D004652 ORTHO05D005634 9.6e-123 444.1 309 69.3
THA.LOC104807263 Tarenaya hassleriana HOM05D004652 ORTHO05D005634 1.3e-122 443.7 324 65.1
Hund13540 Selenicereus undatus HOM05D004652 ORTHO05D005634 1.5e-120 436.8 336 62.2
Thhalv10025679m.g Eutrema salsugineum HOM05D004652 ORTHO05D005634 5.8e-120 434.9 325 65.8
AL7G17310 Arabidopsis lyrata HOM05D004652 ORTHO05D005634 1.7e-119 433.3 318 66.7
Os03g0109700 Oryza sativa ssp. japonica HOM05D004652 ORTHO05D005634 2.2e-119 433.0 341 63.0
CARHR242200 Cardamine hirsuta HOM05D004652 ORTHO05D005634 2.9e-119 432.6 337 63.5
AT4G34090 Arabidopsis thaliana HOM05D004652 ORTHO05D005634 6.5e-119 431.4 337 63.5
EL10Ac9g22324 Beta vulgaris HOM05D004652 ORTHO05D005634 8.4e-119 431.0 348 61.8
Sp7g31800 Schrenkiella parvula HOM05D004652 ORTHO05D005634 8.4e-119 431.0 325 65.8
CDE02G2369 Ceratophyllum demersum HOM05D004652 ORTHO05D005634 1.4e-118 430.3 308 67.2
BcaNung03359 Brassica carinata HOM05D004652 ORTHO05D005634 2.5e-118 429.5 325 65.2
ATR0724G029 Amborella trichopoda HOM05D004652 ORTHO05D005634 5.5e-118 428.3 333 62.8
Carub.0007s0633 Capsella rubella HOM05D004652 ORTHO05D005634 5.5e-118 428.3 318 65.7
Ah.01g017900 Amaranthus hybridus HOM05D004652 ORTHO05D005634 1.2e-117 427.2 284 71.1
Prupe.6G231900 Prunus persica HOM05D004652 ORTHO05D005634 1.3e-116 423.7 292 70.5
Aa31LG2G16510 Aethionema arabicum HOM05D002471 ORTHO05D003712 1.8e-116 423.3 306 66.0
Atru.chr3.293 Acer truncatum HOM05D004652 ORTHO05D005634 8.7e-116 421.0 349 59.3
HPP92_024094 Vanilla planifolia HOM05D004652 ORTHO05D005634 2.2e-114 416.4 351 59.3
AUR62010252 Chenopodium quinoa HOM05D004652 ORTHO05D005634 1.4e-113 413.7 282 70.6
Eucgr.H01690 Eucalyptus grandis HOM05D004652 ORTHO05D005634 5.3e-113 411.8 309 61.5
Gohir.D11G201200 Gossypium hirsutum HOM05D004652 ORTHO05D005634 5.3e-113 411.8 283 68.6
Zm00001eb404220 Zea mays HOM05D004652 ORTHO05D005634 5.3e-113 411.8 324 62.7
AUR62001905 Chenopodium quinoa HOM05D004652 ORTHO05D005634 9.0e-113 411.0 316 61.7
PSO541G5706 Papaver somniferum HOM05D004652 ORTHO05D005634 2.6e-112 409.5 360 58.3
AT2G23370 Arabidopsis thaliana HOM05D004652 ORTHO05D005634 1.3e-111 407.1 312 61.9
THA.LOC104807591 Tarenaya hassleriana HOM05D004652 ORTHO05D005634 2.5e-110 402.9 339 58.1
AL4G13280 Arabidopsis lyrata HOM05D004652 ORTHO05D005634 6.7e-108 394.8 315 60.6
Carub.0004s0257 Capsella rubella HOM05D004652 ORTHO05D005634 6.7e-108 394.8 325 59.4
CARHR293000 Cardamine hirsuta HOM05D004652 ORTHO05D005634 3.3e-107 392.5 312 60.3
Hund00119 Selenicereus undatus HOM05D004652 ORTHO05D005634 2.2e-106 389.8 338 59.8
BolC8t51563H Brassica oleracea HOM05D004652 ORTHO05D005634 2.8e-106 389.4 310 60.0
A09p56940 Brassica napus HOM05D004652 ORTHO05D005634 2.4e-105 386.3 310 59.7
BcaC07g40988 Brassica carinata HOM05D004652 ORTHO05D005634 4.1e-105 385.6 310 59.7
C08p39900 Brassica napus HOM05D004652 ORTHO05D005634 4.1e-105 385.6 310 59.7
Sp4g02380 Schrenkiella parvula HOM05D004652 ORTHO05D005634 2.0e-104 383.3 314 58.6
BraA09t41086Z Brassica rapa HOM05D004652 ORTHO05D005634 5.9e-104 381.7 310 59.0
BolC7t46455H Brassica oleracea HOM05D004652 ORTHO05D005634 1.9e-102 376.7 328 60.1
ClCG02G012270 Citrullus lanatus HOM05D004652 ORTHO05D005634 6.7e-100 368.2 261 67.8
Cpa.g.sc200.27 Carica papaya HOM05D004652 ORTHO05D005634 1.5e-99 367.1 359 55.2
AUR62003906 Chenopodium quinoa HOM05D004652 ORTHO05D005634 2.0e-99 366.7 284 59.9
BraA03t15329Z Brassica rapa HOM05D004652 ORTHO05D005634 3.3e-99 365.9 306 61.1
SMO367G0761 Selaginella moellendorffii HOM05D004652 ORTHO05D005634 9.7e-99 364.4 303 55.1
C07p60150 Brassica napus HOM05D004652 ORTHO05D005634 4.8e-98 362.1 355 55.5
Mapoly0032s0004 Marchantia polymorpha HOM05D004652 ORTHO05D005634 4.8e-98 362.1 309 55.3
Aa31LG7G13600 Aethionema arabicum HOM05D004652 ORTHO05D005634 1.8e-97 360.1 352 53.1
A03p62590 Brassica napus HOM05D004652 ORTHO05D005634 2.4e-97 359.8 355 54.9
Ca_08994_v3 Cicer arietinum L. HOM05D004652 ORTHO05D005634 7.2e-94 348.2 345 54.8
COL.COLO4_32629 Corchorus olitorius HOM05D004652 ORTHO05D005634 2.7e-93 346.3 343 56.0
Pp3c4_13980 Physcomitrium patens HOM05D004652 ORTHO05D005634 2.7e-93 346.3 302 52.6
COL.COLO4_24563 Corchorus olitorius HOM05D004652 ORTHO05D005634 4.0e-92 342.4 249 65.5
Thhalv10000243m.g Eutrema salsugineum HOM05D004652 ORTHO05D005634 4.5e-88 328.9 325 52.0
Pp3c13_18360 Physcomitrium patens HOM05D004652 ORTHO05D005634 1.2e-85 320.9 302 50.7
AagrBONN_evm.TU.Sc2ySwM_362.2895 Anthoceros agrestis HOM05D004652 ORTHO05D005634 1.5e-83 313.9 315 50.2
EL10Ac6g15724 Beta vulgaris HOM05D004652 ORTHO05D005634 3.4e-83 312.8 237 60.8
Oeu004436.1 Olea europaea HOM05D004652 ORTHO05D005634 9.8e-83 311.2 318 56.0
Ah.02g125990 Amaranthus hybridus HOM05D004652 ORTHO05D005634 4.1e-81 305.8 283 54.4
CBR_g34458 Chara braunii HOM05D004652 ORTHO05D005634 2.7e-80 303.1 335 46.3
Gohir.D13G040700 Gossypium hirsutum HOM05D004652 ORTHO05D005634 7.7e-80 301.6 234 67.5
Eucgr.I01132 Eucalyptus grandis HOM05D004652 ORTHO05D005634 3.0e-76 289.7 227 63.9
FAN26G0096 Fragaria x ananassa HOM05D004652 ORTHO05D005634 5.6e-70 268.9 162 75.9
TAR381G1258 Trochodendron aralioides HOM05D004652 ORTHO05D005634 8.3e-66 255.0 213 62.4
SEGI_25477 Sequoiadendron giganteum HOM05D004652 ORTHO05D005634 2.2e-58 230.3 176 60.2
SEGI_26044 Sequoiadendron giganteum HOM05D004652 ORTHO05D005634 2.2e-58 230.3 176 60.2
Aqoxy2G01254 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 1.7e-55 220.7 138 71.7
TAR381G1342 Trochodendron aralioides HOM05D004652 ORTHO05D005634 1.4e-44 184.5 111 73.9
Aqoxy4G02413 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 1.0e-39 168.3 135 60.0
Cre13.g563150 Chlamydomonas reinhardtii HOM05D004652 ORTHO05D005634 3.9e-39 166.4 333 30.0
ECA248G0229 Erigeron canadensis HOM05D004652 ORTHO05D005634 7.3e-38 162.2 196 46.9
PRCOL_00001748 Prasinoderma coloniale HOM05D004652 ORTHO05D005634 7.3e-38 162.2 312 34.0
TAR381G1519 Trochodendron aralioides HOM05D004652 ORTHO05D005634 2.1e-29 134.0 163 44.8
Potri.001G304401 Populus trichocarpa HOM05D004652 ORTHO05D005634 6.2e-29 132.5 126 54.0
MCO15G669 Micromonas commoda HOM05D004652 ORTHO05D005634 4.0e-28 129.8 306 28.8
Sabra07G0040900 Salix brachista HOM05D015619 ORTHO05D009044 1.3e-23 114.8 80 68.8
MCO09G010 Micromonas commoda HOM05D004652 ORTHO05D005634 1.3e-21 108.2 272 30.5
Lalb_Chr09g0323281 Lupinus albus HOM05D004652 ORTHO05D005634 1.2e-19 101.7 176 35.8
Cc00_g07740 Coffea canephora HOM05D004652 ORTHO05D005634 2.0e-19 100.9 279 28.3
CDE01G0594 Ceratophyllum demersum HOM05D000934 ORTHO05D000746 1.6e-13 81.3 105 40.0
FAN23G0103 Fragaria x ananassa HOM05D004652 ORTHO05D198901 7.1e-09 65.9 117 39.3


User provided reference genes

Program Settings