Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H00394 Erythranthe guttata HOM05D005694 ORTHO05D007402 1.1e-237 826.2 419 100.0
MSTRG.2849 Avicennia marina HOM05D005694 ORTHO05D007402 3.1e-184 648.7 402 81.8
SGA_v2.0_scaffold143G35788 Striga asiatica HOM05D005694 ORTHO05D007402 4.3e-173 611.7 380 81.6
Oeu037163.1 Olea europaea HOM05D005694 ORTHO05D007402 2.2e-169 599.4 379 78.9
Sopen03g008170 Solanum pennellii HOM05D005694 ORTHO05D007402 1.9e-165 586.3 401 72.3
Solyc03g044190.3 Solanum lycopersicum HOM05D005694 ORTHO05D007402 3.3e-165 585.5 401 72.6
Prupe.6G229100 Prunus persica HOM05D005694 ORTHO05D007402 5.8e-162 574.7 389 74.6
PGSC0003DMG400014873 Solanum tuberosum HOM05D005694 ORTHO05D007402 2.9e-161 572.4 381 73.8
Nitab4.5_0002657g0010 Nicotiana tabacum HOM05D005694 ORTHO05D007402 9.2e-160 567.4 393 71.8
COL.COLO4_11482 Corchorus olitorius HOM05D005694 ORTHO05D007402 2.7e-159 565.8 393 73.3
RcHm_v2.0_Chr2g0106661 Rosa chinensis HOM05D005694 ORTHO05D007402 2.7e-159 565.8 404 70.8
Gorai.007G218000 Gossypium raimondii HOM05D005694 ORTHO05D007402 4.6e-159 565.1 393 73.0
FvH4_1g16760 Fragaria vesca HOM05D005694 ORTHO05D007402 1.1e-157 560.5 400 71.0
Thecc.01G063300 Theobroma cacao HOM05D005694 ORTHO05D007402 4.3e-157 558.5 393 73.0
Duzib264G0643 Durio zibethinus HOM05D005694 ORTHO05D007402 1.6e-156 556.6 382 73.8
FAN23G2399 Fragaria x ananassa HOM05D005694 ORTHO05D007402 4.7e-156 555.1 403 69.7
Ciclev10025664m.g Citrus clementina HOM05D005694 ORTHO05D007402 3.1e-155 552.4 405 69.6
Nitab4.5_0003962g0030 Nicotiana tabacum HOM05D005694 ORTHO05D007402 4.0e-155 552.0 393 70.5
FAN19G0282 Fragaria x ananassa HOM05D005694 ORTHO05D007402 5.2e-155 551.6 400 70.2
Gohir.D11G203300 Gossypium hirsutum HOM05D005694 ORTHO05D007402 5.2e-155 551.6 382 73.3
FAN26G1197 Fragaria x ananassa HOM05D005694 ORTHO05D007402 1.2e-154 550.4 400 70.0
Manes.12G108400 Manihot esculenta HOM05D005694 ORTHO05D007402 5.8e-154 548.1 390 71.5
CANSAT25G2140 Cannabis sativa HOM05D005694 ORTHO05D007402 1.7e-153 546.6 419 67.1
Hund16366 Selenicereus undatus HOM05D005694 ORTHO05D007402 2.9e-153 545.8 414 66.4
QL06p040237 Quercus lobata HOM05D005694 ORTHO05D007402 3.7e-153 545.4 389 70.7
Sabra05G0051000 Salix brachista HOM05D005694 ORTHO05D007402 3.7e-153 545.4 390 69.2
Haze_15351 Corylus avellana HOM05D005694 ORTHO05D007402 6.4e-153 544.7 392 70.4
CANSAT25G0291 Cannabis sativa HOM05D005694 ORTHO05D007402 1.1e-152 543.9 415 68.7
Peaxi162Scf00365g00618 Petunia axillaris HOM05D005694 ORTHO05D007402 1.4e-152 543.5 378 70.6
Potri.005G060500 Populus trichocarpa HOM05D005694 ORTHO05D007402 3.2e-152 542.3 374 71.4
Lsat_1_v5_gn_3_88661 Lactuca sativa HOM05D005694 ORTHO05D007402 7.1e-152 541.2 399 69.9
Cfa004061 Carpinus fangiana HOM05D005694 ORTHO05D007402 9.2e-152 540.8 392 69.6
arahy.Tifrunner.gnm1.ann1.ZT89Y7 Arachis hypogaea HOM05D005694 ORTHO05D007402 3.5e-151 538.9 385 69.6
Cpa.g.sc6.99 Carica papaya HOM05D005694 ORTHO05D007402 1.0e-150 537.3 389 69.7
MELO3C007585.2 Cucumis melo HOM05D005694 ORTHO05D007402 1.3e-150 537.0 382 70.9
unitig_46.g18707 Utricularia gibba HOM05D005694 ORTHO05D007402 3.9e-150 535.4 380 71.1
AL8G44040 Arabidopsis lyrata HOM05D005694 ORTHO05D007402 6.6e-150 534.6 384 69.5
A05p41050 Brassica napus HOM05D005694 ORTHO05D007402 1.5e-149 533.5 383 68.7
BraA05t22832Z Brassica rapa HOM05D005694 ORTHO05D007402 1.5e-149 533.5 397 67.5
EL10Ac6g15690 Beta vulgaris HOM05D005694 ORTHO05D007402 1.9e-149 533.1 422 64.7
Atru.chr3.251 Acer truncatum HOM05D005694 ORTHO05D007402 3.3e-149 532.3 379 69.4
PGR004G1079 Punica granatum HOM05D005694 ORTHO05D007402 4.3e-149 531.9 398 68.6
CsaV3_6G043550 Cucumis sativus L. HOM05D005694 ORTHO05D007402 7.3e-149 531.2 381 69.6
Sp2g29370 Schrenkiella parvula HOM05D005694 ORTHO05D007402 2.1e-148 529.6 372 70.7
MD02G1178800 Malus domestica HOM05D005694 ORTHO05D007402 3.6e-148 528.9 363 73.3
Sed0004561 Sechium edule HOM05D005694 ORTHO05D007402 4.7e-148 528.5 407 66.6
BcaC05g29844 Brassica carinata HOM05D005694 ORTHO05D007402 1.1e-147 527.3 372 69.9
BolC5t34672H Brassica oleracea HOM05D005694 ORTHO05D007402 1.1e-147 527.3 372 69.9
ECA246G1807 Erigeron canadensis HOM05D005694 ORTHO05D007402 1.8e-147 526.6 383 69.2
Glyma.17G167200 Glycine max HOM05D005694 ORTHO05D007402 1.8e-147 526.6 384 69.3
THA.LOC104819246 Tarenaya hassleriana HOM05D005694 ORTHO05D007402 1.8e-147 526.6 382 68.8
Thhalv10004317m.g Eutrema salsugineum HOM05D005694 ORTHO05D007402 2.3e-147 526.2 372 69.9
ClCG01G017080 Citrullus lanatus HOM05D005694 ORTHO05D007402 4.0e-147 525.4 382 69.4
HanXRQChr12g0377261 Helianthus annuus HOM05D005694 ORTHO05D007402 6.8e-147 524.6 412 66.3
Lj4g0009127 Lotus japonicus HOM05D005694 ORTHO05D007402 1.5e-146 523.5 385 67.3
CiPaw.01G012900 Carya illinoinensis HOM05D005694 ORTHO05D007402 2.6e-146 522.7 373 70.2
BcaB06g28844 Brassica carinata HOM05D005694 ORTHO05D007402 4.4e-146 521.9 372 68.8
Duzib147G1433 Durio zibethinus HOM05D005694 ORTHO05D007402 5.8e-146 521.5 386 70.5
Carub.0008s2721 Capsella rubella HOM05D005694 ORTHO05D007402 7.6e-146 521.2 392 67.9
Gohir.A11G220300 Gossypium hirsutum HOM05D005694 ORTHO05D007402 1.3e-145 520.4 401 67.8
Aqoxy6G02871 Aquilegia oxysepala HOM05D005694 ORTHO05D007402 1.7e-145 520.0 379 68.9
CARHR280330 Cardamine hirsuta HOM05D005694 ORTHO05D007402 1.7e-145 520.0 406 66.0
Ca_22124_v3 Cicer arietinum L. HOM05D005694 ORTHO05D007402 2.2e-145 519.6 377 69.2
Actinidia12019 Actinidia chinensis HOM05D005694 ORTHO05D007402 2.9e-145 519.2 361 73.4
Rhsim10G0112600 Rhododendron simsii HOM05D005694 ORTHO05D007402 3.8e-145 518.8 385 67.8
AUR62003938 Chenopodium quinoa HOM05D005694 ORTHO05D007402 4.9e-145 518.5 398 65.1
VMungo0251G0564 Vigna mungo HOM05D005694 ORTHO05D007402 1.1e-144 517.3 375 67.5
Lalb_Chr16g0388811 Lupinus albus HOM05D005694 ORTHO05D007402 1.4e-144 516.9 373 68.6
Phvul.003G240300 Phaseolus vulgaris HOM05D005694 ORTHO05D007402 1.9e-144 516.5 386 66.8
TAR625G0317 Trochodendron aralioides HOM05D005694 ORTHO05D007402 1.9e-144 516.5 383 69.5
AT5G67290 Arabidopsis thaliana HOM05D005694 ORTHO05D007402 1.6e-143 513.5 404 65.8
CSS0006569 Camellia sinensis var. sinensis HOM05D005694 ORTHO05D007402 1.6e-143 513.5 366 71.9
arahy.Tifrunner.gnm1.ann1.MA1EVV Arachis hypogaea HOM05D005694 ORTHO05D007402 2.7e-143 512.7 452 59.5
C05p60220 Brassica napus HOM05D005694 ORTHO05D007402 3.5e-143 512.3 397 65.2
AUR62038254 Chenopodium quinoa HOM05D005694 ORTHO05D007402 3.5e-143 512.3 397 63.7
Medtr4g094962 Medicago truncatula HOM05D005694 ORTHO05D007402 7.8e-143 511.1 382 68.3
PSO541G0377 Papaver somniferum HOM05D005694 ORTHO05D007402 3.0e-142 509.2 385 67.5
Cc11_g04760 Coffea canephora HOM05D005694 ORTHO05D007402 1.1e-141 507.3 374 69.5
Nn1g04704 Nelumbo nucifera HOM05D005694 ORTHO05D007402 1.1e-141 507.3 400 66.0
Psat4g084360 Pisum sativum HOM05D005694 ORTHO05D007402 1.9e-141 506.5 407 63.9
DCAR_025759 Daucus carota HOM05D005694 ORTHO05D007402 2.1e-140 503.1 350 73.4
TAR381G0027 Trochodendron aralioides HOM05D005694 ORTHO05D007402 2.8e-140 502.7 369 70.2
TAR381G0285 Trochodendron aralioides HOM05D005694 ORTHO05D007402 2.8e-140 502.7 369 70.2
Sc16g0005230 Simmondsia chinensis HOM05D005694 ORTHO05D007402 3.6e-140 502.3 374 66.3
TAR625G0863 Trochodendron aralioides HOM05D005694 ORTHO05D007402 6.2e-140 501.5 403 65.5
Aa31LG1G15820 Aethionema arabicum HOM05D005694 ORTHO05D007402 8.1e-140 501.1 383 64.8
TPR.G23863 Trifolium pratense HOM05D005694 ORTHO05D007402 1.1e-139 500.7 387 66.1
Dinv26866 Davidia involucrata HOM05D005694 ORTHO05D007402 2.2e-137 493.0 376 69.4
PSO675G2151 Papaver somniferum HOM05D005694 ORTHO05D007402 4.9e-137 491.9 400 64.0
Eucgr.I00787 Eucalyptus grandis HOM05D005694 ORTHO05D007402 9.3e-136 487.6 372 67.2
Eucgr.I00761 Eucalyptus grandis HOM05D005694 ORTHO05D007402 1.2e-135 487.3 372 67.2
Glyma.05G097800 Glycine max HOM05D005694 ORTHO05D007402 7.8e-135 484.6 403 62.5
Lj4g0018653 Lotus japonicus HOM05D005694 ORTHO05D007402 9.6e-133 477.6 387 63.6
Sc16g0005220 Simmondsia chinensis HOM05D005694 ORTHO05D007402 4.6e-127 458.8 374 61.8
CDE06G0326 Ceratophyllum demersum HOM05D005694 ORTHO05D007402 7.4e-125 451.4 366 63.4
vmacro05254 Vaccinium macrocarpon HOM05D005694 ORTHO05D007402 1.4e-120 437.2 407 59.0
ATR1098G030 Amborella trichopoda HOM05D005694 ORTHO05D007402 9.3e-120 434.5 372 61.6
Os07g0155100 Oryza sativa ssp. japonica HOM05D005694 ORTHO05D007402 4.3e-117 425.6 380 60.0
HPP92_017733 Vanilla planifolia HOM05D005694 ORTHO05D007402 1.3e-116 424.1 369 59.9
Dinv30033 Davidia involucrata HOM05D005694 ORTHO05D007402 4.8e-116 422.2 363 62.8
Zm00001eb300250 Zea mays HOM05D005694 ORTHO05D007402 4.9e-113 412.1 382 58.6
HanXRQChr02g0044351 Helianthus annuus HOM05D005694 ORTHO05D007402 4.6e-111 405.6 374 57.0
SEGI_26559 Sequoiadendron giganteum HOM05D005694 ORTHO05D007402 9.7e-109 397.9 373 54.4
Mapoly0178s0017 Marchantia polymorpha HOM05D005694 ORTHO05D007402 1.6e-108 397.1 384 54.2
Pp3c14_12180 Physcomitrium patens HOM05D005694 ORTHO05D007402 6.3e-108 395.2 374 56.7
AagrBONN_evm.TU.Sc2ySwM_117.3787 Anthoceros agrestis HOM05D005694 ORTHO05D007402 2.4e-107 393.3 385 54.3
ECA238G4251 Erigeron canadensis HOM05D005694 ORTHO05D007402 5.3e-107 392.1 374 57.2
SMO351G0208 Selaginella moellendorffii HOM05D005694 ORTHO05D007402 1.0e-102 377.9 386 50.0
SMO367G0384 Selaginella moellendorffii HOM05D005694 ORTHO05D007402 6.9e-99 365.2 380 49.7
Lj7C77T1 Lonicera japonica HOM05D005694 ORTHO05D007402 5.0e-97 359.0 285 68.1
CAN.G572.58 Capsicum annuum HOM05D005694 ORTHO05D007402 2.5e-96 356.7 277 65.0
HPP92_017700 Vanilla planifolia HOM05D005694 ORTHO05D007402 3.6e-95 352.8 320 59.1
SEGI_01647 Sequoiadendron giganteum HOM05D005694 ORTHO05D007402 2.6e-85 320.1 385 46.5
Mapoly0178s0018 Marchantia polymorpha HOM05D005694 ORTHO05D007402 1.3e-81 307.8 324 52.2
Aa31LG1G15830 Aethionema arabicum HOM05D005694 ORTHO05D007402 1.5e-80 304.3 225 64.4
Cre16.g671450 Chlamydomonas reinhardtii HOM05D005694 ORTHO05D007402 2.4e-75 287.0 389 42.7
FAN28G1711 Fragaria x ananassa HOM05D005694 ORTHO05D007402 2.7e-74 283.5 172 78.5
FAN28G1889 Fragaria x ananassa HOM05D005694 ORTHO05D007402 2.7e-74 283.5 172 78.5
MCO03G407 Micromonas commoda HOM05D005694 ORTHO05D007402 6.8e-62 242.3 378 41.0
Actinidia36463 Actinidia chinensis HOM05D005694 ORTHO05D007402 6.8e-54 215.7 166 63.9
MCO09G374 Micromonas commoda HOM05D005694 ORTHO05D007402 3.5e-50 203.4 410 37.3
Lj7A77T5 Lonicera japonica HOM05D005694 ORTHO05D007402 9.2e-43 178.7 112 74.1
Aa31LG1G15840 Aethionema arabicum HOM05D005694 ORTHO05D007402 1.6e-39 167.9 111 76.6
Cfa023451 Carpinus fangiana HOM05D000115 ORTHO05D005317 1.6e-39 167.9 406 33.3
Aa31LG1G18440 Aethionema arabicum HOM05D005694 ORTHO05D007402 1.3e-36 158.3 147 61.2
Aa31sc2295G20 Aethionema arabicum HOM05D005694 ORTHO05D007402 4.9e-36 156.4 137 62.0
PRCOL_00002834 Prasinoderma coloniale HOM05D005694 ORTHO05D007402 3.4e-29 133.7 391 32.0
Medtr8g072720 Medicago truncatula HOM05D005694 ORTHO05D007402 1.1e-27 128.6 83 73.5
BcaNung00805 Brassica carinata HOM05D005694 ORTHO05D007402 1.3e-12 78.6 89 52.8
Aa31LG1G18450 Aethionema arabicum HOM05D005694 ORTHO05D007402 3.3e-08 63.9 73 45.2
Aa31sc2295G10 Aethionema arabicum HOM05D005694 ORTHO05D007402 3.3e-08 63.9 73 45.2
Cfa026332 Carpinus fangiana HOM05D005694 ORTHO05D123404 3.7e-07 60.5 306 24.8
MBI16_g05839_MAGBIO Magnolia biondii HOM05D004578 ORTHO05D005529 1.4e-06 58.5 395 22.8
Os01g0594800 Oryza sativa ssp. japonica HOM05D005694 ORTHO05D007402 1.8e-06 58.2 114 37.7


User provided reference genes

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