Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H00350 Erythranthe guttata HOM05D006223 ORTHO05D009080 1.4e-111 406.4 216 100.0
MSTRG.23673 Avicennia marina HOM05D006223 ORTHO05D009080 5.0e-61 238.4 216 60.6
Dinv04050 Davidia involucrata HOM05D006223 ORTHO05D009080 3.4e-57 225.7 212 59.0
Actinidia11984 Actinidia chinensis HOM05D006223 ORTHO05D009080 7.1e-55 218.0 227 55.5
Lj7A96T45 Lonicera japonica HOM05D006223 ORTHO05D009080 1.6e-54 216.9 216 56.0
Atru.chr3.1008 Acer truncatum HOM05D006223 ORTHO05D009080 6.6e-53 211.5 225 53.3
CSS0009729 Camellia sinensis var. sinensis HOM05D006223 ORTHO05D009080 1.1e-52 210.7 194 58.8
Nitab4.5_0000142g0070 Nicotiana tabacum HOM05D006223 ORTHO05D009080 1.2e-51 207.2 214 53.7
DCAR_025799 Daucus carota HOM05D006223 ORTHO05D009080 4.7e-51 205.3 204 54.4
CAN.G1075.35 Capsicum annuum HOM05D006223 ORTHO05D009080 6.2e-51 204.9 218 53.2
Eucgr.I00706 Eucalyptus grandis HOM05D006223 ORTHO05D009080 1.4e-50 203.8 213 50.7
HanXRQChr15g0472641 Helianthus annuus HOM05D006223 ORTHO05D009080 2.3e-50 203.0 213 57.3
Lsat_1_v5_gn_3_86181 Lactuca sativa HOM05D006223 ORTHO05D009080 4.0e-50 202.2 213 54.5
Medtr4g097030 Medicago truncatula HOM05D006223 ORTHO05D009080 4.0e-50 202.2 205 51.2
Aqoxy5G00869 Aquilegia oxysepala HOM05D006223 ORTHO05D009080 5.2e-50 201.8 214 53.3
Cc06_g22830 Coffea canephora HOM05D006223 ORTHO05D009080 5.2e-50 201.8 201 55.2
GSVIVG01000109001 Vitis vinifera HOM05D006223 ORTHO05D009080 6.8e-50 201.4 216 52.8
TPR.G24252 Trifolium pratense HOM05D006223 ORTHO05D009080 3.4e-49 199.1 204 53.4
Psat4g081960 Pisum sativum HOM05D006223 ORTHO05D009080 5.8e-49 198.4 203 52.2
Lj4g0019733 Lotus japonicus HOM05D006223 ORTHO05D009080 9.9e-49 197.6 210 50.5
Nn5g30588 Nelumbo nucifera HOM05D006223 ORTHO05D009080 9.9e-49 197.6 222 50.5
Sed0023944 Sechium edule HOM05D006223 ORTHO05D009080 9.9e-49 197.6 213 50.2
TWI09G0585 Tripterygium wilfordii HOM05D006223 ORTHO05D009080 1.3e-48 197.2 210 53.3
TAR625G1165 Trochodendron aralioides HOM05D006223 ORTHO05D009080 1.7e-48 196.8 215 52.1
Ca_22107_v3 Cicer arietinum L. HOM05D006223 ORTHO05D009080 2.9e-48 196.1 207 51.7
Ca_22114_v3 Cicer arietinum L. HOM05D006223 ORTHO05D009080 2.9e-48 196.1 207 51.7
Haze_15285 Corylus avellana HOM05D006223 ORTHO05D009080 2.9e-48 196.1 226 50.0
CANSAT01G0277 Cannabis sativa HOM05D006223 ORTHO05D009080 3.8e-48 195.7 207 54.6
TWI73G0604 Tripterygium wilfordii HOM05D006223 ORTHO05D009080 3.8e-48 195.7 205 52.2
ECA246G3554 Erigeron canadensis HOM05D006223 ORTHO05D009080 6.4e-48 194.9 209 55.5
Glyma.17G160900 Glycine max HOM05D006223 ORTHO05D009080 8.4e-48 194.5 211 51.2
Nitab4.5_0002119g0100 Nicotiana tabacum HOM05D006223 ORTHO05D009080 1.9e-47 193.4 216 51.4
Lalb_Chr05g0225861 Lupinus albus HOM05D006223 ORTHO05D009080 4.1e-47 192.2 206 51.0
Cpa.g.sc6.19 Carica papaya HOM05D006223 ORTHO05D009080 9.2e-47 191.0 217 50.7
Thecc.01G072400 Theobroma cacao HOM05D006223 ORTHO05D009080 1.2e-46 190.7 231 45.9
PSO170G6824 Papaver somniferum HOM05D006223 ORTHO05D009080 2.1e-46 189.9 212 51.9
GSVIVG01000118001 Vitis vinifera HOM05D006223 ORTHO05D009080 3.5e-46 189.1 208 50.5
Duzib147G0613 Durio zibethinus HOM05D006223 ORTHO05D009080 4.6e-46 188.7 226 46.9
Sabra01G0139200 Salix brachista HOM05D006223 ORTHO05D009080 7.8e-46 188.0 211 51.2
PGSC0003DMG400021418 Solanum tuberosum HOM05D006223 ORTHO05D009080 7.8e-46 188.0 224 49.6
Ciclev10026365m.g Citrus clementina HOM05D006223 ORTHO05D009080 1.0e-45 187.6 213 49.3
Glyma.05G105500 Glycine max HOM05D006223 ORTHO05D009080 1.3e-45 187.2 207 49.3
MELO3C020909.2 Cucumis melo HOM05D006223 ORTHO05D009080 1.7e-45 186.8 206 49.5
Phvul.003G235100 Phaseolus vulgaris HOM05D006223 ORTHO05D009080 3.0e-45 186.0 205 49.8
Gohir.A11G215000 Gossypium hirsutum HOM05D006223 ORTHO05D009080 1.9e-44 183.3 225 44.9
Hund16399 Selenicereus undatus HOM05D006223 ORTHO05D009080 1.9e-44 183.3 215 48.4
Solyc02g092390.3 Solanum lycopersicum HOM05D006223 ORTHO05D009080 1.2e-43 180.6 228 48.2
RcHm_v2.0_Chr2g0108001 Rosa chinensis HOM05D006223 ORTHO05D009080 2.8e-43 179.5 206 51.5
FAN19G0818 Fragaria x ananassa HOM05D006223 ORTHO05D009080 3.6e-43 179.1 202 52.0
FvH4_1g17670 Fragaria vesca HOM05D006223 ORTHO05D009080 4.7e-43 178.7 203 51.7
Peaxi162Scf00548g00643 Petunia axillaris HOM05D006223 ORTHO05D009080 4.7e-43 178.7 202 50.0
FAN28G1261 Fragaria x ananassa HOM05D006223 ORTHO05D009080 8.1e-43 177.9 204 51.5
AUR62040240 Chenopodium quinoa HOM05D006223 ORTHO05D009080 1.1e-42 177.6 209 49.8
Manes.12G113900 Manihot esculenta HOM05D006223 ORTHO05D009080 1.1e-42 177.6 211 48.3
VMungo0251G3324 Vigna mungo HOM05D006223 ORTHO05D009080 1.4e-42 177.2 205 49.3
vmacro05408 Vaccinium macrocarpon HOM05D006223 ORTHO05D009080 1.8e-42 176.8 311 41.2
FAN26G2055 Fragaria x ananassa HOM05D006223 ORTHO05D009080 2.4e-42 176.4 204 51.5
Sopen02g036940 Solanum pennellii HOM05D006223 ORTHO05D009080 2.4e-42 176.4 207 48.8
Gorai.007G223400 Gossypium raimondii HOM05D006223 ORTHO05D009080 4.0e-42 175.6 214 44.9
Zm00001eb400790 Zea mays HOM05D006223 ORTHO05D009080 6.9e-42 174.9 202 50.5
Prupe.6G221000 Prunus persica HOM05D006223 ORTHO05D009080 8.9e-42 174.5 212 50.5
PGR004G2352 Punica granatum HOM05D006223 ORTHO05D009080 8.9e-42 174.5 185 51.4
Rhsim10G0099700 Rhododendron simsii HOM05D006223 ORTHO05D009080 1.2e-41 174.1 242 49.2
Gohir.D11G208400 Gossypium hirsutum HOM05D006223 ORTHO05D009080 3.4e-41 172.6 214 44.9
CiPaw.01G004700 Carya illinoinensis HOM05D006223 ORTHO05D009080 4.4e-41 172.2 176 51.1
Potri.001G172500 Populus trichocarpa HOM05D006223 ORTHO05D009080 7.6e-41 171.4 202 47.0
arahy.Tifrunner.gnm1.ann1.BP3FRD Arachis hypogaea HOM05D006223 ORTHO05D009080 2.2e-40 169.9 210 47.6
Cfa004130 Carpinus fangiana HOM05D006223 ORTHO05D009080 8.4e-40 167.9 147 56.5
SGA_v2.0_scaffold72G24074 Striga asiatica HOM05D006223 ORTHO05D009080 8.4e-40 167.9 158 56.3
AUR62004007 Chenopodium quinoa HOM05D006223 ORTHO05D009080 1.1e-39 167.5 196 50.5
ClCG02G012630 Citrullus lanatus HOM05D003401 ORTHO05D003906 4.2e-39 165.6 196 48.0
THA.LOC104827599 Tarenaya hassleriana HOM05D006223 ORTHO05D009080 2.7e-38 162.9 215 43.7
MD15G1297100 Malus domestica HOM05D006223 ORTHO05D009080 3.5e-38 162.5 159 54.1
Ah.03g140550 Amaranthus hybridus HOM05D006223 ORTHO05D009080 1.3e-37 160.6 194 48.5
CDE06G0771 Ceratophyllum demersum HOM05D006223 ORTHO05D009080 1.7e-37 160.2 210 45.7
HPP92_024913 Vanilla planifolia HOM05D006223 ORTHO05D009080 6.6e-37 158.3 215 46.5
AT3G49890 Arabidopsis thaliana HOM05D006223 ORTHO05D009080 5.6e-36 155.2 205 42.4
arahy.Tifrunner.gnm1.ann1.83HTFG Arachis hypogaea HOM05D006223 ORTHO05D009080 3.6e-35 152.5 242 41.7
AL5G29900 Arabidopsis lyrata HOM05D006223 ORTHO05D009080 4.8e-35 152.1 205 41.5
ATR1153G042 Amborella trichopoda HOM05D006223 ORTHO05D009080 9.9e-33 144.4 209 45.0
Os03g0201200 Oryza sativa ssp. japonica HOM05D006223 ORTHO05D009080 1.7e-32 143.7 203 44.8
Aa31LG4G18340 Aethionema arabicum HOM05D006223 ORTHO05D009080 6.4e-32 141.7 205 38.5
CARHR158970 Cardamine hirsuta HOM05D006223 ORTHO05D009080 8.4e-32 141.4 209 38.3
Hma1.2p1_0852F.1_g228470 Hydrangea macrophylla HOM05D006223 ORTHO05D009080 8.4e-32 141.4 115 63.5
Thhalv10010709m.g Eutrema salsugineum HOM05D006223 ORTHO05D009080 3.2e-31 139.4 209 39.2
Sp5g12220 Schrenkiella parvula HOM05D006223 ORTHO05D009080 1.2e-30 137.5 209 39.2
Carub.0005s1625 Capsella rubella HOM05D006223 ORTHO05D009080 6.0e-30 135.2 209 38.3
A03p47580 Brassica napus HOM05D006223 ORTHO05D009080 3.3e-28 129.4 215 37.7
BraA03t13871Z Brassica rapa HOM05D006223 ORTHO05D009080 9.6e-28 127.9 217 37.8
C07p45560 Brassica napus HOM05D006223 ORTHO05D009080 1.6e-27 127.1 161 41.6
BolC7t45077H Brassica oleracea HOM05D006223 ORTHO05D009080 1.6e-27 127.1 161 41.6
CSS0032370 Camellia sinensis var. sinensis HOM05D006223 ORTHO05D009080 9.0e-26 121.3 101 65.3
EL10Ac6g15621 Beta vulgaris HOM05D006223 ORTHO05D009080 2.0e-25 120.2 157 44.6
Sc16g0002890 Simmondsia chinensis HOM05D006223 ORTHO05D009080 1.0e-21 107.8 149 45.0
SEGI_10369 Sequoiadendron giganteum HOM05D006223 ORTHO05D009080 5.6e-20 102.1 146 42.5
unitig_21.g20422 Utricularia gibba HOM05D005082 ORTHO05D006474 1.6e-19 100.5 185 42.2
COL.COLO4_11574 Corchorus olitorius HOM05D006223 ORTHO05D009080 5.3e-18 95.5 147 40.1
AagrBONN_evm.TU.Sc2ySwM_228.3102 Anthoceros agrestis HOM05D004796 ORTHO05D006527 3.2e-15 86.3 163 36.8
SHI12778 Sapria himalayana HOM05D006223 ORTHO05D009080 7.1e-15 85.1 194 35.1
FAN23G0832 Fragaria x ananassa HOM05D006223 ORTHO05D009080 1.8e-13 80.5 123 41.5
Pp3c5_6560 Physcomitrium patens HOM05D006223 ORTHO05D009080 5.1e-13 79.0 234 32.1
HPP92_024909 Vanilla planifolia HOM05D006223 ORTHO05D009080 7.4e-12 75.1 214 33.2
BolC8t50110H Brassica oleracea HOM05D006223 ORTHO05D009080 4.1e-10 69.3 165 29.7
C08p24920 Brassica napus HOM05D006223 ORTHO05D009080 9.0e-10 68.2 162 29.0
BcaB05g23172 Brassica carinata HOM05D006223 ORTHO05D009080 1.2e-09 67.8 131 32.1
CSS0023916 Camellia sinensis var. sinensis HOM05D006223 ORTHO05D009080 2.2e-08 63.5 53 54.7


User provided reference genes

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