Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H00333 Erythranthe guttata HOM05D005432 ORTHO05D004599 1.4e-71 273.1 162 100.0
SalBow5G2133 Salvia bowleyana HOM05D005432 ORTHO05D004599 3.6e-27 125.6 126 52.4
Migut.L00424 Erythranthe guttata HOM05D005432 ORTHO05D004599 3.1e-23 112.5 137 50.4
SGA_v2.0_scaffold15G07481 Striga asiatica HOM05D005432 ORTHO05D004599 1.2e-22 110.5 124 50.0
TWI77G0559 Tripterygium wilfordii HOM05D005432 ORTHO05D004599 2.6e-17 92.8 117 50.4
Migut.L00423 Erythranthe guttata HOM05D005432 ORTHO05D004599 9.8e-17 90.9 146 42.5
Gohir.A11G048800 Gossypium hirsutum HOM05D005432 ORTHO05D004599 1.3e-16 90.5 144 41.7
Gohir.D11G052400 Gossypium hirsutum HOM05D005432 ORTHO05D004599 1.3e-16 90.5 144 41.7
Gorai.007G056800 Gossypium raimondii HOM05D005432 ORTHO05D004599 1.3e-16 90.5 144 41.7
QL06p039087 Quercus lobata HOM05D005432 ORTHO05D004599 1.7e-16 90.1 147 41.5
Sabra07G0004500 Salix brachista HOM05D005432 ORTHO05D004599 3.7e-16 89.0 145 40.0
Thecc.01G075000 Theobroma cacao HOM05D005432 ORTHO05D004599 4.8e-16 88.6 149 39.6
Oeu021446.1 Olea europaea HOM05D005432 ORTHO05D004599 8.3e-16 87.8 147 42.9
Potri.014G006400 Populus trichocarpa HOM05D005432 ORTHO05D004599 8.3e-16 87.8 155 39.4
TWI74G0597 Tripterygium wilfordii HOM05D005432 ORTHO05D004599 8.3e-16 87.8 126 47.6
Sabra14G0006100 Salix brachista HOM05D005432 ORTHO05D004599 1.1e-15 87.4 155 39.4
CiPaw.01G002700 Carya illinoinensis HOM05D005432 ORTHO05D004599 1.4e-15 87.0 131 39.7
Duzib187G0823 Durio zibethinus HOM05D005432 ORTHO05D004599 2.4e-15 86.3 150 37.3
Potri.007G006200 Populus trichocarpa HOM05D005432 ORTHO05D004599 3.1e-15 85.9 154 39.0
Gorai.007G225500 Gossypium raimondii HOM05D005432 ORTHO05D004599 5.4e-15 85.1 140 40.7
Manes.12G116300 Manihot esculenta HOM05D005432 ORTHO05D004599 5.4e-15 85.1 148 39.9
Oeu011980.1 Olea europaea HOM05D005432 ORTHO05D004599 7.0e-15 84.7 138 43.5
CiPaw.02G001400 Carya illinoinensis HOM05D005432 ORTHO05D004599 1.2e-14 84.0 135 43.7
Duzib147G0737 Durio zibethinus HOM05D005432 ORTHO05D004599 1.2e-14 84.0 153 38.6
Gohir.A11G213000 Gossypium hirsutum HOM05D005432 ORTHO05D004599 1.6e-14 83.6 138 39.9
DCAR_010807 Daucus carota HOM05D005432 ORTHO05D004599 2.0e-14 83.2 125 43.2
Duzib264G0647 Durio zibethinus HOM05D005432 ORTHO05D004599 2.0e-14 83.2 150 40.0
PGSC0003DMG400012977 Solanum tuberosum HOM05D005432 ORTHO05D004599 5.9e-14 81.6 167 37.7
Manes.13G109800 Manihot esculenta HOM05D005432 ORTHO05D004599 7.7e-14 81.3 95 52.6
TAR381G0486 Trochodendron aralioides HOM05D005432 ORTHO05D004599 1.0e-13 80.9 144 43.1
Gohir.D11G210200 Gossypium hirsutum HOM05D005432 ORTHO05D004599 1.7e-13 80.1 140 40.0
TAR628G1364 Trochodendron aralioides HOM05D005432 ORTHO05D004599 1.7e-13 80.1 147 40.8
Dinv23035 Davidia involucrata HOM05D005432 ORTHO05D004599 3.8e-13 79.0 140 43.6
Ciclev10026545m.g Citrus clementina HOM05D005432 ORTHO05D004599 5.0e-13 78.6 159 37.7
CAN.G1830.1 Capsicum annuum HOM05D005432 ORTHO05D004599 6.5e-13 78.2 151 37.7
COL.COLO4_11602 Corchorus olitorius HOM05D005432 ORTHO05D004599 6.5e-13 78.2 132 39.4
Solyc09g008750.1 Solanum lycopersicum HOM05D005432 ORTHO05D004599 1.1e-12 77.4 169 36.7
Gohir.A12G078000 Gossypium hirsutum HOM05D005432 ORTHO05D004599 1.9e-12 76.6 147 37.4
Gohir.D12G076200 Gossypium hirsutum HOM05D005432 ORTHO05D004599 3.2e-12 75.9 147 36.7
Gorai.008G084600 Gossypium raimondii HOM05D005432 ORTHO05D004599 3.2e-12 75.9 147 36.7
Sopen09g003540 Solanum pennellii HOM05D005432 ORTHO05D004599 3.2e-12 75.9 156 37.2
Actinidia11967 Actinidia chinensis HOM05D005432 ORTHO05D004599 4.2e-12 75.5 157 39.5
Nitab4.5_0008385g0020 Nicotiana tabacum HOM05D005432 ORTHO05D004599 4.2e-12 75.5 174 35.1
TAR625G0570 Trochodendron aralioides HOM05D005432 ORTHO05D004599 4.2e-12 75.5 146 39.7
Peaxi162Scf00500g00034 Petunia axillaris HOM05D005432 ORTHO05D004599 9.5e-12 74.3 186 35.5
Atru.chr3.1044 Acer truncatum HOM05D005432 ORTHO05D004599 1.6e-11 73.6 145 42.1
ClCG01G017720 Citrullus lanatus HOM05D005432 ORTHO05D004599 2.1e-11 73.2 130 40.8
Nitab4.5_0000680g0130 Nicotiana tabacum HOM05D005432 ORTHO05D004599 2.1e-11 73.2 184 32.6
MELO3C007650.2 Cucumis melo HOM05D005432 ORTHO05D004599 2.7e-11 72.8 125 42.4
MBI16_g39101_MAGBIO Magnolia biondii HOM05D005432 ORTHO05D004599 2.7e-11 72.8 135 40.0
Lsat_1_v5_gn_4_160141 Lactuca sativa HOM05D005432 ORTHO05D004599 4.7e-11 72.0 179 31.3
Nitab4.5_0008385g0010 Nicotiana tabacum HOM05D005432 ORTHO05D004599 4.7e-11 72.0 175 34.3
Rhsim08G0092400 Rhododendron simsii HOM05D005432 ORTHO05D004599 4.7e-11 72.0 110 40.9
PGSC0003DMG400002732 Solanum tuberosum HOM05D005432 ORTHO05D004599 4.7e-11 72.0 190 32.6
PGSC0003DMG400003320 Solanum tuberosum HOM05D005432 ORTHO05D004599 6.1e-11 71.6 163 35.6
FvH4_1g18020 Fragaria vesca HOM05D005432 ORTHO05D004599 8.0e-11 71.2 153 35.9
FAN19G1119 Fragaria x ananassa HOM05D005432 ORTHO05D004599 8.0e-11 71.2 153 35.9
FAN23G2070 Fragaria x ananassa HOM05D005432 ORTHO05D004599 8.0e-11 71.2 152 35.5
TAR376G0425 Trochodendron aralioides HOM05D005432 ORTHO05D004599 1.0e-10 70.9 146 40.4
CANSAT01G2351 Cannabis sativa HOM05D005432 ORTHO05D004599 1.8e-10 70.1 167 36.5
CsaV3_6G044250 Cucumis sativus L. HOM05D005432 ORTHO05D004599 2.3e-10 69.7 112 43.8
ECA232G3846 Erigeron canadensis HOM05D005432 ORTHO05D004599 2.3e-10 69.7 178 33.1
MD02G1188600 Malus domestica HOM05D005432 ORTHO05D004599 2.3e-10 69.7 147 39.5
Sed0012898 Sechium edule HOM05D005432 ORTHO05D004599 2.3e-10 69.7 126 38.9
Solyc09g008760.1 Solanum lycopersicum HOM05D005432 ORTHO05D004599 3.0e-10 69.3 197 31.5
Rhsim10G0095000 Rhododendron simsii HOM05D005432 ORTHO05D004599 4.0e-10 68.9 133 39.1
RcHm_v2.0_Chr2g0108511 Rosa chinensis HOM05D005432 ORTHO05D004599 4.0e-10 68.9 154 37.0
FAN26G1008 Fragaria x ananassa HOM05D005432 ORTHO05D004599 5.2e-10 68.6 150 35.3
Solyc09g008740.1 Solanum lycopersicum HOM05D005432 ORTHO05D004599 5.2e-10 68.6 173 32.4
FAN28G2020 Fragaria x ananassa HOM05D005432 ORTHO05D004599 6.8e-10 68.2 91 46.2
Nitab4.5_0000680g0150 Nicotiana tabacum HOM05D005432 ORTHO05D004599 6.8e-10 68.2 167 33.5
Prupe.6G218300 Prunus persica HOM05D005432 ORTHO05D004599 6.8e-10 68.2 102 44.1
Hma1.2p1_0424F.1_g150570 Hydrangea macrophylla HOM05D005432 ORTHO05D004599 8.8e-10 67.8 70 55.7
CAN.G1830.3 Capsicum annuum HOM05D005432 ORTHO05D004599 1.2e-09 67.4 173 31.8
Rhsim10G0095100 Rhododendron simsii HOM05D005432 ORTHO05D004599 1.5e-09 67.0 109 43.1
Phvul.002G009700 Phaseolus vulgaris HOM05D005432 ORTHO05D004599 2.0e-09 66.6 119 42.9
PGSC0003DMG400012978 Solanum tuberosum HOM05D005432 ORTHO05D004599 2.6e-09 66.2 175 32.6
Hma1.2p1_1085F.1_g255410 Hydrangea macrophylla HOM05D005432 ORTHO05D004599 5.7e-09 65.1 133 38.3
PGR102G0812 Punica granatum HOM05D005432 ORTHO05D004599 5.7e-09 65.1 168 35.1
Sopen02g014700 Solanum pennellii HOM05D005432 ORTHO05D004599 1.3e-08 63.9 167 37.1
Solyc02g064570.2 Solanum lycopersicum HOM05D005432 ORTHO05D004599 3.7e-08 62.4 166 36.7
Sopen09g003530 Solanum pennellii HOM05D005432 ORTHO05D004599 4.9e-08 62.0 177 30.5
VMungo1215G3148 Vigna mungo HOM05D005432 ORTHO05D004599 4.9e-08 62.0 126 40.5
Phvul.003G233700 Phaseolus vulgaris HOM05D005432 ORTHO05D004599 6.3e-08 61.6 66 54.5
Sopen09g003550 Solanum pennellii HOM05D005432 ORTHO05D004599 6.3e-08 61.6 182 30.8
MELO3C020843.2 Cucumis melo HOM05D005432 ORTHO05D004599 1.1e-07 60.8 85 47.1
AT2G22880 Arabidopsis thaliana HOM05D009364 ORTHO05D004599 1.4e-07 60.5 117 36.8
CsaV3_2G016320 Cucumis sativus L. HOM05D005432 ORTHO05D004599 1.4e-07 60.5 63 52.4
Eucgr.H02317 Eucalyptus grandis HOM05D005432 ORTHO05D004599 1.4e-07 60.5 143 35.7
MD02G1188700 Malus domestica HOM05D005432 ORTHO05D004599 1.8e-07 60.1 71 52.1
AL4G12470 Arabidopsis lyrata HOM05D009364 ORTHO05D004599 2.4e-07 59.7 118 37.3
Prupe.6G218200 Prunus persica HOM05D005432 ORTHO05D004599 2.4e-07 59.7 70 48.6
Peaxi162Scf00449g00414 Petunia axillaris HOM05D005432 ORTHO05D004599 3.1e-07 59.3 166 34.9
Cc07_g07280 Coffea canephora HOM05D005432 ORTHO05D004599 4.1e-07 58.9 193 31.6
VMungo0251G2573 Vigna mungo HOM05D005432 ORTHO05D004599 4.1e-07 58.9 127 40.2
Carub.0004s0201 Capsella rubella HOM05D009364 ORTHO05D004599 5.4e-07 58.5 118 36.4
Haze_15264 Corylus avellana HOM05D005432 ORTHO05D004599 5.4e-07 58.5 63 58.7
Medtr4g097360 Medicago truncatula HOM05D005432 ORTHO05D004599 7.0e-07 58.2 61 54.1
Cfa004151 Carpinus fangiana HOM05D005432 ORTHO05D004599 1.2e-06 57.4 70 54.3
Lsat_1_v5_gn_4_160241 Lactuca sativa HOM05D005432 ORTHO05D004599 1.2e-06 57.4 180 32.2
CAN.G775.5 Capsicum annuum HOM05D005432 ORTHO05D004599 1.6e-06 57.0 159 35.8
Ca_22097_v3 Cicer arietinum L. HOM05D005432 ORTHO05D004599 2.7e-06 56.2 59 54.2
AUR62007532 Chenopodium quinoa HOM05D022777 ORTHO05D004599 3.5e-06 55.8 158 32.9
Glyma.01G195300 Glycine max HOM05D005432 ORTHO05D004599 3.5e-06 55.8 94 40.4
AL3G48200 Arabidopsis lyrata HOM05D009364 ORTHO05D004599 4.5e-06 55.5 118 36.4
Eucgr.H02318 Eucalyptus grandis HOM05D005432 ORTHO05D004599 4.5e-06 55.5 53 54.7
Nn5g30641 Nelumbo nucifera HOM05D005432 ORTHO05D004599 4.5e-06 55.5 79 50.6
Lsat_1_v5_gn_4_160281 Lactuca sativa HOM05D005432 ORTHO05D004599 5.9e-06 55.1 118 39.8
TPR.G24237 Trifolium pratense HOM05D005432 ORTHO05D004599 5.9e-06 55.1 63 52.4
Lsat_1_v5_gn_4_160361 Lactuca sativa HOM05D005432 ORTHO05D004599 7.7e-06 54.7 169 27.2


User provided reference genes

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