Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H00123 Erythranthe guttata HOM05D007293 ORTHO05D009143 5.7e-50 200.7 105 100.0
MSTRG.24016 Avicennia marina HOM05D007293 ORTHO05D009143 7.9e-36 153.7 105 80.0
SalBow1G2453 Salvia bowleyana HOM05D005882 ORTHO05D009143 2.6e-31 138.7 97 76.3
Migut.K01369 Erythranthe guttata HOM05D007293 ORTHO05D009143 5.0e-30 134.4 106 72.6
Oeu062917.1 Olea europaea HOM05D007293 ORTHO05D009143 8.0e-28 127.1 101 72.3
Dinv33495 Davidia involucrata HOM05D007293 ORTHO05D009143 7.5e-26 120.6 112 65.2
Cc07_g02290 Coffea canephora HOM05D007293 ORTHO05D009143 2.8e-25 118.6 101 67.3
Lj7A591G78 Lonicera japonica HOM05D007293 ORTHO05D009143 6.3e-25 117.5 106 64.2
Dinv35058 Davidia involucrata HOM05D007293 ORTHO05D009143 5.9e-23 110.9 111 60.4
CSS0045153 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 7.7e-23 110.5 110 64.5
GSVIVG01032483001 Vitis vinifera HOM05D007293 ORTHO05D009143 8.5e-22 107.1 111 59.5
CSS0040497 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 7.2e-21 104.0 107 60.7
CSS0015603 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 8.0e-20 100.5 107 58.9
Rhsim10G0022800 Rhododendron simsii HOM05D007293 ORTHO05D009143 1.8e-19 99.4 105 60.0
vmacro05819 Vaccinium macrocarpon HOM05D007293 ORTHO05D009143 6.8e-19 97.4 106 58.5
CSS0001505 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 1.3e-17 93.2 107 54.2
CSS0016211 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 1.7e-17 92.8 104 57.7
Hma1.2p1_0802F.1_g220360 Hydrangea macrophylla HOM05D007293 ORTHO05D009143 1.7e-17 92.8 111 60.4
DCAR_011205 Daucus carota HOM05D007293 ORTHO05D009143 3.1e-16 88.6 109 56.9
Actinidia06026 Actinidia chinensis HOM05D007293 ORTHO05D009143 1.2e-15 86.7 56 76.8
CSS0049977 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 2.7e-15 85.5 103 53.4
MD16G1092500 Malus domestica HOM05D007293 ORTHO05D009143 7.7e-15 84.0 106 55.7
Psat2g106240 Pisum sativum HOM05D007293 ORTHO05D009143 7.7e-15 84.0 106 51.9
FvH4_4g34460 Fragaria vesca HOM05D007293 ORTHO05D009143 1.3e-14 83.2 107 53.3
Psat0s2875g0160 Pisum sativum HOM05D007293 ORTHO05D009143 1.3e-14 83.2 106 52.8
FAN17G1887 Fragaria x ananassa HOM05D007293 ORTHO05D009143 5.0e-14 81.3 106 51.9
FAN22G1529 Fragaria x ananassa HOM05D007293 ORTHO05D009143 5.0e-14 81.3 106 51.9
FAN12G1260 Fragaria x ananassa HOM05D007293 ORTHO05D009143 8.5e-14 80.5 106 52.8
MD13G1091900 Malus domestica HOM05D007293 ORTHO05D009143 8.5e-14 80.5 106 53.8
RcHm_v2.0_Chr4g0443851 Rosa chinensis HOM05D007293 ORTHO05D009143 8.5e-14 80.5 105 52.4
BcaC08g45820 Brassica carinata HOM05D007293 ORTHO05D009143 1.1e-13 80.1 105 49.5
Lsat_1_v5_gn_4_182280 Lactuca sativa HOM05D007293 ORTHO05D009143 1.1e-13 80.1 106 54.7
Atru.chr11.2025 Acer truncatum HOM05D007293 ORTHO05D009143 1.5e-13 79.7 110 51.8
TWI75G0451 Tripterygium wilfordii HOM05D007293 ORTHO05D009143 1.5e-13 79.7 109 51.4
EL10Ac6g13673 Beta vulgaris HOM05D007293 ORTHO05D009143 1.9e-13 79.3 113 52.2
Sp5g25470 Schrenkiella parvula HOM05D007293 ORTHO05D009143 3.2e-13 78.6 112 52.7
PGR119G0124 Punica granatum HOM05D007293 ORTHO05D009143 4.2e-13 78.2 107 51.4
RcHm_v2.0_Chr4g0443841 Rosa chinensis HOM05D007293 ORTHO05D009143 4.2e-13 78.2 110 50.9
Carub.0002s1704 Capsella rubella HOM05D007293 ORTHO05D009143 5.5e-13 77.8 110 51.8
CARHR063530 Cardamine hirsuta HOM05D007293 ORTHO05D009143 5.5e-13 77.8 113 51.3
ECA246G2262 Erigeron canadensis HOM05D007293 ORTHO05D009143 5.5e-13 77.8 82 58.5
HanXRQChr08g0220621 Helianthus annuus HOM05D007293 ORTHO05D009143 5.5e-13 77.8 105 52.4
PSO063G5020 Papaver somniferum HOM05D007293 ORTHO05D009143 5.5e-13 77.8 100 51.0
Prupe.1G253900 Prunus persica HOM05D007293 ORTHO05D009143 5.5e-13 77.8 107 52.3
Nn3g16892 Nelumbo nucifera HOM05D007293 ORTHO05D009143 7.2e-13 77.4 53 73.6
CANSAT01G1482 Cannabis sativa HOM05D007293 ORTHO05D009143 9.5e-13 77.0 109 50.5
Ciclev10033010m.g Citrus clementina HOM05D007293 ORTHO05D009143 9.5e-13 77.0 110 50.9
Eucgr.H02610 Eucalyptus grandis HOM05D007293 ORTHO05D009143 1.2e-12 76.6 116 47.4
TAR622G0242 Trochodendron aralioides HOM05D007293 ORTHO05D009143 1.2e-12 76.6 108 49.1
AL2G29660 Arabidopsis lyrata HOM05D007293 ORTHO05D009143 1.6e-12 76.3 110 50.9
AT1G70350 Arabidopsis thaliana HOM05D007293 ORTHO05D009143 1.6e-12 76.3 110 50.9
THA.LOC104822141 Tarenaya hassleriana HOM05D007293 ORTHO05D009143 2.7e-12 75.5 110 50.9
Cfa009144 Carpinus fangiana HOM05D007293 ORTHO05D009143 3.6e-12 75.1 107 52.3
Aqoxy3G02974 Aquilegia oxysepala HOM05D007293 ORTHO05D009143 4.7e-12 74.7 110 50.0
BcaC03g15179 Brassica carinata HOM05D007293 ORTHO05D009143 6.1e-12 74.3 107 51.4
Thhalv10019350m.g Eutrema salsugineum HOM05D007293 ORTHO05D009143 8.0e-12 73.9 110 50.9
Lj2g0011400 Lotus japonicus HOM05D007293 ORTHO05D009143 8.0e-12 73.9 109 48.6
THA.LOC104808972 Tarenaya hassleriana HOM05D007293 ORTHO05D009143 8.0e-12 73.9 110 51.8
Hund05995 Selenicereus undatus HOM05D007293 ORTHO05D009143 1.8e-11 72.8 116 47.4
HPP92_019952 Vanilla planifolia HOM05D007293 ORTHO05D009143 2.3e-11 72.4 48 77.1
BcaB03g15542 Brassica carinata HOM05D007293 ORTHO05D009143 4.0e-11 71.6 114 54.4
A02p16490 Brassica napus HOM05D007293 ORTHO05D009143 5.2e-11 71.2 106 48.1
BraA02t06707Z Brassica rapa HOM05D007293 ORTHO05D009143 5.2e-11 71.2 106 48.1
BolC6t38732H Brassica oleracea HOM05D007293 ORTHO05D009143 6.8e-11 70.9 103 45.6
Manes.13G030700 Manihot esculenta HOM05D007293 ORTHO05D009143 6.8e-11 70.9 112 48.2
CiPaw.05G150900 Carya illinoinensis HOM05D007293 ORTHO05D009143 8.8e-11 70.5 106 51.9
Duzib268G1575 Durio zibethinus HOM05D007293 ORTHO05D009143 8.8e-11 70.5 109 49.5
C06p36130 Brassica napus HOM05D007293 ORTHO05D009143 1.5e-10 69.7 103 45.6
Haze_12178 Corylus avellana HOM05D007293 ORTHO05D009143 1.5e-10 69.7 106 49.1
BcaB05g24561 Brassica carinata HOM05D007293 ORTHO05D009143 2.0e-10 69.3 109 49.5
Duzib251G0045 Durio zibethinus HOM05D007293 ORTHO05D009143 2.0e-10 69.3 102 47.1
Glyma.02G034600 Glycine max HOM05D007293 ORTHO05D009143 2.6e-10 68.9 106 49.1
Phvul.002G071600 Phaseolus vulgaris HOM05D007293 ORTHO05D009143 2.6e-10 68.9 106 47.2
Thecc.02G249100 Theobroma cacao HOM05D007293 ORTHO05D009143 2.6e-10 68.9 109 49.5
C02p27590 Brassica napus HOM05D007293 ORTHO05D009143 3.4e-10 68.6 106 49.1
TPR.G13583 Trifolium pratense HOM05D007293 ORTHO05D009143 5.7e-10 67.8 111 45.9
MBI10_g11075_MAGBIO Magnolia biondii HOM05D007293 ORTHO05D009143 9.8e-10 67.0 55 69.1
PSO832G1108 Papaver somniferum HOM05D007293 ORTHO05D009143 9.8e-10 67.0 100 49.0
ClCG08G018060 Citrullus lanatus HOM05D007293 ORTHO05D009143 1.3e-09 66.6 97 49.5
Os01g0738000 Oryza sativa ssp. japonica HOM05D007293 ORTHO05D009143 1.3e-09 66.6 95 50.5
Sc04g0009130 Simmondsia chinensis HOM05D007293 ORTHO05D009143 1.3e-09 66.6 105 47.6
TPR.G13591 Trifolium pratense HOM05D007293 ORTHO05D009143 1.3e-09 66.6 106 50.9
PSO339G0117 Papaver somniferum HOM05D007293 ORTHO05D009143 2.2e-09 65.9 76 56.6
Lalb_Chr09g0326381 Lupinus albus HOM05D007293 ORTHO05D009143 2.8e-09 65.5 106 48.1
CDE04G1122 Ceratophyllum demersum HOM05D007293 ORTHO05D009143 3.7e-09 65.1 68 58.8
AUR62014041 Chenopodium quinoa HOM05D007293 ORTHO05D009143 4.9e-09 64.7 104 46.2
Gohir.A03G139900 Gossypium hirsutum HOM05D007293 ORTHO05D009143 4.9e-09 64.7 109 46.8
BolC2t08814H Brassica oleracea HOM05D007293 ORTHO05D009143 1.1e-08 63.5 106 45.3
CDE06G2495 Ceratophyllum demersum HOM05D007293 ORTHO05D009143 1.4e-08 63.2 68 57.4
COL.COLO4_36768 Corchorus olitorius HOM05D007293 ORTHO05D009143 1.4e-08 63.2 103 47.6
Prupe.5G015600 Prunus persica HOM05D007293 ORTHO05D009143 1.8e-08 62.8 100 48.0
Gorai.005G182700 Gossypium raimondii HOM05D007293 ORTHO05D009143 2.4e-08 62.4 109 45.0
AUR62005378 Chenopodium quinoa HOM05D007293 ORTHO05D009143 3.1e-08 62.0 103 47.6
Gohir.D02G162700 Gossypium hirsutum HOM05D007293 ORTHO05D009143 3.1e-08 62.0 109 45.0
Ciclev10023003m.g Citrus clementina HOM05D006762 ORTHO05D003505 4.1e-08 61.6 100 44.0
FAN07G2443 Fragaria x ananassa HOM05D007293 ORTHO05D009143 4.1e-08 61.6 88 50.0
CsaV3_4G037870 Cucumis sativus L. HOM05D001719 ORTHO05D008883 7.0e-08 60.8 104 44.2
Medtr5g034340 Medicago truncatula HOM05D007293 ORTHO05D009143 7.0e-08 60.8 100 49.0
VMungo1215G2593 Vigna mungo HOM05D007293 ORTHO05D009143 9.2e-08 60.5 101 42.6
A07p31100 Brassica napus HOM05D007293 ORTHO05D009143 4.5e-07 58.2 104 44.2
BraA07t30744Z Brassica rapa HOM05D007293 ORTHO05D009143 4.5e-07 58.2 104 44.2
BcaB07g33183 Brassica carinata HOM05D027076 ORTHO05D027107 5.9e-07 57.8 81 46.9
Ca_13998_v3 Cicer arietinum L. HOM05D007293 ORTHO05D009143 7.7e-07 57.4 103 42.7
arahy.Tifrunner.gnm1.ann1.F37JRW Arachis hypogaea HOM05D007293 ORTHO05D009143 2.3e-06 55.8 102 45.1
Manes.03G022800 Manihot esculenta HOM05D007491 ORTHO05D009489 2.9e-06 55.5 99 39.4
arahy.Tifrunner.gnm1.ann1.HDCN36 Arachis hypogaea HOM05D007293 ORTHO05D009143 3.8e-06 55.1 102 45.1
ATR0730G001 Amborella trichopoda HOM05D007293 ORTHO05D009143 5.0e-06 54.7 102 44.1
COL.COLO4_37166 Corchorus olitorius HOM05D006762 ORTHO05D003505 6.6e-06 54.3 103 41.7
Duzib187G0523 Durio zibethinus HOM05D007491 ORTHO05D009489 6.6e-06 54.3 97 41.2
QL03p061237 Quercus lobata HOM05D007293 ORTHO05D009143 8.6e-06 53.9 108 42.6


User provided reference genes

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