Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H00106 Erythranthe guttata HOM05D005169 ORTHO05D006436 4.7e-84 314.7 183 100.0
Migut.K01374 Erythranthe guttata HOM05D005169 ORTHO05D006436 5.8e-34 148.3 146 58.9
SGA_v2.0_scaffold30G12455 Striga asiatica HOM05D005169 ORTHO05D006436 8.7e-30 134.4 152 56.6
MSTRG.3296 Avicennia marina HOM05D005169 ORTHO05D006436 1.1e-29 134.0 138 55.1
Dinv33480 Davidia involucrata HOM05D005169 ORTHO05D006436 2.1e-28 129.8 146 51.4
Dinv35078 Davidia involucrata HOM05D005169 ORTHO05D006436 3.1e-27 125.9 143 51.0
Cfa007415 Carpinus fangiana HOM05D005169 ORTHO05D006436 4.0e-27 125.6 152 48.0
SalBow7G2461 Salvia bowleyana HOM05D005169 ORTHO05D006436 6.9e-27 124.8 142 52.1
CsaV3_5G027330 Cucumis sativus L. HOM05D005169 ORTHO05D005030 1.5e-26 123.6 132 50.8
Actinidia36094 Actinidia chinensis HOM05D005169 ORTHO05D006436 2.0e-26 123.2 142 52.1
Lju41C36T6 Lonicera japonica HOM05D005169 ORTHO05D006436 2.0e-26 123.2 155 47.1
Oeu062928.1 Olea europaea HOM05D005169 ORTHO05D006436 2.6e-26 122.9 150 50.7
QL02p075994 Quercus lobata HOM05D005169 ORTHO05D006436 2.6e-26 122.9 158 48.1
vmacro05837 Vaccinium macrocarpon HOM05D005169 ORTHO05D006436 2.6e-26 122.9 141 48.9
Haze_14687 Corylus avellana HOM05D005169 ORTHO05D006436 3.4e-26 122.5 144 47.2
Oeu014861.1 Olea europaea HOM05D005169 ORTHO05D006436 7.6e-26 121.3 138 51.4
ClCG09G019030 Citrullus lanatus HOM05D005169 ORTHO05D006436 4.9e-25 118.6 132 49.2
MELO3C021551.2 Cucumis melo HOM05D005169 ORTHO05D006436 4.9e-25 118.6 132 50.0
MD17G1033200 Malus domestica HOM05D005169 ORTHO05D006436 6.4e-25 118.2 141 48.2
SGA_v2.0_scaffold135G34886 Striga asiatica HOM05D005169 ORTHO05D006436 6.4e-25 118.2 148 50.7
COL.COLO4_28998 Corchorus olitorius HOM05D005169 ORTHO05D006436 8.4e-25 117.9 150 46.0
Nitab4.5_0002306g0060 Nicotiana tabacum HOM05D005169 ORTHO05D006436 8.4e-25 117.9 145 46.9
Oeu043043.1 Olea europaea HOM05D005169 ORTHO05D006436 8.4e-25 117.9 143 49.0
Nitab4.5_0002416g0060 Nicotiana tabacum HOM05D005169 ORTHO05D006436 1.2e-23 114.0 151 43.7
CiPaw.03G039400 Carya illinoinensis HOM05D005169 ORTHO05D006436 2.1e-23 113.2 135 50.4
Cc07_g02080 Coffea canephora HOM05D005169 ORTHO05D006436 3.5e-23 112.5 157 45.9
Gohir.D11G070900 Gossypium hirsutum HOM05D005169 ORTHO05D006436 4.6e-23 112.1 140 50.7
Gorai.006G030600 Gossypium raimondii HOM05D005169 ORTHO05D006436 4.6e-23 112.1 139 48.9
Gorai.007G076200 Gossypium raimondii HOM05D005169 ORTHO05D006436 4.6e-23 112.1 140 50.7
Peaxi162Scf00700g00522 Petunia axillaris HOM05D005169 ORTHO05D006436 4.6e-23 112.1 149 43.6
TAR629G1679 Trochodendron aralioides HOM05D005169 ORTHO05D006436 4.6e-23 112.1 144 46.5
SHI27192 Sapria himalayana HOM05D005169 ORTHO05D006436 7.9e-23 111.3 133 45.9
HanXRQChr07g0198841 Helianthus annuus HOM05D005169 ORTHO05D006436 1.0e-22 110.9 138 44.9
Gohir.A09G026900 Gossypium hirsutum HOM05D005169 ORTHO05D006436 1.8e-22 110.2 139 46.0
Rhsim10G0020400 Rhododendron simsii HOM05D005169 ORTHO05D006256 1.8e-22 110.2 134 46.3
CANSAT64G1588 Cannabis sativa HOM05D005169 ORTHO05D006436 3.0e-22 109.4 150 44.7
Atru.chr6.2317 Acer truncatum HOM05D005169 ORTHO05D006256 3.9e-22 109.0 150 44.0
CSS0037801 Camellia sinensis var. sinensis HOM05D005169 ORTHO05D006436 5.1e-22 108.6 146 45.2
Peaxi162Scf00129g00124 Petunia axillaris HOM05D005169 ORTHO05D006436 5.1e-22 108.6 150 45.3
Sabra16G0229100 Salix brachista HOM05D005169 ORTHO05D006436 5.1e-22 108.6 138 45.7
Gohir.D09G026600 Gossypium hirsutum HOM05D005169 ORTHO05D006436 1.1e-21 107.5 139 46.8
PGR142G3938 Punica granatum HOM05D005169 ORTHO05D006436 1.1e-21 107.5 148 45.9
Gohir.A11G067000 Gossypium hirsutum HOM05D005169 ORTHO05D006436 1.5e-21 107.1 142 47.9
TAR622G1423 Trochodendron aralioides HOM05D005169 ORTHO05D006436 1.9e-21 106.7 130 50.8
HanXRQChr09g0266101 Helianthus annuus HOM05D005169 ORTHO05D006436 2.5e-21 106.3 129 48.1
Prupe.3G286300 Prunus persica HOM05D005169 ORTHO05D006436 4.3e-21 105.5 138 43.5
Potri.001G349700 Populus trichocarpa HOM05D005169 ORTHO05D006436 5.6e-21 105.1 156 39.7
PSO170G4554 Papaver somniferum HOM05D005169 ORTHO05D006436 7.4e-21 104.8 154 40.9
Thhalv10021959m.g Eutrema salsugineum HOM05D005169 ORTHO05D006436 2.1e-20 103.2 157 39.5
BraA10t44462Z Brassica rapa HOM05D005169 ORTHO05D006436 3.7e-20 102.4 161 38.5
Sed0004184 Sechium edule HOM05D005169 ORTHO05D006436 4.8e-20 102.1 132 44.7
A10p23980 Brassica napus HOM05D005169 ORTHO05D006436 1.1e-19 100.9 161 37.9
Ciclev10016934m.g Citrus clementina HOM05D005169 ORTHO05D006436 1.1e-19 100.9 130 43.8
Nn3g16854 Nelumbo nucifera HOM05D005169 ORTHO05D006436 1.4e-19 100.5 135 47.4
Thecc.04G011300 Theobroma cacao HOM05D005169 ORTHO05D006436 1.4e-19 100.5 155 45.8
BolC9t59083H Brassica oleracea HOM05D005169 ORTHO05D006436 1.8e-19 100.1 162 37.7
Carub.0003s0056 Capsella rubella HOM05D005169 ORTHO05D006436 1.8e-19 100.1 150 40.7
ECA232G1653 Erigeron canadensis HOM05D005169 ORTHO05D006436 1.8e-19 100.1 128 45.3
Lsat_1_v5_gn_2_91781 Lactuca sativa HOM05D005169 ORTHO05D006436 3.1e-19 99.4 132 46.2
Solyc12g062840.1 Solanum lycopersicum HOM05D005169 ORTHO05D006436 5.3e-19 98.6 132 43.9
C09p62450 Brassica napus HOM05D005169 ORTHO05D006436 6.9e-19 98.2 144 41.0
Lsat_1_v5_gn_4_182740 Lactuca sativa HOM05D005169 ORTHO05D006436 6.9e-19 98.2 139 46.0
Manes.15G165700 Manihot esculenta HOM05D005169 ORTHO05D006436 9.0e-19 97.8 156 41.7
CARHR075420 Cardamine hirsuta HOM05D005169 ORTHO05D006436 1.2e-18 97.4 163 38.7
C09p75080 Brassica napus HOM05D005169 ORTHO05D006436 1.5e-18 97.1 164 38.4
BolC5t35156H Brassica oleracea HOM05D005169 ORTHO05D006436 1.5e-18 97.1 164 38.4
BcaC05g30410 Brassica carinata HOM05D005169 ORTHO05D006436 2.0e-18 96.7 164 39.0
THA.LOC104821080 Tarenaya hassleriana HOM05D005169 ORTHO05D006436 2.6e-18 96.3 134 44.0
Hma1.2p1_0858F.1_g229310 Hydrangea macrophylla HOM05D005169 ORTHO05D006436 3.4e-18 95.9 150 38.0
EL10Ac1g00764 Beta vulgaris HOM05D005169 ORTHO05D006436 4.5e-18 95.5 145 42.8
PGSC0003DMG400000520 Solanum tuberosum HOM05D005169 ORTHO05D006436 1.0e-17 94.4 174 37.9
A05p44490 Brassica napus HOM05D005169 ORTHO05D006436 1.3e-17 94.0 167 36.5
BraA05t23207Z Brassica rapa HOM05D005169 ORTHO05D006436 1.3e-17 94.0 167 36.5
TWI56G0416 Tripterygium wilfordii HOM05D005169 ORTHO05D006436 1.3e-17 94.0 145 42.1
AUR62013741 Chenopodium quinoa HOM05D005169 ORTHO05D006436 1.7e-17 93.6 158 39.2
AUR62023410 Chenopodium quinoa HOM05D005169 ORTHO05D006436 1.7e-17 93.6 158 39.2
MBI16_g27097_MAGBIO Magnolia biondii HOM05D005169 ORTHO05D006436 2.9e-17 92.8 133 42.1
Psat1g056720 Pisum sativum HOM05D005169 ORTHO05D006436 2.9e-17 92.8 135 40.7
Solyc02g086760.1 Solanum lycopersicum HOM05D005169 ORTHO05D006436 4.9e-17 92.0 181 35.9
FAN09G4345 Fragaria x ananassa HOM05D005169 ORTHO05D006436 6.5e-17 91.7 145 38.6
PSO144G0121 Papaver somniferum HOM05D005169 ORTHO05D006436 6.5e-17 91.7 171 37.4
Sopen02g031520 Solanum pennellii HOM05D005169 ORTHO05D006436 6.5e-17 91.7 182 35.7
CARHR198620 Cardamine hirsuta HOM05D005169 ORTHO05D006436 8.4e-17 91.3 176 36.9
Lalb_Chr06g0175951 Lupinus albus HOM05D005169 ORTHO05D006436 1.1e-16 90.9 141 40.4
Medtr6g406210 Medicago truncatula HOM05D005169 ORTHO05D006436 1.4e-16 90.5 129 41.9
BcaC05g30449 Brassica carinata HOM05D005169 ORTHO05D006436 1.9e-16 90.1 160 38.1
FAN05G3636 Fragaria x ananassa HOM05D005169 ORTHO05D006436 1.9e-16 90.1 147 38.8
FAN05G4915 Fragaria x ananassa HOM05D005169 ORTHO05D006436 1.9e-16 90.1 129 41.1
Aa31LG5G10650 Aethionema arabicum HOM05D005169 ORTHO05D006436 2.5e-16 89.7 132 40.2
BcaC03g13455 Brassica carinata HOM05D005169 ORTHO05D006436 2.5e-16 89.7 134 41.0
FvH4_6g50860 Fragaria vesca HOM05D005169 ORTHO05D006436 3.2e-16 89.4 152 38.2
Psat1g056600 Pisum sativum HOM05D005169 ORTHO05D006436 3.2e-16 89.4 137 39.4
ATR0730G202 Amborella trichopoda HOM05D005169 ORTHO05D006436 5.5e-16 88.6 138 42.0
RcHm_v2.0_Chr2g0172251 Rosa chinensis HOM05D005169 ORTHO05D006436 1.2e-15 87.4 153 39.2
FAN14G0546 Fragaria x ananassa HOM05D005169 ORTHO05D006436 1.6e-15 87.0 152 37.5
Nitab4.5_0014517g0010 Nicotiana tabacum HOM05D005169 ORTHO05D006436 1.6e-15 87.0 156 39.7
AT3G01516 Arabidopsis thaliana HOM05D005169 ORTHO05D006436 3.5e-15 85.9 167 35.9
PSO017G2305 Papaver somniferum HOM05D005169 ORTHO05D006436 6.0e-15 85.1 159 35.2
TPR.G35382 Trifolium pratense HOM05D005169 ORTHO05D006436 6.0e-15 85.1 119 42.0
Ah.05g173110 Amaranthus hybridus HOM05D005169 ORTHO05D006436 7.9e-15 84.7 168 36.3
Lalb_Chr21g0319501 Lupinus albus HOM05D005169 ORTHO05D006436 3.0e-14 82.8 133 38.3
unitig_899.g15487 Utricularia gibba HOM05D005169 ORTHO05D006436 3.0e-14 82.8 126 39.7
Carub.0006s1286 Capsella rubella HOM05D005169 ORTHO05D006436 3.9e-14 82.4 183 32.2
Sp3g00540 Schrenkiella parvula HOM05D005169 ORTHO05D006436 5.1e-14 82.0 152 35.5
Os01g0638800 Oryza sativa ssp. japonica HOM05D005169 ORTHO05D006436 8.7e-14 81.3 144 37.5
PSO478G0492 Papaver somniferum HOM05D005169 ORTHO05D006436 1.1e-13 80.9 171 33.9
AL3G10640 Arabidopsis lyrata HOM05D005169 ORTHO05D006436 1.5e-13 80.5 162 35.8
DCAR_021693 Daucus carota HOM05D005169 ORTHO05D006436 1.5e-13 80.5 138 40.6
Sopen12g026520 Solanum pennellii HOM05D005169 ORTHO05D006436 7.4e-13 78.2 54 66.7
AL6G25460 Arabidopsis lyrata HOM05D005169 ORTHO05D006436 1.3e-12 77.4 177 32.2
Sp6g29350 Schrenkiella parvula HOM05D005169 ORTHO05D006436 2.8e-12 76.3 178 31.5
Sc16g0007930 Simmondsia chinensis HOM05D005169 ORTHO05D006436 2.8e-12 76.3 138 37.0
DCAR_015051 Daucus carota HOM05D005169 ORTHO05D006436 3.7e-12 75.9 130 35.4
Glyma.05G006400 Glycine max HOM05D005169 ORTHO05D006436 3.7e-12 75.9 140 36.4
Zm00001eb296260 Zea mays HOM05D005169 ORTHO05D006436 1.1e-11 74.3 132 38.6
BcaNung03104 Brassica carinata HOM05D005169 ORTHO05D006436 4.1e-11 72.4 161 32.9
Thhalv10014646m.g Eutrema salsugineum HOM05D005169 ORTHO05D006436 4.1e-11 72.4 179 29.6
HPP92_008039 Vanilla planifolia HOM05D005169 ORTHO05D006436 4.1e-11 72.4 129 40.3
Glyma.19G006800 Glycine max HOM05D005169 ORTHO05D006436 6.9e-11 71.6 127 38.6
Zm00001eb157680 Zea mays HOM05D005169 ORTHO05D006436 6.9e-11 71.6 134 37.3
Aa31LG11G14770 Aethionema arabicum HOM05D005169 ORTHO05D006436 1.2e-10 70.9 194 29.9
Cpa.g.sc3104.1 Carica papaya HOM05D005169 ORTHO05D006436 4.5e-10 68.9 127 38.6
CDE07G0703 Ceratophyllum demersum HOM05D005169 ORTHO05D006436 7.7e-10 68.2 70 42.9
BraA02t05235Z Brassica rapa HOM05D005169 ORTHO05D006436 2.2e-09 66.6 170 30.0
SEGI_21704 Sequoiadendron giganteum HOM05D005169 ORTHO05D006436 5.0e-09 65.5 135 34.1
TPR.G10806 Trifolium pratense HOM05D005169 ORTHO05D006436 5.0e-09 65.5 53 60.4
AT5G14690 Arabidopsis thaliana HOM05D005169 ORTHO05D006436 2.5e-08 63.2 48 54.2
Ah.03g141220 Amaranthus hybridus HOM05D005169 ORTHO05D006436 3.2e-08 62.8 84 42.9
Duzib147G0144 Durio zibethinus HOM05D005169 ORTHO05D006436 1.2e-07 60.8 118 35.6
MD09G1031300 Malus domestica HOM05D005169 ORTHO05D006436 2.1e-07 60.1 100 42.0
C02p07220 Brassica napus HOM05D005169 ORTHO05D006436 6.1e-07 58.5 65 46.2
BolC2t06654H Brassica oleracea HOM05D005169 ORTHO05D006436 6.1e-07 58.5 65 46.2
SEGI_19138 Sequoiadendron giganteum HOM05D005169 ORTHO05D006436 6.7e-06 55.1 130 32.3
HPP92_024720 Vanilla planifolia HOM05D005169 ORTHO05D006436 8.8e-06 54.7 45 53.3


User provided reference genes

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