Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G01343 Erythranthe guttata HOM05D007981 ORTHO05D001345 7.6e-178 627.1 327 100.0
Migut.G01335 Erythranthe guttata HOM05D007981 ORTHO05D001345 3.5e-146 521.9 318 89.9
Migut.G01129 Erythranthe guttata HOM05D007981 ORTHO05D001345 2.9e-145 518.8 324 87.0
Migut.G01306 Erythranthe guttata HOM05D007981 ORTHO05D001345 1.4e-142 510.0 333 82.9
Migut.G01327 Erythranthe guttata HOM05D007981 ORTHO05D001345 2.2e-140 502.7 335 81.8
Migut.A01091 Erythranthe guttata HOM05D007981 ORTHO05D001345 2.0e-138 496.1 326 83.1
Migut.G01332 Erythranthe guttata HOM05D007981 ORTHO05D001345 8.8e-134 480.7 309 85.4
Migut.G01304 Erythranthe guttata HOM05D007981 ORTHO05D001345 9.8e-117 424.1 324 75.3
Migut.G01299 Erythranthe guttata HOM05D007981 ORTHO05D001345 9.0e-86 321.2 395 54.7
Oeu022685.1 Olea europaea HOM05D007981 ORTHO05D001345 1.6e-66 257.3 368 50.0
SalBow2G2157 Salvia bowleyana HOM05D007981 ORTHO05D001345 7.2e-51 205.3 346 46.2
GSVIVG01031362001 Vitis vinifera HOM05D007981 ORTHO05D001345 6.1e-50 202.2 361 42.4
Hma1.2p1_0662F.1_g198260 Hydrangea macrophylla HOM05D007981 ORTHO05D001345 2.0e-48 197.2 373 42.1
ECA246G2938 Erigeron canadensis HOM05D007981 ORTHO05D001345 4.8e-47 192.6 375 42.7
Cc09_g04330 Coffea canephora HOM05D007981 ORTHO05D001345 1.2e-45 188.0 375 42.9
TAR633G1356 Trochodendron aralioides HOM05D007981 ORTHO05D001345 1.7e-44 184.1 356 40.2
Lsat_1_v5_gn_3_25100 Lactuca sativa HOM05D007981 ORTHO05D001345 8.5e-44 181.8 357 42.0
Thecc.09G196000 Theobroma cacao HOM05D007981 ORTHO05D001345 9.4e-43 178.3 351 43.6
PGSC0003DMG400042123 Solanum tuberosum HOM05D007981 ORTHO05D001345 6.7e-41 172.2 387 38.5
Manes.12G000800 Manihot esculenta HOM05D007981 ORTHO05D001345 2.0e-40 170.6 372 39.0
MBI07_g42070_MAGBIO Magnolia biondii HOM05D007981 ORTHO05D001345 1.7e-39 167.5 364 39.6
Ciclev10017970m.g Citrus clementina HOM05D007981 ORTHO05D001345 8.2e-39 165.2 361 39.6
Actinidia19656 Actinidia chinensis HOM05D007981 ORTHO05D001345 3.5e-37 159.8 404 37.1
Peaxi162Scf00344g00031 Petunia axillaris HOM05D007981 ORTHO05D001345 5.9e-37 159.1 393 37.9
CSS0007963 Camellia sinensis var. sinensis HOM05D007981 ORTHO05D001345 1.0e-36 158.3 381 37.8
CAN.G691.25 Capsicum annuum HOM05D007981 ORTHO05D001345 1.7e-36 157.5 376 37.0
TAR636G1519 Trochodendron aralioides HOM05D007981 ORTHO05D001345 2.2e-36 157.1 358 37.4
SalBow1G7719 Salvia bowleyana HOM05D007981 ORTHO05D001345 3.2e-35 153.3 339 37.8
Rhsim05G0162500 Rhododendron simsii HOM05D007981 ORTHO05D001345 7.2e-35 152.1 415 35.4
SalBow1G1067 Salvia bowleyana HOM05D007981 ORTHO05D001345 8.0e-34 148.7 342 38.0
Solyc11g008840.3 Solanum lycopersicum HOM05D007981 ORTHO05D001345 1.7e-31 141.0 347 37.8
TWI36G0229 Tripterygium wilfordii HOM05D007981 ORTHO05D001345 7.7e-29 132.1 331 39.3
Atru.chr10.126 Acer truncatum HOM05D007981 ORTHO05D001345 1.5e-27 127.9 376 34.8
PGR031G0831 Punica granatum HOM05D007981 ORTHO05D001345 1.9e-27 127.5 348 35.9
Potri.010G177000 Populus trichocarpa HOM05D007981 ORTHO05D001345 5.5e-27 125.9 281 39.1
Gorai.009G001400 Gossypium raimondii HOM05D007981 ORTHO05D001345 7.2e-27 125.6 313 35.8
FvH4_6g00040 Fragaria vesca HOM05D007981 ORTHO05D001345 4.7e-26 122.9 378 33.9
FAN09G0734 Fragaria x ananassa HOM05D007981 ORTHO05D001345 1.2e-24 118.2 378 33.3
Lj2C405T1 Lonicera japonica HOM05D007981 ORTHO05D001345 1.2e-24 118.2 369 35.2
Lj2C407T2 Lonicera japonica HOM05D007981 ORTHO05D001345 1.2e-24 118.2 367 36.2
Gohir.D05G001500 Gossypium hirsutum HOM05D007981 ORTHO05D001345 1.8e-22 110.9 200 38.5
MELO3C005819.2 Cucumis melo HOM05D007981 ORTHO05D001345 4.1e-22 109.8 366 36.1
Gohir.A05G001200 Gossypium hirsutum HOM05D007981 ORTHO05D001345 5.4e-22 109.4 343 31.8
Aqoxy1G01338 Aquilegia oxysepala HOM05D007981 ORTHO05D001345 2.0e-21 107.5 481 27.4
ClCG01G001160 Citrullus lanatus HOM05D007981 ORTHO05D001345 3.5e-21 106.7 347 34.6
Phvul.011G197200 Phaseolus vulgaris HOM05D007981 ORTHO05D001345 3.5e-21 106.7 344 33.7
Lj3g0009424 Lotus japonicus HOM05D007981 ORTHO05D001345 2.2e-20 104.0 355 34.9
Glyma.15G228000 Glycine max HOM05D007981 ORTHO05D001345 6.5e-20 102.4 364 31.6
FAN14G0327 Fragaria x ananassa HOM05D007981 ORTHO05D001345 1.2e-18 98.2 315 33.7
VMungo1127G1819 Vigna mungo HOM05D007981 ORTHO05D001345 1.6e-18 97.8 289 35.6
arahy.Tifrunner.gnm1.ann1.8NJ4D9 Arachis hypogaea HOM05D007981 ORTHO05D001345 3.6e-18 96.7 335 31.3
arahy.Tifrunner.gnm1.ann1.26SKGH Arachis hypogaea HOM05D007981 ORTHO05D001345 1.4e-17 94.7 337 32.0
Prupe.6G365700 Prunus persica HOM05D007981 ORTHO05D001345 2.0e-16 90.9 384 30.2
Dinv03280 Davidia involucrata HOM05D007981 ORTHO05D001345 1.3e-15 88.2 366 30.9
Medtr8g040940 Medicago truncatula HOM05D007981 ORTHO05D001345 2.2e-15 87.4 341 29.0
Os08g0543000 Oryza sativa ssp. japonica HOM05D007981 ORTHO05D001345 4.9e-15 86.3 305 33.8
DCAR_031612 Daucus carota HOM05D007981 ORTHO05D001345 8.3e-15 85.5 386 29.8
Sed0005322 Sechium edule HOM05D007981 ORTHO05D001345 1.4e-14 84.7 346 31.2
Nitab4.5_0001653g0100 Nicotiana tabacum HOM05D007981 ORTHO05D001345 1.8e-14 84.3 354 32.2
Nitab4.5_0012874g0030 Nicotiana tabacum HOM05D007981 ORTHO05D001345 3.1e-14 83.6 330 32.4
COL.COLO4_23424 Corchorus olitorius HOM05D007981 ORTHO05D001345 7.0e-14 82.4 304 33.9
Sopen11g004620 Solanum pennellii HOM05D007981 ORTHO05D001345 5.9e-13 79.3 141 44.7
Psat4g190600 Pisum sativum HOM05D007981 ORTHO05D001345 1.0e-12 78.6 366 29.5
ATR0743G259 Amborella trichopoda HOM05D001930 ORTHO05D001345 3.3e-11 73.6 120 42.5
CsaV3_5G001280 Cucumis sativus L. HOM05D007981 ORTHO05D001345 7.2e-11 72.4 247 35.2
PSO357G0025 Papaver somniferum HOM05D034346 ORTHO05D001345 9.5e-11 72.0 403 27.0
HPP92_001255 Vanilla planifolia HOM05D007981 ORTHO05D001345 2.3e-09 67.4 142 35.9
SEGI_29321 Sequoiadendron giganteum HOM05D001930 ORTHO05D001345 5.2e-09 66.2 149 35.6
Sabra10G0136000 Salix brachista HOM05D007981 ORTHO05D001345 9.8e-08 62.0 151 37.1
Nn2g13688 Nelumbo nucifera HOM05D001930 ORTHO05D001345 2.9e-07 60.5 455 25.3
PSO801G0843 Papaver somniferum HOM05D001930 ORTHO05D001345 3.7e-07 60.1 176 31.8
Zm00001eb037390 Zea mays HOM05D007981 ORTHO05D001345 3.7e-07 60.1 167 31.1
MBI07_g10349_MAGBIO Magnolia biondii HOM05D001930 ORTHO05D001345 4.9e-07 59.7 81 44.4
Actinidia13930 Actinidia chinensis HOM05D001930 ORTHO05D001345 3.2e-06 57.0 408 25.5
PSO339G3119 Papaver somniferum HOM05D001930 ORTHO05D001345 4.1e-06 56.6 176 30.7
Duzib093G2086 Durio zibethinus HOM05D001930 ORTHO05D001345 5.4e-06 56.2 396 26.3
Gohir.D04G129700 Gossypium hirsutum HOM05D001930 ORTHO05D001345 5.4e-06 56.2 152 34.2
Lalb_Chr10g0105111 Lupinus albus HOM05D001930 ORTHO05D001345 5.4e-06 56.2 199 30.7
GSVIVG01032844001 Vitis vinifera HOM05D001930 ORTHO05D001345 5.4e-06 56.2 453 25.4
COL.COLO4_14547 Corchorus olitorius HOM05D001930 ORTHO05D001345 7.0e-06 55.8 153 36.6


User provided reference genes

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