Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G01326 Erythranthe guttata HOM05D001295 ORTHO05D005319 1.2e-177 626.3 298 100.0
Migut.G01307 Erythranthe guttata HOM05D001295 ORTHO05D005319 2.2e-155 552.4 312 87.2
Migut.G01305 Erythranthe guttata HOM05D001295 ORTHO05D005319 4.4e-124 448.4 313 75.4
SalBow8G2942 Salvia bowleyana HOM05D001295 ORTHO05D005319 3.9e-112 408.7 321 64.8
Oeu020777.1 Olea europaea HOM05D001295 ORTHO05D005319 6.2e-110 401.4 312 62.8
Cc03_g12290 Coffea canephora HOM05D001295 ORTHO05D005319 1.3e-104 383.6 313 62.6
Prupe.1G199500 Prunus persica HOM05D001295 ORTHO05D005319 6.6e-104 381.3 314 58.9
GSVIVG01004102001 Vitis vinifera HOM05D001295 ORTHO05D005319 4.0e-101 372.1 312 58.3
Peaxi162Scf00180g00045 Petunia axillaris HOM05D001295 ORTHO05D005319 4.5e-100 368.6 312 58.0
CSS0006680 Camellia sinensis var. sinensis HOM05D001295 ORTHO05D005319 2.4e-98 362.8 295 60.3
Nn1g09559 Nelumbo nucifera HOM05D001295 ORTHO05D005319 2.4e-98 362.8 303 58.4
CSS0045865 Camellia sinensis var. sinensis HOM05D001295 ORTHO05D005319 3.2e-98 362.5 295 60.0
TAR633G1947 Trochodendron aralioides HOM05D001295 ORTHO05D005319 5.5e-98 361.7 311 57.6
CAN.G65.159 Capsicum annuum HOM05D001295 ORTHO05D005319 2.7e-97 359.4 312 56.4
PGSC0003DMG400026920 Solanum tuberosum HOM05D001295 ORTHO05D005319 3.9e-96 355.5 312 57.7
Sopen06g029480 Solanum pennellii HOM05D001295 ORTHO05D005319 1.1e-95 354.0 300 59.0
Nitab4.5_0001586g0250 Nicotiana tabacum HOM05D001295 ORTHO05D005319 1.9e-95 353.2 330 53.6
Solyc06g073130.4 Solanum lycopersicum HOM05D001295 ORTHO05D005319 1.6e-94 350.1 320 56.2
CiPaw.01G095500 Carya illinoinensis HOM05D001295 ORTHO05D005319 6.9e-93 344.7 299 57.9
MD04G1046100 Malus domestica HOM05D001295 ORTHO05D005319 1.5e-92 343.6 312 56.4
PSO837G0039 Papaver somniferum HOM05D001295 ORTHO05D005319 1.5e-92 343.6 311 54.7
HanXRQChr13g0419451 Helianthus annuus HOM05D001295 ORTHO05D005319 5.8e-92 341.7 311 55.3
DCAR_028425 Daucus carota HOM05D001295 ORTHO05D005319 3.8e-91 339.0 288 59.0
Atru.chr4.1272 Acer truncatum HOM05D001295 ORTHO05D005319 1.1e-90 337.4 314 53.8
Thecc.04G173300 Theobroma cacao HOM05D001295 ORTHO05D005319 1.4e-90 337.0 312 54.2
Lsat_1_v5_gn_3_110661 Lactuca sativa HOM05D001295 ORTHO05D005319 2.5e-90 336.3 312 52.9
VMungo1080G0958 Vigna mungo HOM05D001295 ORTHO05D005319 3.2e-90 335.9 313 55.0
Psat5g290520 Pisum sativum HOM05D001295 ORTHO05D005319 5.5e-90 335.1 294 56.5
Gorai.005G126300 Gossypium raimondii HOM05D001295 ORTHO05D005319 7.1e-90 334.7 290 56.6
TPR.G6512 Trifolium pratense HOM05D001295 ORTHO05D005319 1.2e-89 334.0 294 56.5
Potri.007G132100 Populus trichocarpa HOM05D001295 ORTHO05D005319 2.7e-89 332.8 312 52.2
PGR142G2463 Punica granatum HOM05D001295 ORTHO05D005319 6.0e-89 331.6 312 53.5
Nitab4.5_0002553g0060 Nicotiana tabacum HOM05D001295 ORTHO05D005319 1.3e-88 330.5 360 49.2
COL.COLO4_09274 Corchorus olitorius HOM05D001295 ORTHO05D005319 1.8e-88 330.1 288 55.2
Glyma.15G028500 Glycine max HOM05D001295 ORTHO05D005319 2.3e-88 329.7 294 56.5
Medtr2g099125 Medicago truncatula HOM05D001295 ORTHO05D005319 3.9e-88 328.9 294 55.8
Lj3g0016601 Lotus japonicus HOM05D001295 ORTHO05D005319 3.3e-87 325.9 313 53.4
Manes.11G126000 Manihot esculenta HOM05D001295 ORTHO05D005319 4.3e-87 325.5 311 52.4
AUR62002356 Chenopodium quinoa HOM05D001295 ORTHO05D005319 1.6e-86 323.6 367 47.1
Cfa015203 Carpinus fangiana HOM05D001295 ORTHO05D005319 4.1e-85 318.9 286 55.9
Hund12401 Selenicereus undatus HOM05D001295 ORTHO05D005319 2.0e-84 316.6 291 54.6
THA.LOC104803837 Tarenaya hassleriana HOM05D001295 ORTHO05D005319 1.0e-83 314.3 312 49.0
ATR0743G262 Amborella trichopoda HOM05D001295 ORTHO05D005319 3.2e-82 309.3 288 53.1
Gohir.A02G093300 Gossypium hirsutum HOM05D001295 ORTHO05D005319 3.6e-81 305.8 275 54.2
HPP92_007597 Vanilla planifolia HOM05D001295 ORTHO05D005319 6.1e-81 305.1 305 48.5
Ca_01246_v3 Cicer arietinum L. HOM05D001295 ORTHO05D005319 1.6e-78 297.0 276 54.7
Gohir.D02G111400 Gossypium hirsutum HOM05D001295 ORTHO05D005319 2.8e-78 296.2 289 52.2
arahy.Tifrunner.gnm1.ann1.982DXJ Arachis hypogaea HOM05D001295 ORTHO05D005319 3.7e-78 295.8 270 54.8
SGA_v2.0_scaffold12G06175 Striga asiatica HOM05D001295 ORTHO05D005319 1.8e-77 293.5 281 54.8
Thhalv10001762m.g Eutrema salsugineum HOM05D001295 ORTHO05D005319 1.5e-76 290.4 313 45.4
Sc21g0002910 Simmondsia chinensis HOM05D001295 ORTHO05D005319 2.0e-76 290.0 311 48.9
Sed0017723 Sechium edule HOM05D001295 ORTHO05D005319 4.5e-76 288.9 309 47.2
AL4G42200 Arabidopsis lyrata HOM05D001295 ORTHO05D005319 7.7e-76 288.1 313 46.3
Carub.0004s2592 Capsella rubella HOM05D001295 ORTHO05D005319 1.3e-75 287.3 313 45.7
Aa31LG1G25200 Aethionema arabicum HOM05D001295 ORTHO05D005319 3.8e-75 285.8 291 48.1
BraA05t19365Z Brassica rapa HOM05D001295 ORTHO05D005319 3.2e-74 282.7 314 45.2
Duzib212G0222 Durio zibethinus HOM05D001295 ORTHO05D005319 2.7e-73 279.6 304 50.3
RhsimUnG0137700 Rhododendron simsii HOM05D001295 ORTHO05D005319 1.0e-72 277.7 284 51.8
AUR62023829 Chenopodium quinoa HOM05D001295 ORTHO05D005319 9.7e-71 271.2 299 49.2
MSTRG.4291 Avicennia marina HOM05D001295 ORTHO05D005319 1.7e-70 270.4 206 68.0
EL10Ac3g06020 Beta vulgaris HOM05D001295 ORTHO05D005319 4.1e-69 265.8 333 44.7
Sp4g25550 Schrenkiella parvula HOM05D001295 ORTHO05D005319 4.5e-68 262.3 293 44.7
QL10p051312 Quercus lobata HOM05D001295 ORTHO05D005319 5.9e-68 261.9 411 39.2
Rhsim09G0020700 Rhododendron simsii HOM05D001295 ORTHO05D005319 1.7e-67 260.4 384 41.7
ClCG06G001010 Citrullus lanatus HOM05D001295 ORTHO05D005319 1.6e-65 253.8 310 41.9
BcaC02g12392 Brassica carinata HOM05D001295 ORTHO05D005319 1.0e-64 251.1 295 44.4
C04p04470 Brassica napus HOM05D001295 ORTHO05D005319 1.0e-64 251.1 295 44.4
BolC4t22080H Brassica oleracea HOM05D001295 ORTHO05D005319 1.8e-64 250.4 295 44.1
Mapoly0209s0009 Marchantia polymorpha HOM05D001295 ORTHO05D005319 8.8e-64 248.1 287 46.0
arahy.Tifrunner.gnm1.ann1.CA0DYB Arachis hypogaea HOM05D001295 ORTHO05D005319 1.1e-63 247.7 300 45.3
arahy.Tifrunner.gnm1.ann1.1HI5HP Arachis hypogaea HOM05D001295 ORTHO05D005319 2.6e-63 246.5 296 46.3
AagrBONN_evm.TU.Sc2ySwM_228.190 Anthoceros agrestis HOM05D001295 ORTHO05D005319 3.3e-63 246.1 296 44.6
A05p03770 Brassica napus HOM05D001295 ORTHO05D005319 3.3e-63 246.1 294 42.9
BcaB02g08938 Brassica carinata HOM05D001295 ORTHO05D005319 1.7e-62 243.8 295 41.4
unitig_37.g12026 Utricularia gibba HOM05D001295 ORTHO05D005319 1.7e-62 243.8 215 56.3
vmacro00676 Vaccinium macrocarpon HOM05D001295 ORTHO05D005319 1.7e-62 243.8 211 59.7
Migut.G01331 Erythranthe guttata HOM05D001295 ORTHO05D005319 4.5e-60 235.7 133 87.2
SMO337G0100 Selaginella moellendorffii HOM05D001295 ORTHO05D005319 6.5e-59 231.9 265 48.3
Phvul.005G154600 Phaseolus vulgaris HOM05D001295 ORTHO05D005319 1.7e-54 217.2 241 50.6
Actinidia34573 Actinidia chinensis HOM05D001295 ORTHO05D005319 6.3e-54 215.3 193 61.1
Dinv05087 Davidia involucrata HOM05D001295 ORTHO05D005319 1.8e-53 213.8 210 54.8
Sabra07G0119100 Salix brachista HOM05D001295 ORTHO05D005319 4.2e-50 202.6 287 39.7
PSO017G5265 Papaver somniferum HOM05D001295 ORTHO05D005319 9.4e-50 201.4 208 50.0
ECA240G1882 Erigeron canadensis HOM05D001295 ORTHO05D005319 1.4e-48 197.6 190 53.7
MELO3C022439.2 Cucumis melo HOM05D001295 ORTHO05D005319 5.2e-48 195.7 309 35.0
Aqoxy5G00377 Aquilegia oxysepala HOM05D001295 ORTHO05D005319 3.4e-47 193.0 205 49.3
QL10p051666 Quercus lobata HOM05D001295 ORTHO05D005319 4.4e-47 192.6 193 54.4
AT3G03320 Arabidopsis thaliana HOM05D001295 ORTHO05D005319 5.7e-47 192.2 147 66.0
Eucgr.H00340 Eucalyptus grandis HOM05D001295 ORTHO05D005319 7.5e-47 191.8 210 52.4
AL3G12950 Arabidopsis lyrata HOM05D001295 ORTHO05D005319 1.1e-45 188.0 130 70.0
COL.COLO4_21796 Corchorus olitorius HOM05D001295 ORTHO05D005319 1.1e-45 188.0 129 68.2
Gohir.D08G098300 Gossypium hirsutum HOM05D001295 ORTHO05D005319 1.8e-45 187.2 129 65.9
Ciclev10021666m.g Citrus clementina HOM05D001295 ORTHO05D005319 3.1e-45 186.4 137 63.5
Gorai.004G105900 Gossypium raimondii HOM05D001295 ORTHO05D005319 4.1e-45 186.0 129 65.1
Lalb_Chr14g0372571 Lupinus albus HOM05D001295 ORTHO05D005319 5.4e-45 185.7 193 49.2
TWI15G0408 Tripterygium wilfordii HOM05D001295 ORTHO05D005319 2.0e-44 183.7 130 63.8
Carub.0003s0249 Capsella rubella HOM05D001295 ORTHO05D005319 3.5e-44 183.0 130 67.7
Lj3C135G1 Lonicera japonica HOM05D001295 ORTHO05D005319 4.5e-44 182.6 167 54.5
Sp3g02350 Schrenkiella parvula HOM05D001295 ORTHO05D005319 1.3e-43 181.0 130 66.2
Thhalv10021391m.g Eutrema salsugineum HOM05D001295 ORTHO05D005319 1.7e-43 180.6 130 65.4
BraA05t23124Z Brassica rapa HOM05D001295 ORTHO05D005319 3.8e-43 179.5 150 58.7
C05p63460 Brassica napus HOM05D001295 ORTHO05D005319 6.5e-43 178.7 150 58.7
Lalb_Chr22g0352051 Lupinus albus HOM05D001295 ORTHO05D005319 1.1e-42 177.9 166 53.0
A05p43870 Brassica napus HOM05D001295 ORTHO05D005319 1.5e-42 177.6 150 58.7
BolC5t35010H Brassica oleracea HOM05D001295 ORTHO05D005319 1.5e-42 177.6 150 58.7
CARHR077360 Cardamine hirsuta HOM05D001295 ORTHO05D005319 1.9e-42 177.2 136 62.5
Sed0000422 Sechium edule HOM05D001295 ORTHO05D005319 1.9e-42 177.2 131 63.4
FAN24G0827 Fragaria x ananassa HOM05D001295 ORTHO05D005319 7.2e-42 175.3 127 63.8
CsaV3_4G002500 Cucumis sativus L. HOM05D001295 ORTHO05D005319 9.5e-42 174.9 128 68.0
BcaC05g30303 Brassica carinata HOM05D001295 ORTHO05D005319 1.2e-41 174.5 140 61.4
Manes.04G047700 Manihot esculenta HOM05D001295 ORTHO05D005319 2.1e-41 173.7 144 56.2
FvH4_2g24830 Fragaria vesca HOM05D001295 ORTHO05D005319 4.7e-41 172.6 127 63.0
FAN15G1214 Fragaria x ananassa HOM05D001295 ORTHO05D005319 6.1e-41 172.2 148 56.1
Sabra07G0107500 Salix brachista HOM05D001295 ORTHO05D005319 1.4e-40 171.0 130 62.3
RcHm_v2.0_Chr6g0292651 Rosa chinensis HOM05D001295 ORTHO05D005319 2.3e-40 170.2 118 67.8
Sabra07G0119300 Salix brachista HOM05D001295 ORTHO05D005319 8.8e-40 168.3 130 61.5
FAN27G1301 Fragaria x ananassa HOM05D001295 ORTHO05D005319 1.2e-39 167.9 127 60.6
Zm00001eb064040 Zea mays HOM05D001295 ORTHO05D005319 1.2e-39 167.9 298 38.6
THA.LOC104820845 Tarenaya hassleriana HOM05D001295 ORTHO05D005319 1.5e-39 167.5 113 70.8
ClCG07G011710 Citrullus lanatus HOM05D001295 ORTHO05D005319 4.4e-39 166.0 130 65.4
Gohir.A08G092500 Gossypium hirsutum HOM05D001295 ORTHO05D005319 8.3e-38 161.8 130 60.0
Aa31LG5G13780 Aethionema arabicum HOM05D001295 ORTHO05D005319 1.4e-37 161.0 149 56.4
CsaV3_6G006850 Cucumis sativus L. HOM05D005724 ORTHO05D006636 1.4e-37 161.0 203 39.4
Thecc.04G173200 Theobroma cacao HOM05D001295 ORTHO05D005319 5.9e-36 155.6 117 64.1
CARHR138550 Cardamine hirsuta HOM05D001295 ORTHO05D005319 5.0e-35 152.5 211 38.4
Ciclev10021418m.g Citrus clementina HOM05D001295 ORTHO05D005319 3.3e-34 149.8 207 40.6
Sabra07G0119200 Salix brachista HOM05D001295 ORTHO05D005319 2.0e-28 130.6 136 47.1
Pp3c13_1370 Physcomitrium patens HOM05D001295 ORTHO05D005319 1.0e-27 128.3 186 41.4
Hma1.2p1_0401F.1_g144800 Hydrangea macrophylla HOM05D001295 ORTHO05D005319 1.6e-25 120.9 129 51.9
AT2G43465 Arabidopsis thaliana HOM05D001295 ORTHO05D005319 1.0e-24 118.2 134 44.8
Cpa.g.sc9.324 Carica papaya HOM05D001295 ORTHO05D005319 1.0e-24 118.2 129 49.6
Haze_01447 Corylus avellana HOM05D001295 ORTHO05D005319 4.4e-23 112.8 72 63.9
C01p44730 Brassica napus HOM05D001295 ORTHO05D005319 1.3e-22 111.3 128 42.2
SalBow5G4879 Salvia bowleyana HOM05D001295 ORTHO05D005319 1.7e-22 110.9 89 64.0
Lalb_Chr14g0372561 Lupinus albus HOM05D001295 ORTHO05D005319 3.7e-22 109.8 64 68.8
Lj3g0015879 Lotus japonicus HOM05D001295 ORTHO05D005319 6.4e-22 109.0 145 46.2
Lj3A83T16 Lonicera japonica HOM05D001295 ORTHO05D005319 1.0e-19 101.7 65 72.3
A09p42860 Brassica napus HOM05D001295 ORTHO05D005319 2.3e-19 100.5 156 36.5
vmacro00675 Vaccinium macrocarpon HOM05D001295 ORTHO05D005319 1.9e-18 97.4 63 69.8
BolC2t06464H Brassica oleracea HOM05D001295 ORTHO05D005319 2.5e-18 97.1 99 47.5
Sabra17G0001700 Salix brachista HOM05D001295 ORTHO05D005319 1.1e-13 81.6 93 43.0
Haze_01445 Corylus avellana HOM05D001295 ORTHO05D005319 3.2e-13 80.1 65 56.9
Cre16.g668650 Chlamydomonas reinhardtii HOM05D001295 ORTHO05D005319 6.6e-11 72.4 126 33.3
Glyma.13G345802 Glycine max HOM05D001295 ORTHO05D005319 3.3e-10 70.1 115 39.1
Medtr2g027210 Medicago truncatula HOM05D001295 ORTHO05D005319 2.1e-09 67.4 83 43.4
CBR_g21778 Chara braunii HOM05D001295 ORTHO05D005319 3.1e-08 63.5 99 41.4
MELO3C001160.2 Cucumis melo HOM05D001295 ORTHO05D005319 6.8e-08 62.4 46 65.2


User provided reference genes

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