Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G01305 Erythranthe guttata HOM05D001295 ORTHO05D005319 9.4e-217 756.5 368 100.0
Migut.G01307 Erythranthe guttata HOM05D001295 ORTHO05D005319 6.1e-192 674.1 399 86.5
SalBow8G2942 Salvia bowleyana HOM05D001295 ORTHO05D005319 3.5e-139 498.8 406 65.3
Oeu020777.1 Olea europaea HOM05D001295 ORTHO05D005319 2.8e-128 462.6 395 60.5
Migut.G01326 Erythranthe guttata HOM05D001295 ORTHO05D005319 7.9e-123 444.5 313 75.4
Cc03_g12290 Coffea canephora HOM05D001295 ORTHO05D005319 6.5e-117 424.9 387 58.1
GSVIVG01004102001 Vitis vinifera HOM05D001295 ORTHO05D005319 1.4e-116 423.7 393 55.2
Peaxi162Scf00180g00045 Petunia axillaris HOM05D001295 ORTHO05D005319 6.7e-114 414.8 391 55.8
TAR633G1947 Trochodendron aralioides HOM05D001295 ORTHO05D005319 5.7e-113 411.8 392 55.4
Sopen06g029480 Solanum pennellii HOM05D001295 ORTHO05D005319 2.5e-108 396.4 393 53.7
PGSC0003DMG400026920 Solanum tuberosum HOM05D001295 ORTHO05D005319 5.5e-108 395.2 395 54.7
CSS0006680 Camellia sinensis var. sinensis HOM05D001295 ORTHO05D005319 1.0e-106 391.0 360 56.4
CSS0045865 Camellia sinensis var. sinensis HOM05D001295 ORTHO05D005319 1.4e-106 390.6 362 56.1
CAN.G65.159 Capsicum annuum HOM05D001295 ORTHO05D005319 6.7e-106 388.3 393 52.4
SGA_v2.0_scaffold12G06175 Striga asiatica HOM05D001295 ORTHO05D005319 6.7e-106 388.3 360 58.9
Solyc06g073130.4 Solanum lycopersicum HOM05D001295 ORTHO05D005319 2.0e-105 386.7 413 51.3
Prupe.1G199500 Prunus persica HOM05D001295 ORTHO05D005319 9.7e-105 384.4 389 51.7
Nitab4.5_0002553g0060 Nicotiana tabacum HOM05D001295 ORTHO05D005319 1.1e-103 380.9 452 47.3
HanXRQChr13g0419451 Helianthus annuus HOM05D001295 ORTHO05D005319 5.9e-102 375.2 389 50.6
Lsat_1_v5_gn_3_110661 Lactuca sativa HOM05D001295 ORTHO05D005319 5.9e-102 375.2 396 50.3
Potri.007G132100 Populus trichocarpa HOM05D001295 ORTHO05D005319 5.5e-100 368.6 389 50.4
DCAR_028425 Daucus carota HOM05D001295 ORTHO05D005319 1.2e-99 367.5 380 51.8
MSTRG.4291 Avicennia marina HOM05D001295 ORTHO05D005319 1.6e-99 367.1 286 68.2
Thecc.04G173300 Theobroma cacao HOM05D001295 ORTHO05D005319 2.1e-99 366.7 383 51.2
CiPaw.01G095500 Carya illinoinensis HOM05D001295 ORTHO05D005319 2.7e-99 366.3 379 52.0
Manes.11G126000 Manihot esculenta HOM05D001295 ORTHO05D005319 6.1e-99 365.2 390 51.3
Atru.chr4.1272 Acer truncatum HOM05D001295 ORTHO05D005319 1.4e-98 364.0 390 50.5
PSO837G0039 Papaver somniferum HOM05D001295 ORTHO05D005319 1.8e-98 363.6 396 48.5
AUR62002356 Chenopodium quinoa HOM05D001295 ORTHO05D005319 6.7e-98 361.7 467 44.8
COL.COLO4_09274 Corchorus olitorius HOM05D001295 ORTHO05D005319 2.8e-96 356.3 383 50.1
Gorai.005G126300 Gossypium raimondii HOM05D001295 ORTHO05D005319 4.5e-94 349.0 386 50.5
VMungo1080G0958 Vigna mungo HOM05D001295 ORTHO05D005319 7.7e-94 348.2 390 48.2
MD04G1046100 Malus domestica HOM05D001295 ORTHO05D005319 3.8e-93 345.9 393 49.4
Nn1g09559 Nelumbo nucifera HOM05D001295 ORTHO05D005319 1.9e-92 343.6 334 52.4
PGR142G2463 Punica granatum HOM05D001295 ORTHO05D005319 7.2e-92 341.7 389 47.8
Hund12401 Selenicereus undatus HOM05D001295 ORTHO05D005319 1.6e-91 340.5 387 48.6
Nitab4.5_0001586g0250 Nicotiana tabacum HOM05D001295 ORTHO05D005319 3.0e-90 336.3 506 41.1
ATR0743G262 Amborella trichopoda HOM05D001295 ORTHO05D005319 3.3e-89 332.8 400 46.0
Lj3g0016601 Lotus japonicus HOM05D001295 ORTHO05D005319 7.5e-89 331.6 391 47.6
HPP92_007597 Vanilla planifolia HOM05D001295 ORTHO05D005319 7.5e-89 331.6 391 44.8
Glyma.15G028500 Glycine max HOM05D001295 ORTHO05D005319 1.3e-88 330.9 389 46.5
Psat5g290520 Pisum sativum HOM05D001295 ORTHO05D005319 2.8e-88 329.7 385 47.0
Medtr2g099125 Medicago truncatula HOM05D001295 ORTHO05D005319 6.3e-88 328.6 381 48.0
TPR.G6512 Trifolium pratense HOM05D001295 ORTHO05D005319 1.1e-87 327.8 399 46.9
Sc21g0002910 Simmondsia chinensis HOM05D001295 ORTHO05D005319 7.7e-86 321.6 396 46.7
THA.LOC104803837 Tarenaya hassleriana HOM05D001295 ORTHO05D005319 2.2e-85 320.1 411 43.6
AUR62023829 Chenopodium quinoa HOM05D001295 ORTHO05D005319 3.8e-85 319.3 396 44.7
Ca_01246_v3 Cicer arietinum L. HOM05D001295 ORTHO05D005319 6.5e-85 318.5 377 46.4
Cfa015203 Carpinus fangiana HOM05D001295 ORTHO05D005319 5.5e-84 315.5 389 45.5
Aa31LG1G25200 Aethionema arabicum HOM05D001295 ORTHO05D005319 1.6e-83 313.9 384 45.3
Migut.G01331 Erythranthe guttata HOM05D001295 ORTHO05D005319 2.7e-83 313.2 175 88.6
Thhalv10001762m.g Eutrema salsugineum HOM05D001295 ORTHO05D005319 2.3e-82 310.1 383 44.6
Gohir.D02G111400 Gossypium hirsutum HOM05D001295 ORTHO05D005319 2.3e-82 310.1 384 46.9
Sed0017723 Sechium edule HOM05D001295 ORTHO05D005319 2.3e-82 310.1 384 43.0
Actinidia34573 Actinidia chinensis HOM05D001295 ORTHO05D005319 4.4e-81 305.8 299 57.9
arahy.Tifrunner.gnm1.ann1.982DXJ Arachis hypogaea HOM05D001295 ORTHO05D005319 5.7e-81 305.4 361 47.1
Dinv05087 Davidia involucrata HOM05D001295 ORTHO05D005319 1.1e-79 301.2 297 55.9
Duzib212G0222 Durio zibethinus HOM05D001295 ORTHO05D005319 4.5e-78 295.8 412 43.7
EL10Ac3g06020 Beta vulgaris HOM05D001295 ORTHO05D005319 5.9e-78 295.4 412 43.0
AL4G42200 Arabidopsis lyrata HOM05D001295 ORTHO05D005319 1.5e-76 290.8 390 42.8
Gohir.A02G093300 Gossypium hirsutum HOM05D001295 ORTHO05D005319 1.9e-76 290.4 385 43.6
Carub.0004s2592 Capsella rubella HOM05D001295 ORTHO05D005319 3.3e-76 289.7 395 42.3
BraA05t19365Z Brassica rapa HOM05D001295 ORTHO05D005319 1.6e-75 287.3 390 42.1
QL10p051312 Quercus lobata HOM05D001295 ORTHO05D005319 6.8e-74 282.0 487 37.0
Rhsim09G0020700 Rhododendron simsii HOM05D001295 ORTHO05D005319 3.4e-73 279.6 424 40.3
Sp4g25550 Schrenkiella parvula HOM05D001295 ORTHO05D005319 3.4e-73 279.6 362 43.4
ClCG06G001010 Citrullus lanatus HOM05D001295 ORTHO05D005319 4.1e-71 272.7 388 39.4
arahy.Tifrunner.gnm1.ann1.CA0DYB Arachis hypogaea HOM05D001295 ORTHO05D005319 2.9e-69 266.5 376 41.8
arahy.Tifrunner.gnm1.ann1.1HI5HP Arachis hypogaea HOM05D001295 ORTHO05D005319 8.6e-69 265.0 376 42.0
BcaC02g12392 Brassica carinata HOM05D001295 ORTHO05D005319 7.3e-68 261.9 364 42.3
C04p04470 Brassica napus HOM05D001295 ORTHO05D005319 7.3e-68 261.9 364 42.3
BcaB02g08938 Brassica carinata HOM05D001295 ORTHO05D005319 3.6e-67 259.6 364 40.4
BolC4t22080H Brassica oleracea HOM05D001295 ORTHO05D005319 3.6e-67 259.6 364 42.0
A05p03770 Brassica napus HOM05D001295 ORTHO05D005319 1.8e-66 257.3 362 41.2
RhsimUnG0137700 Rhododendron simsii HOM05D001295 ORTHO05D005319 1.2e-65 254.6 284 48.2
Aqoxy5G00377 Aquilegia oxysepala HOM05D001295 ORTHO05D005319 2.9e-64 250.0 290 48.6
Eucgr.H00340 Eucalyptus grandis HOM05D001295 ORTHO05D005319 1.4e-63 247.7 301 47.2
MELO3C022439.2 Cucumis melo HOM05D001295 ORTHO05D005319 4.1e-63 246.1 382 37.2
PSO017G5265 Papaver somniferum HOM05D001295 ORTHO05D005319 2.0e-62 243.8 293 45.4
Phvul.005G154600 Phaseolus vulgaris HOM05D001295 ORTHO05D005319 2.5e-60 236.9 302 44.7
Mapoly0209s0009 Marchantia polymorpha HOM05D001295 ORTHO05D005319 2.1e-59 233.8 402 38.6
unitig_37.g12026 Utricularia gibba HOM05D001295 ORTHO05D005319 6.2e-59 232.3 184 61.4
TWI15G0408 Tripterygium wilfordii HOM05D001295 ORTHO05D005319 1.1e-58 231.5 276 46.7
QL10p051666 Quercus lobata HOM05D001295 ORTHO05D005319 1.8e-58 230.7 269 48.0
COL.COLO4_21796 Corchorus olitorius HOM05D001295 ORTHO05D005319 3.7e-56 223.0 265 46.4
vmacro00676 Vaccinium macrocarpon HOM05D001295 ORTHO05D005319 7.0e-55 218.8 211 54.0
Lalb_Chr14g0372571 Lupinus albus HOM05D001295 ORTHO05D005319 1.2e-54 218.0 279 42.3
Sabra07G0107500 Salix brachista HOM05D001295 ORTHO05D005319 1.2e-54 218.0 267 47.2
Ciclev10021666m.g Citrus clementina HOM05D001295 ORTHO05D005319 1.3e-53 214.5 274 45.3
AagrBONN_evm.TU.Sc2ySwM_228.190 Anthoceros agrestis HOM05D001295 ORTHO05D005319 2.3e-53 213.8 436 34.6
SalBow5G4879 Salvia bowleyana HOM05D001295 ORTHO05D005319 2.5e-52 210.3 171 65.5
Gohir.D08G098300 Gossypium hirsutum HOM05D001295 ORTHO05D005319 2.3e-50 203.8 247 44.1
Gorai.004G105900 Gossypium raimondii HOM05D001295 ORTHO05D005319 5.2e-50 202.6 247 43.7
Sabra07G0119100 Salix brachista HOM05D001295 ORTHO05D005319 8.9e-50 201.8 358 36.0
Sabra07G0119300 Salix brachista HOM05D001295 ORTHO05D005319 2.6e-49 200.3 255 45.9
Sed0000422 Sechium edule HOM05D001295 ORTHO05D005319 5.8e-49 199.1 260 46.2
CsaV3_6G006850 Cucumis sativus L. HOM05D005724 ORTHO05D006636 3.7e-48 196.4 283 37.8
Lalb_Chr22g0352051 Lupinus albus HOM05D001295 ORTHO05D005319 3.2e-47 193.4 263 40.3
FAN27G1301 Fragaria x ananassa HOM05D001295 ORTHO05D005319 3.5e-46 189.9 249 45.0
FvH4_2g24830 Fragaria vesca HOM05D001295 ORTHO05D005319 4.6e-46 189.5 249 44.6
RcHm_v2.0_Chr6g0292651 Rosa chinensis HOM05D001295 ORTHO05D005319 7.8e-46 188.7 249 45.4
SMO337G0100 Selaginella moellendorffii HOM05D001295 ORTHO05D005319 1.0e-45 188.3 270 44.1
ECA240G1882 Erigeron canadensis HOM05D001295 ORTHO05D005319 1.3e-45 188.0 191 49.2
FAN24G0827 Fragaria x ananassa HOM05D001295 ORTHO05D005319 1.3e-45 188.0 249 44.6
Zm00001eb064040 Zea mays HOM05D001295 ORTHO05D005319 3.0e-45 186.8 384 33.9
Lj3C135G1 Lonicera japonica HOM05D001295 ORTHO05D005319 8.6e-45 185.3 184 52.2
Thecc.04G173200 Theobroma cacao HOM05D001295 ORTHO05D005319 8.6e-45 185.3 190 52.6
CsaV3_4G002500 Cucumis sativus L. HOM05D001295 ORTHO05D005319 2.1e-43 180.6 245 46.1
ClCG07G011710 Citrullus lanatus HOM05D001295 ORTHO05D005319 6.2e-43 179.1 247 46.2
AL3G12950 Arabidopsis lyrata HOM05D001295 ORTHO05D005319 8.1e-43 178.7 263 40.3
CARHR077360 Cardamine hirsuta HOM05D001295 ORTHO05D005319 2.4e-42 177.2 261 42.5
Manes.04G047700 Manihot esculenta HOM05D001295 ORTHO05D005319 2.4e-42 177.2 254 41.3
AT3G03320 Arabidopsis thaliana HOM05D001295 ORTHO05D005319 3.1e-42 176.8 258 41.5
CARHR138550 Cardamine hirsuta HOM05D001295 ORTHO05D005319 1.5e-41 174.5 290 37.6
Gohir.A08G092500 Gossypium hirsutum HOM05D001295 ORTHO05D005319 1.5e-41 174.5 249 40.2
Thhalv10021391m.g Eutrema salsugineum HOM05D001295 ORTHO05D005319 9.9e-41 171.8 266 41.0
FAN15G1214 Fragaria x ananassa HOM05D001295 ORTHO05D005319 1.3e-40 171.4 249 41.0
Carub.0003s0249 Capsella rubella HOM05D001295 ORTHO05D005319 2.9e-40 170.2 261 40.6
vmacro00675 Vaccinium macrocarpon HOM05D001295 ORTHO05D005319 2.9e-40 170.2 179 52.0
BcaC05g30303 Brassica carinata HOM05D001295 ORTHO05D005319 4.9e-40 169.5 262 42.0
THA.LOC104820845 Tarenaya hassleriana HOM05D001295 ORTHO05D005319 1.4e-39 167.9 264 41.3
A05p43870 Brassica napus HOM05D001295 ORTHO05D005319 2.4e-39 167.2 273 38.1
BraA05t23124Z Brassica rapa HOM05D001295 ORTHO05D005319 2.4e-39 167.2 273 38.1
Sp3g02350 Schrenkiella parvula HOM05D001295 ORTHO05D005319 1.2e-38 164.9 266 40.2
C05p63460 Brassica napus HOM05D001295 ORTHO05D005319 2.1e-38 164.1 271 38.7
BolC5t35010H Brassica oleracea HOM05D001295 ORTHO05D005319 2.3e-37 160.6 271 38.0
Ciclev10021418m.g Citrus clementina HOM05D001295 ORTHO05D005319 4.7e-35 152.9 298 35.6
Sabra07G0119200 Salix brachista HOM05D001295 ORTHO05D005319 4.4e-33 146.4 189 43.4
Haze_01445 Corylus avellana HOM05D001295 ORTHO05D005319 7.6e-33 145.6 154 50.6
Aa31LG5G13780 Aethionema arabicum HOM05D001295 ORTHO05D005319 1.4e-31 141.4 279 36.2
Pp3c13_1370 Physcomitrium patens HOM05D001295 ORTHO05D005319 3.3e-28 130.2 318 31.1
AT2G43465 Arabidopsis thaliana HOM05D001295 ORTHO05D005319 5.3e-26 122.9 187 38.5
C01p44730 Brassica napus HOM05D001295 ORTHO05D005319 9.0e-26 122.1 284 31.0
Cpa.g.sc9.324 Carica papaya HOM05D001295 ORTHO05D005319 2.2e-24 117.5 104 55.8
Hma1.2p1_0401F.1_g144800 Hydrangea macrophylla HOM05D001295 ORTHO05D005319 7.1e-23 112.5 85 67.1
Haze_01447 Corylus avellana HOM05D001295 ORTHO05D005319 1.2e-22 111.7 70 64.3
Lalb_Chr14g0372561 Lupinus albus HOM05D001295 ORTHO05D005319 7.9e-22 109.0 64 68.8
A09p42860 Brassica napus HOM05D001295 ORTHO05D005319 8.1e-19 99.0 216 33.8
Sabra17G0001700 Salix brachista HOM05D001295 ORTHO05D005319 1.9e-15 87.8 104 45.2
Lj3g0015879 Lotus japonicus HOM05D001295 ORTHO05D005319 4.2e-15 86.7 141 41.8
BolC2t06464H Brassica oleracea HOM05D001295 ORTHO05D005319 9.3e-15 85.5 263 27.0
Lj3A83T16 Lonicera japonica HOM05D001295 ORTHO05D005319 5.3e-10 69.7 44 68.2
Glyma.13G345802 Glycine max HOM05D001295 ORTHO05D005319 9.0e-10 68.9 109 41.3
Cre16.g668650 Chlamydomonas reinhardtii HOM05D001295 ORTHO05D005319 8.4e-08 62.4 120 34.2
Sabra17G0001500 Salix brachista HOM05D001295 ORTHO05D005319 1.1e-07 62.0 79 43.0
Sabra17G0000500 Salix brachista HOM05D001295 ORTHO05D005319 4.2e-07 60.1 79 41.8
Sabra17G0015200 Salix brachista HOM05D001295 ORTHO05D005319 2.1e-06 57.8 94 37.2


User provided reference genes

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