Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G01299 Erythranthe guttata HOM05D007981 ORTHO05D001345 1.5e-242 842.4 434 100.0
Migut.A01091 Erythranthe guttata HOM05D007981 ORTHO05D001345 1.6e-98 364.0 415 56.9
Migut.G01306 Erythranthe guttata HOM05D007981 ORTHO05D001345 5.1e-97 359.0 403 58.8
Migut.G01327 Erythranthe guttata HOM05D007981 ORTHO05D001345 2.2e-95 353.6 402 58.7
Migut.G01304 Erythranthe guttata HOM05D007981 ORTHO05D001345 1.5e-91 340.9 402 56.0
Migut.G01332 Erythranthe guttata HOM05D007981 ORTHO05D001345 4.7e-90 335.9 380 57.9
Migut.G01129 Erythranthe guttata HOM05D007981 ORTHO05D001345 1.1e-86 324.7 396 55.6
Migut.G01343 Erythranthe guttata HOM05D007981 ORTHO05D001345 1.4e-86 324.3 395 54.7
Migut.G01335 Erythranthe guttata HOM05D007981 ORTHO05D001345 1.1e-78 298.1 383 53.5
Oeu022685.1 Olea europaea HOM05D007981 ORTHO05D001345 1.2e-50 204.9 410 43.2
SalBow2G2157 Salvia bowleyana HOM05D007981 ORTHO05D001345 1.5e-40 171.4 420 36.4
Hma1.2p1_0662F.1_g198260 Hydrangea macrophylla HOM05D007981 ORTHO05D001345 3.4e-40 170.2 396 37.6
Cc09_g04330 Coffea canephora HOM05D007981 ORTHO05D001345 8.4e-39 165.6 420 37.4
ECA246G2938 Erigeron canadensis HOM05D007981 ORTHO05D001345 2.1e-37 161.0 434 37.3
GSVIVG01031362001 Vitis vinifera HOM05D007981 ORTHO05D001345 2.7e-37 160.6 406 36.5
MBI07_g42070_MAGBIO Magnolia biondii HOM05D007981 ORTHO05D001345 8.6e-36 155.6 403 36.0
Lsat_1_v5_gn_3_25100 Lactuca sativa HOM05D007981 ORTHO05D001345 8.9e-33 145.6 412 36.4
TAR633G1356 Trochodendron aralioides HOM05D007981 ORTHO05D001345 3.4e-32 143.7 394 34.5
Manes.12G000800 Manihot esculenta HOM05D007981 ORTHO05D001345 1.7e-31 141.4 417 35.0
Actinidia19656 Actinidia chinensis HOM05D007981 ORTHO05D001345 1.2e-29 135.2 442 32.1
PGSC0003DMG400042123 Solanum tuberosum HOM05D007981 ORTHO05D001345 1.2e-29 135.2 399 35.1
SalBow1G1067 Salvia bowleyana HOM05D007981 ORTHO05D001345 7.8e-29 132.5 120 60.0
Solyc11g008840.3 Solanum lycopersicum HOM05D007981 ORTHO05D001345 3.0e-28 130.6 402 33.6
SalBow1G7719 Salvia bowleyana HOM05D007981 ORTHO05D001345 8.7e-28 129.0 409 31.8
CSS0007963 Camellia sinensis var. sinensis HOM05D007981 ORTHO05D001345 5.6e-27 126.3 417 34.1
Ciclev10017970m.g Citrus clementina HOM05D007981 ORTHO05D001345 5.6e-27 126.3 406 33.5
TAR636G1519 Trochodendron aralioides HOM05D007981 ORTHO05D001345 5.6e-27 126.3 401 33.9
CAN.G691.25 Capsicum annuum HOM05D007981 ORTHO05D001345 8.1e-26 122.5 403 33.3
Peaxi162Scf00344g00031 Petunia axillaris HOM05D007981 ORTHO05D001345 2.4e-25 120.9 416 34.1
Thecc.09G196000 Theobroma cacao HOM05D007981 ORTHO05D001345 2.4e-25 120.9 381 32.8
Rhsim05G0162500 Rhododendron simsii HOM05D007981 ORTHO05D001345 1.2e-24 118.6 423 30.3
Atru.chr10.126 Acer truncatum HOM05D007981 ORTHO05D001345 2.6e-24 117.5 431 31.1
TWI36G0229 Tripterygium wilfordii HOM05D007981 ORTHO05D001345 9.9e-24 115.5 420 33.1
FAN09G0734 Fragaria x ananassa HOM05D007981 ORTHO05D001345 1.6e-21 108.2 424 30.2
Lj2C407T2 Lonicera japonica HOM05D007981 ORTHO05D001345 2.7e-21 107.5 399 29.8
FvH4_6g00040 Fragaria vesca HOM05D007981 ORTHO05D001345 7.9e-21 105.9 423 30.0
Lj2C405T1 Lonicera japonica HOM05D007981 ORTHO05D001345 3.0e-20 104.0 399 29.6
PGR031G0831 Punica granatum HOM05D007981 ORTHO05D001345 8.7e-20 102.4 390 31.5
Prupe.6G365700 Prunus persica HOM05D007981 ORTHO05D001345 9.6e-19 99.0 109 55.0
ClCG01G001160 Citrullus lanatus HOM05D007981 ORTHO05D001345 2.4e-17 94.4 391 30.9
Aqoxy1G01338 Aquilegia oxysepala HOM05D007981 ORTHO05D001345 5.3e-17 93.2 481 28.7
Gohir.A05G001200 Gossypium hirsutum HOM05D007981 ORTHO05D001345 2.2e-15 87.8 100 48.0
Gorai.009G001400 Gossypium raimondii HOM05D007981 ORTHO05D001345 2.2e-15 87.8 100 48.0
Os08g0543000 Oryza sativa ssp. japonica HOM05D007981 ORTHO05D001345 2.2e-15 87.8 107 47.7
Dinv03280 Davidia involucrata HOM05D007981 ORTHO05D001345 3.8e-15 87.0 373 30.3
Gohir.D05G001500 Gossypium hirsutum HOM05D007981 ORTHO05D001345 4.9e-15 86.7 105 45.7
MELO3C005819.2 Cucumis melo HOM05D007981 ORTHO05D001345 2.4e-14 84.3 401 30.9
Lj3g0009424 Lotus japonicus HOM05D007981 ORTHO05D001345 4.2e-14 83.6 412 28.4
Os09g0518600 Oryza sativa ssp. japonica HOM05D007981 ORTHO05D001345 3.5e-13 80.5 98 46.9
PSO357G0025 Papaver somniferum HOM05D034346 ORTHO05D001345 3.5e-13 80.5 421 29.2
Phvul.011G197200 Phaseolus vulgaris HOM05D007981 ORTHO05D001345 6.0e-13 79.7 400 28.0
VMungo1127G1819 Vigna mungo HOM05D007981 ORTHO05D001345 2.3e-12 77.8 330 29.7
Sopen11g004620 Solanum pennellii HOM05D007981 ORTHO05D001345 8.7e-12 75.9 143 42.7
ATR0743G259 Amborella trichopoda HOM05D001930 ORTHO05D001345 1.5e-11 75.1 120 43.3
FAN14G0327 Fragaria x ananassa HOM05D007981 ORTHO05D001345 1.5e-11 75.1 360 28.6
Nn2g13688 Nelumbo nucifera HOM05D001930 ORTHO05D001345 2.5e-11 74.3 467 27.0
Glyma.15G228000 Glycine max HOM05D007981 ORTHO05D001345 3.3e-11 73.9 397 26.4
Medtr8g040940 Medicago truncatula HOM05D007981 ORTHO05D001345 5.6e-11 73.2 412 26.9
Zm00001eb037390 Zea mays HOM05D007981 ORTHO05D001345 5.6e-11 73.2 103 42.7
DCAR_031612 Daucus carota HOM05D007981 ORTHO05D001345 7.4e-11 72.8 435 28.0
MBI07_g10349_MAGBIO Magnolia biondii HOM05D001930 ORTHO05D001345 1.6e-10 71.6 81 49.4
HPP92_001255 Vanilla planifolia HOM05D007981 ORTHO05D001345 1.6e-10 71.6 111 42.3
arahy.Tifrunner.gnm1.ann1.8NJ4D9 Arachis hypogaea HOM05D007981 ORTHO05D001345 2.1e-10 71.2 398 27.9
Potri.010G177000 Populus trichocarpa HOM05D007981 ORTHO05D001345 8.1e-10 69.3 304 31.2
Sabra10G0136000 Salix brachista HOM05D007981 ORTHO05D001345 1.1e-09 68.9 156 40.4
THA.LOC104810417 Tarenaya hassleriana HOM05D001930 ORTHO05D001345 1.1e-09 68.9 150 41.3
arahy.Tifrunner.gnm1.ann1.26SKGH Arachis hypogaea HOM05D007981 ORTHO05D001345 1.4e-09 68.6 385 27.3
Duzib093G2086 Durio zibethinus HOM05D001930 ORTHO05D001345 1.8e-09 68.2 406 25.9
Nitab4.5_0001653g0100 Nicotiana tabacum HOM05D007981 ORTHO05D001345 4.0e-09 67.0 183 38.8
Psat4g190600 Pisum sativum HOM05D007981 ORTHO05D001345 4.0e-09 67.0 426 24.4
Hma1.2p1_0281F.1_g113000 Hydrangea macrophylla HOM05D001930 ORTHO05D001345 6.9e-09 66.2 477 25.6
Dinv17980 Davidia involucrata HOM05D001930 ORTHO05D001345 1.2e-08 65.5 495 25.1
Actinidia13930 Actinidia chinensis HOM05D001930 ORTHO05D001345 3.4e-08 63.9 432 26.2
Sed0005322 Sechium edule HOM05D007981 ORTHO05D001345 3.4e-08 63.9 380 26.3
PSO339G3119 Papaver somniferum HOM05D001930 ORTHO05D001345 4.5e-08 63.5 94 42.6
PSO801G0843 Papaver somniferum HOM05D001930 ORTHO05D001345 4.5e-08 63.5 94 42.6
GSVIVG01032844001 Vitis vinifera HOM05D001930 ORTHO05D001345 4.5e-08 63.5 462 24.7
HanXRQChr14g0459861 Helianthus annuus HOM05D001930 ORTHO05D001345 1.0e-07 62.4 456 25.9
Migut.F00675 Erythranthe guttata HOM05D001930 ORTHO05D001345 1.7e-07 61.6 530 26.0
MBI14_g28262_MAGBIO Magnolia biondii HOM05D001930 ORTHO05D001345 1.7e-07 61.6 470 26.6
C03p26660 Brassica napus HOM05D001930 ORTHO05D001345 2.2e-07 61.2 150 38.0
Lalb_Chr10g0105111 Lupinus albus HOM05D001930 ORTHO05D001345 2.2e-07 61.2 97 39.2
Ca_15267_v3 Cicer arietinum L. HOM05D001930 ORTHO05D001345 3.8e-07 60.5 101 41.6
Eucgr.G03055 Eucalyptus grandis HOM05D001930 ORTHO05D001345 4.9e-07 60.1 156 35.9
Phvul.001G241800 Phaseolus vulgaris HOM05D001930 ORTHO05D001345 4.9e-07 60.1 530 24.5
Lalb_Chr03g0043161 Lupinus albus HOM05D001930 ORTHO05D001345 6.5e-07 59.7 457 25.2
HPP92_011709 Vanilla planifolia HOM05D007981 ORTHO05D001345 6.5e-07 59.7 450 26.7
Atru.chr12.18 Acer truncatum HOM05D001930 ORTHO05D001345 1.1e-06 58.9 99 39.4
Psat3g128880 Pisum sativum HOM05D001930 ORTHO05D001345 1.1e-06 58.9 456 24.6
SalBow6G0604 Salvia bowleyana HOM05D001930 ORTHO05D001345 1.1e-06 58.9 514 25.5
BcaB01g03592 Brassica carinata HOM05D001930 ORTHO05D001345 1.4e-06 58.5 150 38.0
BcaC01g05440 Brassica carinata HOM05D001930 ORTHO05D001345 1.4e-06 58.5 150 38.0
A03p22510 Brassica napus HOM05D001930 ORTHO05D001345 1.4e-06 58.5 150 38.0
C05p58890 Brassica napus HOM05D001930 ORTHO05D001345 1.4e-06 58.5 171 31.6
BolC3t15051H Brassica oleracea HOM05D001930 ORTHO05D001345 1.4e-06 58.5 150 38.0
BraA03t11477Z Brassica rapa HOM05D001930 ORTHO05D001345 1.4e-06 58.5 150 38.0
CSS0031125 Camellia sinensis var. sinensis HOM05D001930 ORTHO05D001345 1.4e-06 58.5 476 27.3
THA.LOC104810086 Tarenaya hassleriana HOM05D001930 ORTHO05D001345 1.4e-06 58.5 148 37.2
arahy.Tifrunner.gnm1.ann1.1VS4ZL Arachis hypogaea HOM05D001930 ORTHO05D001345 1.9e-06 58.2 96 41.7
Duzib106G1464 Durio zibethinus HOM05D001930 ORTHO05D001345 1.9e-06 58.2 148 34.5
MD04G1150900 Malus domestica HOM05D001930 ORTHO05D001345 1.9e-06 58.2 160 33.1
Sp4g22360 Schrenkiella parvula HOM05D001930 ORTHO05D001345 1.9e-06 58.2 150 38.7
Hund13841 Selenicereus undatus HOM05D001930 ORTHO05D001345 1.9e-06 58.2 146 35.6
TPR.G38435 Trifolium pratense HOM05D001930 ORTHO05D001345 1.9e-06 58.2 112 34.8
arahy.Tifrunner.gnm1.ann1.I8BS46 Arachis hypogaea HOM05D001930 ORTHO05D001345 2.5e-06 57.8 99 39.4
COL.COLO4_14547 Corchorus olitorius HOM05D001930 ORTHO05D001345 2.5e-06 57.8 148 36.5
A05p06400 Brassica napus HOM05D001930 ORTHO05D001345 3.2e-06 57.4 147 37.4
BraA05t19608Z Brassica rapa HOM05D001930 ORTHO05D001345 3.2e-06 57.4 147 37.4
Ca_05952_v3 Cicer arietinum L. HOM05D001930 ORTHO05D001345 3.2e-06 57.4 98 36.7
Gohir.D04G067400 Gossypium hirsutum HOM05D001930 ORTHO05D001345 3.2e-06 57.4 99 38.4
MD12G1164800 Malus domestica HOM05D001930 ORTHO05D001345 3.2e-06 57.4 156 34.0
Nitab4.5_0005290g0030 Nicotiana tabacum HOM05D001930 ORTHO05D001345 3.2e-06 57.4 155 37.4
Peaxi162Scf01208g00017 Petunia axillaris HOM05D001930 ORTHO05D001345 3.2e-06 57.4 106 35.8
Potri.008G066900 Populus trichocarpa HOM05D001930 ORTHO05D001345 3.2e-06 57.4 174 33.9
CAN.G301.5 Capsicum annuum HOM05D001930 ORTHO05D001345 4.2e-06 57.0 155 36.8
Gohir.A04G089500 Gossypium hirsutum HOM05D001930 ORTHO05D001345 4.2e-06 57.0 175 31.4
MD07G1220000 Malus domestica HOM05D001930 ORTHO05D001345 4.2e-06 57.0 184 32.1
Manes.08G091400 Manihot esculenta HOM05D001930 ORTHO05D001345 4.2e-06 57.0 363 26.7
SEGI_04024 Sequoiadendron giganteum HOM05D001930 ORTHO05D001345 4.2e-06 57.0 488 26.0
SGA_v2.0_scaffold60G20991 Striga asiatica HOM05D001930 ORTHO05D001345 4.2e-06 57.0 497 25.6
Thhalv10016404m.g Eutrema salsugineum HOM05D001930 ORTHO05D001345 5.5e-06 56.6 150 38.7
Lsat_1_v5_gn_2_122761 Lactuca sativa HOM05D001930 ORTHO05D001345 5.5e-06 56.6 457 24.1
Oeu025644.2 Olea europaea HOM05D001930 ORTHO05D001345 5.5e-06 56.6 498 23.5
DCAR_028566 Daucus carota HOM05D001930 ORTHO05D001345 7.1e-06 56.2 155 34.2
Lj1A953G44 Lonicera japonica HOM05D001930 ORTHO05D001345 7.1e-06 56.2 93 38.7
MD01G1132400 Malus domestica HOM05D001930 ORTHO05D001345 7.1e-06 56.2 179 33.5
BcaB02g09056 Brassica carinata HOM05D001930 ORTHO05D001345 9.3e-06 55.8 98 38.8
C04p07410 Brassica napus HOM05D001930 ORTHO05D001345 9.3e-06 55.8 147 37.4
BolC4t22362H Brassica oleracea HOM05D001930 ORTHO05D001345 9.3e-06 55.8 147 37.4


User provided reference genes

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