Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G01237 Erythranthe guttata HOM05D027725 ORTHO05D189319 3.4e-115 418.3 205 100.0
Migut.G01233 Erythranthe guttata HOM05D027725 ORTHO05D190728 5.4e-105 384.4 205 91.7
Migut.G01236 Erythranthe guttata HOM05D027725 ORTHO05D190319 1.6e-69 266.5 167 81.4
Migut.G01017 Erythranthe guttata HOM05D027725 ORTHO05D190821 4.2e-33 145.6 88 81.8
CAN.G1256.7 Capsicum annuum HOM05D000236 ORTHO05D005787 4.3e-09 65.9 163 30.1
Solyc11g006190.3 Solanum lycopersicum HOM05D000236 ORTHO05D005787 1.6e-08 63.9 125 33.6
Sopen11g002120 Solanum pennellii HOM05D000236 ORTHO05D005787 1.6e-08 63.9 125 33.6
PGSC0003DMG400028695 Solanum tuberosum HOM05D000236 ORTHO05D005787 1.6e-08 63.9 136 31.6
Atru.chr6.1735 Acer truncatum HOM05D000236 ORTHO05D000192 6.1e-08 62.0 134 34.3
Nitab4.5_0007977g0010 Nicotiana tabacum HOM05D000236 ORTHO05D005787 8.0e-08 61.6 124 32.3
Psat6g142280 Pisum sativum HOM05D000236 ORTHO05D005787 8.0e-08 61.6 152 32.2
Peaxi162Scf00120g00519 Petunia axillaris HOM05D000236 ORTHO05D005787 1.0e-07 61.2 136 30.1
MSTRG.26657 Avicennia marina HOM05D000236 ORTHO05D000192 1.4e-07 60.8 127 34.6
MBI12_g10750_MAGBIO Magnolia biondii HOM05D000236 ORTHO05D000192 1.4e-07 60.8 147 32.0
Sed0023143 Sechium edule HOM05D000236 ORTHO05D000192 1.4e-07 60.8 174 29.9
DCAR_006796 Daucus carota HOM05D000236 ORTHO05D000192 1.8e-07 60.5 126 32.5
Hma1.2p1_0651F.1_g195770 Hydrangea macrophylla HOM05D000236 ORTHO05D000192 1.8e-07 60.5 118 37.3
Sed0017687 Sechium edule HOM05D000236 ORTHO05D000192 1.8e-07 60.5 135 32.6
Lsat_1_v5_gn_2_107660 Lactuca sativa HOM05D000236 ORTHO05D005787 3.0e-07 59.7 150 28.7
Hund05077 Selenicereus undatus HOM05D000236 ORTHO05D000192 3.0e-07 59.7 189 27.0
BcaB06g28707 Brassica carinata HOM05D000236 ORTHO05D000192 4.0e-07 59.3 156 32.1
Haze_22862 Corylus avellana HOM05D000236 ORTHO05D000192 4.0e-07 59.3 156 30.1
CDE06G0063 Ceratophyllum demersum HOM05D000236 ORTHO05D000192 5.2e-07 58.9 118 37.3
MD06G1004200 Malus domestica HOM05D000236 ORTHO05D000192 5.2e-07 58.9 167 31.1
Peaxi162Scf00102g01220 Petunia axillaris HOM05D000236 ORTHO05D000192 5.2e-07 58.9 124 33.1
Rhsim06G0003300 Rhododendron simsii HOM05D000236 ORTHO05D000192 5.2e-07 58.9 197 29.4
Sabra02G0125700 Salix brachista HOM05D000236 ORTHO05D000192 5.2e-07 58.9 118 37.3
Sed0002526 Sechium edule HOM05D000236 ORTHO05D000192 5.2e-07 58.9 174 28.7
CsaV3_5G003650 Cucumis sativus L. HOM05D000236 ORTHO05D000192 6.8e-07 58.5 172 28.5
HanXRQChr11g0322831 Helianthus annuus HOM05D000236 ORTHO05D005787 6.8e-07 58.5 153 31.4
unitig_749.g14316 Utricularia gibba HOM05D000236 ORTHO05D000192 6.8e-07 58.5 124 31.5
MSTRG.5803 Avicennia marina HOM05D000236 ORTHO05D000192 8.9e-07 58.2 131 32.8
CiPaw.12G093900 Carya illinoinensis HOM05D000236 ORTHO05D000192 8.9e-07 58.2 146 28.1
Gohir.D01G087000 Gossypium hirsutum HOM05D000236 ORTHO05D000192 8.9e-07 58.2 147 31.3
Gorai.002G112700 Gossypium raimondii HOM05D000236 ORTHO05D000192 8.9e-07 58.2 147 31.3
BcaC02g07807 Brassica carinata HOM05D000236 ORTHO05D000192 1.2e-06 57.8 149 31.5
C04p63150 Brassica napus HOM05D000236 ORTHO05D000192 1.2e-06 57.8 149 31.5
CAN.G1394.38 Capsicum annuum HOM05D000236 ORTHO05D000192 1.2e-06 57.8 146 29.5
CiPaw.07G133600 Carya illinoinensis HOM05D000236 ORTHO05D000192 1.2e-06 57.8 146 31.5
Lalb_Chr10g0097101 Lupinus albus HOM05D000236 ORTHO05D000192 1.2e-06 57.8 116 33.6
Sp4g15970 Schrenkiella parvula HOM05D000236 ORTHO05D000192 1.2e-06 57.8 139 30.9
Aqoxy1G00963 Aquilegia oxysepala HOM05D000236 ORTHO05D000192 1.5e-06 57.4 125 33.6
BolC4t27787H Brassica oleracea HOM05D000236 ORTHO05D000192 1.5e-06 57.4 139 31.7
MELO3C005590.2 Cucumis melo HOM05D000236 ORTHO05D000192 1.5e-06 57.4 124 33.9
ECA238G1098 Erigeron canadensis HOM05D000236 ORTHO05D005787 1.5e-06 57.4 136 30.9
Lj8A254T76 Lonicera japonica HOM05D000236 ORTHO05D000192 1.5e-06 57.4 159 28.9
Manes.01G071800 Manihot esculenta HOM05D000236 ORTHO05D000192 1.5e-06 57.4 158 29.7
Potri.001G143500 Populus trichocarpa HOM05D000236 ORTHO05D000192 1.5e-06 57.4 134 32.1
BcaB01g03927 Brassica carinata HOM05D000236 ORTHO05D000192 2.0e-06 57.0 139 31.7
A04p25870 Brassica napus HOM05D000236 ORTHO05D003103 2.0e-06 57.0 139 30.9
BraA04t18090Z Brassica rapa HOM05D000236 ORTHO05D000192 2.0e-06 57.0 139 30.9
Eucgr.E00486 Eucalyptus grandis HOM05D000236 ORTHO05D000192 2.0e-06 57.0 144 30.6
Eucgr.F03602 Eucalyptus grandis HOM05D000236 ORTHO05D000192 2.0e-06 57.0 141 33.3
Lj4A811T123 Lonicera japonica HOM05D000236 ORTHO05D000192 2.0e-06 57.0 132 33.3
Lj1g0020846 Lotus japonicus HOM05D000236 ORTHO05D005787 2.0e-06 57.0 166 30.7
Manes.01G258800 Manihot esculenta HOM05D000236 ORTHO05D000192 2.0e-06 57.0 136 31.6
PGR031G3142 Punica granatum HOM05D000236 ORTHO05D000192 2.0e-06 57.0 140 30.0
PGSC0003DMG400012512 Solanum tuberosum HOM05D000236 ORTHO05D000192 2.0e-06 57.0 144 29.9
Gohir.A01G101900 Gossypium hirsutum HOM05D000236 ORTHO05D000192 2.6e-06 56.6 133 32.3
Peaxi162Scf00008g01918 Petunia axillaris HOM05D000236 ORTHO05D000192 2.6e-06 56.6 140 35.0
Hund14665 Selenicereus undatus HOM05D000236 ORTHO05D000192 2.6e-06 56.6 142 28.9
Actinidia17076 Actinidia chinensis HOM05D000236 ORTHO05D000192 3.4e-06 56.2 152 31.6
Aqoxy2G01472 Aquilegia oxysepala HOM05D000236 ORTHO05D014829 3.4e-06 56.2 145 31.7
CANSAT25G0041 Cannabis sativa HOM05D000236 ORTHO05D000192 3.4e-06 56.2 145 31.0
Cpa.g.sc18.240 Carica papaya HOM05D000236 ORTHO05D000192 3.4e-06 56.2 116 33.6
Ciclev10021222m.g Citrus clementina HOM05D000236 ORTHO05D000192 3.4e-06 56.2 124 33.1
CsaV3_4G037640 Cucumis sativus L. HOM05D000236 ORTHO05D000192 3.4e-06 56.2 134 29.9
Hma1.2p1_0631F.1_g192300 Hydrangea macrophylla HOM05D000236 ORTHO05D000192 3.4e-06 56.2 138 33.3
MBI17_g38201_MAGBIO Magnolia biondii HOM05D000236 ORTHO05D000192 3.4e-06 56.2 140 32.1
MD12G1245000 Malus domestica HOM05D000236 ORTHO05D005787 3.4e-06 56.2 152 30.3
Psat6g078600 Pisum sativum HOM05D000236 ORTHO05D000192 3.4e-06 56.2 146 28.8
PGR083G0904 Punica granatum HOM05D000236 ORTHO05D000192 3.4e-06 56.2 145 29.0
SEGI_31821 Sequoiadendron giganteum HOM05D000236 ORTHO05D000192 3.4e-06 56.2 124 33.9
Solyc08g007530.4 Solanum lycopersicum HOM05D000236 ORTHO05D000192 3.4e-06 56.2 142 30.3
Thecc.08G099900 Theobroma cacao HOM05D000236 ORTHO05D000192 3.4e-06 56.2 132 32.6
MSTRG.25556 Avicennia marina HOM05D000236 ORTHO05D000192 4.4e-06 55.8 164 28.0
CSS0041356 Camellia sinensis var. sinensis HOM05D000236 ORTHO05D000192 4.4e-06 55.8 145 32.4
Cpa.g.sc29.71 Carica papaya HOM05D000236 ORTHO05D000192 4.4e-06 55.8 124 33.1
Cfa012033 Carpinus fangiana HOM05D000236 ORTHO05D000192 4.4e-06 55.8 148 29.7
ClCG11G000430 Citrullus lanatus HOM05D000236 ORTHO05D000192 4.4e-06 55.8 124 32.3
Duzib041G0790 Durio zibethinus HOM05D000236 ORTHO05D000192 4.4e-06 55.8 124 33.1
FAN04G2195 Fragaria x ananassa HOM05D000236 ORTHO05D000192 4.4e-06 55.8 132 33.3
FAN13G1709 Fragaria x ananassa HOM05D000236 ORTHO05D000192 4.4e-06 55.8 132 33.3
FAN18G4264 Fragaria x ananassa HOM05D000236 ORTHO05D000192 4.4e-06 55.8 132 34.1
Medtr1g061530 Medicago truncatula HOM05D000236 ORTHO05D000192 4.4e-06 55.8 135 30.4
Potri.019G014200 Populus trichocarpa HOM05D000236 ORTHO05D005787 4.4e-06 55.8 151 29.1
GSVIVG01013426001 Vitis vinifera HOM05D000236 ORTHO05D000192 4.4e-06 55.8 139 31.7
AT4G22770 Arabidopsis thaliana HOM05D000236 ORTHO05D000192 5.7e-06 55.5 146 28.8
CAN.G630.54 Capsicum annuum HOM05D000236 ORTHO05D000192 5.7e-06 55.5 124 31.5
CiPaw.12G103500 Carya illinoinensis HOM05D000236 ORTHO05D000192 5.7e-06 55.5 148 29.7
Dinv06986 Davidia involucrata HOM05D000236 ORTHO05D005787 5.7e-06 55.5 140 29.3
MD00G1114400 Malus domestica HOM05D000236 ORTHO05D005787 5.7e-06 55.5 161 28.6
Phvul.003G216000 Phaseolus vulgaris HOM05D000236 ORTHO05D000192 5.7e-06 55.5 148 29.1
QL12p015380 Quercus lobata HOM05D000236 ORTHO05D000192 5.7e-06 55.5 148 29.1
Sabra03G0081000 Salix brachista HOM05D000236 ORTHO05D000192 5.7e-06 55.5 156 30.1
Sed0003892 Sechium edule HOM05D000236 ORTHO05D000192 5.7e-06 55.5 133 29.3
ATR0680G105 Amborella trichopoda HOM05D000236 ORTHO05D000192 7.5e-06 55.1 143 32.2
ATR0820G282 Amborella trichopoda HOM05D000236 ORTHO05D000192 7.5e-06 55.1 124 29.8
CiPaw.11G136200 Carya illinoinensis HOM05D000236 ORTHO05D000192 7.5e-06 55.1 123 31.7
Gohir.A09G136300 Gossypium hirsutum HOM05D000236 ORTHO05D000192 7.5e-06 55.1 154 31.8
Lalb_Chr17g0339791 Lupinus albus HOM05D000236 ORTHO05D000192 7.5e-06 55.1 119 33.6
MBI04_g45972_MAGBIO Magnolia biondii HOM05D000236 ORTHO05D000192 7.5e-06 55.1 142 30.3
Nitab4.5_0000633g0070 Nicotiana tabacum HOM05D000236 ORTHO05D000192 7.5e-06 55.1 124 30.6
Nitab4.5_0001816g0150 Nicotiana tabacum HOM05D000236 ORTHO05D000192 7.5e-06 55.1 124 32.3
PGR031G3968 Punica granatum HOM05D000236 ORTHO05D000192 7.5e-06 55.1 148 29.1
Solyc08g079630.3 Solanum lycopersicum HOM05D000236 ORTHO05D000192 7.5e-06 55.1 124 31.5
Sopen08g027990 Solanum pennellii HOM05D000236 ORTHO05D000192 7.5e-06 55.1 124 31.5
PGSC0003DMG400003925 Solanum tuberosum HOM05D000236 ORTHO05D000192 7.5e-06 55.1 124 31.5
TWI77G0119 Tripterygium wilfordii HOM05D000236 ORTHO05D000192 7.5e-06 55.1 127 34.6
TAR636G1270 Trochodendron aralioides HOM05D000236 ORTHO05D000192 7.5e-06 55.1 118 34.7
Atru.chr9.1461 Acer truncatum HOM05D000236 ORTHO05D000192 9.8e-06 54.7 124 32.3
MSTRG.10344 Avicennia marina HOM05D000236 ORTHO05D000192 9.8e-06 54.7 118 33.9
Dinv37751 Davidia involucrata HOM05D000236 ORTHO05D000192 9.8e-06 54.7 124 30.6
Glyma.03G011200 Glycine max HOM05D000236 ORTHO05D000192 9.8e-06 54.7 118 34.7
Glyma.17G136200 Glycine max HOM05D000236 ORTHO05D000192 9.8e-06 54.7 148 28.4
Gohir.A04G066600 Gossypium hirsutum HOM05D000236 ORTHO05D000192 9.8e-06 54.7 147 32.7
Manes.02G032537 Manihot esculenta HOM05D000236 ORTHO05D000192 9.8e-06 54.7 141 30.5
Nitab4.5_0005241g0050 Nicotiana tabacum HOM05D000236 ORTHO05D000192 9.8e-06 54.7 124 31.5
PSO478G0079 Papaver somniferum HOM05D000236 ORTHO05D000192 9.8e-06 54.7 118 33.1
PSO782G4038 Papaver somniferum HOM05D000236 ORTHO05D000192 9.8e-06 54.7 118 33.1
Peaxi162Scf00271g00038 Petunia axillaris HOM05D000236 ORTHO05D000192 9.8e-06 54.7 124 31.5
Peaxi162Scf01178g00112 Petunia axillaris HOM05D000236 ORTHO05D000192 9.8e-06 54.7 131 29.8
Potri.005G256500 Populus trichocarpa HOM05D000236 ORTHO05D000192 9.8e-06 54.7 161 28.6
Potri.014G082100 Populus trichocarpa HOM05D000236 ORTHO05D000192 9.8e-06 54.7 137 31.4
Sed0023341 Sechium edule HOM05D000236 ORTHO05D000192 9.8e-06 54.7 124 29.8
TWI53G2091 Tripterygium wilfordii HOM05D000236 ORTHO05D000192 9.8e-06 54.7 117 36.8
TWI59G0807 Tripterygium wilfordii HOM05D000236 ORTHO05D000192 9.8e-06 54.7 129 32.6
TAR374G1224 Trochodendron aralioides HOM05D000236 ORTHO05D000192 9.8e-06 54.7 145 29.7
GSVIVG01019937001 Vitis vinifera HOM05D000236 ORTHO05D000192 9.8e-06 54.7 124 32.3


User provided reference genes

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