Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G01175 Erythranthe guttata HOM05D007215 ORTHO05D009019 5.4e-97 357.8 203 100.0
MSTRG.9732 Avicennia marina HOM05D007215 ORTHO05D009019 5.6e-54 214.9 200 64.0
EL10Ac3g06096 Beta vulgaris HOM05D007215 ORTHO05D009019 3.9e-47 192.2 203 56.7
Cc03_g14170 Coffea canephora HOM05D007215 ORTHO05D009019 2.5e-46 189.5 201 65.2
SGA_v2.0_scaffold12G06193 Striga asiatica HOM05D007215 ORTHO05D009019 5.6e-46 188.3 186 61.8
Sc25g0002820 Simmondsia chinensis HOM05D007215 ORTHO05D009019 1.3e-45 187.2 200 54.0
MSTRG.4303 Avicennia marina HOM05D007215 ORTHO05D009019 4.8e-45 185.3 200 60.0
QL10p055936 Quercus lobata HOM05D007215 ORTHO05D009019 2.4e-44 183.0 201 54.7
CiPaw.01G170200 Carya illinoinensis HOM05D007215 ORTHO05D009019 2.6e-43 179.5 210 62.4
Glyma.07G207400 Glycine max HOM05D007215 ORTHO05D009019 3.4e-43 179.1 200 52.5
Cfa015271 Carpinus fangiana HOM05D007215 ORTHO05D009019 5.8e-43 178.3 202 58.4
Dinv33208 Davidia involucrata HOM05D007215 ORTHO05D009019 1.3e-42 177.2 199 59.8
Glyma.02G137900 Glycine max HOM05D007215 ORTHO05D009019 6.4e-42 174.9 203 51.7
CAN.G136.10 Capsicum annuum HOM05D007215 ORTHO05D009019 8.4e-42 174.5 203 67.5
arahy.Tifrunner.gnm1.ann1.9WZ3F5 Arachis hypogaea HOM05D007215 ORTHO05D009019 1.1e-41 174.1 205 61.0
Solyc06g053440.3 Solanum lycopersicum HOM05D007215 ORTHO05D009019 1.9e-41 173.3 205 62.9
Ciclev10022275m.g Citrus clementina HOM05D007215 ORTHO05D009019 3.2e-41 172.6 210 62.4
Phvul.003G297000 Phaseolus vulgaris HOM05D007215 ORTHO05D009019 4.2e-41 172.2 197 52.8
VMungo0251G1340 Vigna mungo HOM05D007215 ORTHO05D009019 5.5e-41 171.8 200 51.5
Potri.019G112300 Populus trichocarpa HOM05D007215 ORTHO05D009019 7.1e-41 171.4 218 50.9
Prupe.1G207500 Prunus persica HOM05D007215 ORTHO05D009019 1.2e-40 170.6 222 51.4
FvH4_4g10370 Fragaria vesca HOM05D007215 ORTHO05D009019 1.6e-40 170.2 208 51.0
FAN17G2642 Fragaria x ananassa HOM05D007215 ORTHO05D009019 1.6e-40 170.2 211 51.7
Gohir.A10G144100 Gossypium hirsutum HOM05D007215 ORTHO05D009019 2.1e-40 169.9 215 48.8
Gorai.011G135400 Gossypium raimondii HOM05D007215 ORTHO05D009019 4.6e-40 168.7 215 48.8
Peaxi162Scf00483g00061 Petunia axillaris HOM05D007215 ORTHO05D009019 6.0e-40 168.3 193 56.0
Atru.chr4.1429 Acer truncatum HOM05D007215 ORTHO05D009019 7.9e-40 167.9 221 51.6
Psat7g121080 Pisum sativum HOM05D007215 ORTHO05D009019 7.9e-40 167.9 204 50.5
TWI38G1882 Tripterygium wilfordii HOM05D007215 ORTHO05D009019 7.9e-40 167.9 212 61.3
Thecc.04G165300 Theobroma cacao HOM05D007215 ORTHO05D009019 3.9e-39 165.6 214 61.7
AUR62002398 Chenopodium quinoa HOM05D007215 ORTHO05D009019 5.1e-39 165.2 182 61.5
Lalb_Chr05g0218881 Lupinus albus HOM05D007215 ORTHO05D009019 5.1e-39 165.2 200 51.5
RcHm_v2.0_Chr4g0405921 Rosa chinensis HOM05D007215 ORTHO05D009019 5.1e-39 165.2 198 52.5
TAR362G0943 Trochodendron aralioides HOM05D007215 ORTHO05D009019 5.1e-39 165.2 199 62.8
MD04G1049300 Malus domestica HOM05D007215 ORTHO05D009019 1.1e-38 164.1 257 44.7
CiPaw.02G100200 Carya illinoinensis HOM05D007215 ORTHO05D009019 1.9e-38 163.3 201 49.3
AUR62023787 Chenopodium quinoa HOM05D007215 ORTHO05D009019 3.3e-38 162.5 182 60.4
Eucgr.L00006 Eucalyptus grandis HOM05D007215 ORTHO05D009019 4.3e-38 162.2 195 63.1
Lj6P222T10 Lonicera japonica HOM05D007215 ORTHO05D009019 7.4e-38 161.4 182 56.0
Peaxi162Scf00180g00003 Petunia axillaris HOM05D007215 ORTHO05D009019 7.4e-38 161.4 195 52.3
TPR.G23547 Trifolium pratense HOM05D002328 ORTHO05D009019 9.6e-38 161.0 201 49.8
Lalb_Chr09g0328091 Lupinus albus HOM05D007215 ORTHO05D009019 2.8e-37 159.5 203 49.3
Sed0003072 Sechium edule HOM05D007215 ORTHO05D009019 3.7e-37 159.1 210 48.6
Ah.07g202820 Amaranthus hybridus HOM05D007215 ORTHO05D009019 4.8e-37 158.7 186 51.6
ClCG06G001110 Citrullus lanatus HOM05D007215 ORTHO05D009019 1.8e-36 156.8 208 48.6
HanXRQChr04g0110541 Helianthus annuus HOM05D007215 ORTHO05D009019 2.4e-36 156.4 204 50.5
Medtr4g087380 Medicago truncatula HOM05D007215 ORTHO05D009019 6.9e-36 154.8 203 47.3
Sabra19G0108300 Salix brachista HOM05D007215 ORTHO05D009019 1.2e-35 154.1 212 52.8
Manes.11G128800 Manihot esculenta HOM05D007215 ORTHO05D009019 3.4e-35 152.5 215 47.9
Nn7g37543 Nelumbo nucifera HOM05D007215 ORTHO05D009019 5.8e-35 151.8 203 61.1
Lju470C16T0 Lonicera japonica HOM05D007215 ORTHO05D009019 7.6e-35 151.4 184 53.3
Duzib268G1282 Durio zibethinus HOM05D007215 ORTHO05D009019 1.0e-34 151.0 213 52.1
HanXRQChr10g0285991 Helianthus annuus HOM05D007215 ORTHO05D009019 1.0e-34 151.0 202 59.9
Lj4g0027849 Lotus japonicus HOM05D007215 ORTHO05D009019 2.2e-34 149.8 205 59.5
MBI11_g16037_MAGBIO Magnolia biondii HOM05D007215 ORTHO05D009019 2.2e-34 149.8 204 56.4
Cpa.g.sc9.370 Carica papaya HOM05D007215 ORTHO05D009019 2.9e-34 149.4 155 57.4
CSS0011584 Camellia sinensis var. sinensis HOM05D007215 ORTHO05D009019 3.8e-34 149.1 186 53.2
Oeu015716.1 Olea europaea HOM05D007215 ORTHO05D009019 3.8e-34 149.1 182 54.9
PGSC0003DMG402016333 Solanum tuberosum HOM05D007215 ORTHO05D009019 3.8e-34 149.1 186 61.3
Duzib151G0080 Durio zibethinus HOM05D007215 ORTHO05D009019 8.4e-34 147.9 146 70.5
Oeu016616.1 Olea europaea HOM05D007215 ORTHO05D009019 8.4e-34 147.9 185 51.9
Oeu016617.1 Olea europaea HOM05D007215 ORTHO05D009019 8.4e-34 147.9 185 51.9
THA.LOC104804037 Tarenaya hassleriana HOM05D007215 ORTHO05D009019 1.1e-33 147.5 204 49.5
COL.COLO4_00135 Corchorus olitorius HOM05D007215 ORTHO05D009019 1.9e-33 146.7 145 73.8
PSO017G6467 Papaver somniferum HOM05D007215 ORTHO05D009019 1.9e-33 146.7 240 50.4
Sopen06g018520 Solanum pennellii HOM05D007215 ORTHO05D009019 3.2e-33 146.0 187 60.4
Lsat_1_v5_gn_5_190641 Lactuca sativa HOM05D007215 ORTHO05D009019 7.1e-33 144.8 192 60.9
Rhsim09G0009600 Rhododendron simsii HOM05D007215 ORTHO05D009019 7.1e-33 144.8 180 62.8
Nn1g09545 Nelumbo nucifera HOM05D007215 ORTHO05D009019 9.3e-33 144.4 204 56.9
Hma1.2p1_0150F.1_g066880 Hydrangea macrophylla HOM05D007215 ORTHO05D009019 1.6e-32 143.7 159 56.6
TAR633G2258 Trochodendron aralioides HOM05D007215 ORTHO05D009019 1.6e-32 143.7 190 59.5
C08p34680 Brassica napus HOM05D007215 ORTHO05D009019 2.1e-32 143.3 210 45.7
DCAR_027521 Daucus carota HOM05D007215 ORTHO05D009019 2.7e-32 142.9 186 48.9
Oeu021574.1 Olea europaea HOM05D007215 ORTHO05D009019 3.5e-32 142.5 185 60.5
BraA09t40633Z Brassica rapa HOM05D007215 ORTHO05D009019 6.0e-32 141.7 210 45.2
FAN22G1962 Fragaria x ananassa HOM05D007215 ORTHO05D009019 1.0e-31 141.0 190 49.5
Haze_01356 Corylus avellana HOM05D007215 ORTHO05D009019 3.0e-31 139.4 147 55.8
A09p52000 Brassica napus HOM05D007215 ORTHO05D009019 8.7e-31 137.9 210 44.8
PSO837G0056 Papaver somniferum HOM05D007215 ORTHO05D009019 1.5e-30 137.1 227 53.3
Migut.I00402 Erythranthe guttata HOM05D007215 ORTHO05D009019 3.3e-30 136.0 110 71.8
AT3G59680 Arabidopsis thaliana HOM05D007215 ORTHO05D009019 1.6e-29 133.7 209 45.0
BcaC07g40499 Brassica carinata HOM05D007215 ORTHO05D009019 4.8e-29 132.1 201 44.8
BolC8t51070H Brassica oleracea HOM05D007215 ORTHO05D009019 4.8e-29 132.1 201 44.8
ECA238G1604 Erigeron canadensis HOM05D007215 ORTHO05D009019 4.8e-29 132.1 187 61.0
Aqoxy2G03930 Aquilegia oxysepala HOM05D007215 ORTHO05D009019 6.3e-29 131.7 165 47.9
CARHR170050 Cardamine hirsuta HOM05D007215 ORTHO05D009019 6.3e-29 131.7 199 48.2
TAR633G0862 Trochodendron aralioides HOM05D007215 ORTHO05D009019 6.9e-28 128.3 159 64.8
PGR042G0468 Punica granatum HOM05D007215 ORTHO05D009019 1.5e-27 127.1 210 52.9
Carub.0005s2640 Capsella rubella HOM05D007215 ORTHO05D009019 3.4e-27 125.9 209 43.1
THA.LOC104816280 Tarenaya hassleriana HOM05D007215 ORTHO05D009019 4.5e-27 125.6 196 53.1
SalBow6G6024 Salvia bowleyana HOM05D007215 ORTHO05D009019 5.9e-27 125.2 204 46.6
Thhalv10006255m.g Eutrema salsugineum HOM05D007215 ORTHO05D009019 2.2e-26 123.2 204 41.7
AL5G41750 Arabidopsis lyrata HOM05D007215 ORTHO05D009019 5.0e-26 122.1 199 41.7
CsaV3_6G007050 Cucumis sativus L. HOM05D007215 ORTHO05D009019 8.4e-26 121.3 212 50.9
Sp5g03500 Schrenkiella parvula HOM05D007215 ORTHO05D009019 1.9e-25 120.2 209 52.2
GSVIVG01038146001 Vitis vinifera HOM05D007215 ORTHO05D009019 3.5e-24 115.9 114 60.5
HPP92_023723 Vanilla planifolia HOM05D007215 ORTHO05D009019 1.0e-23 114.4 138 50.7
Aa31LG10G13970 Aethionema arabicum HOM05D007215 ORTHO05D009019 3.0e-23 112.8 190 42.6
Lj6P211T14 Lonicera japonica HOM05D007215 ORTHO05D009019 5.1e-23 112.1 140 53.6
CANSAT56G1068 Cannabis sativa HOM05D007215 ORTHO05D009019 1.5e-22 110.5 236 37.7
CDE09G0824 Ceratophyllum demersum HOM05D007215 ORTHO05D009019 4.3e-22 109.0 199 37.7
MELO3C022424.2 Cucumis melo HOM05D007215 ORTHO05D009019 4.8e-21 105.5 188 52.1
ATR0743G235 Amborella trichopoda HOM05D007215 ORTHO05D009019 2.4e-20 103.2 141 45.4
CDE02G0746 Ceratophyllum demersum HOM05D007215 ORTHO05D009019 1.3e-18 97.4 195 37.4
Os01g0393300 Oryza sativa ssp. japonica HOM05D007215 ORTHO05D009019 6.5e-18 95.1 208 38.0
Gohir.D10G122900 Gossypium hirsutum HOM05D007215 ORTHO05D009019 1.1e-17 94.4 110 50.0
Os04g0495900 Oryza sativa ssp. japonica HOM05D007215 ORTHO05D009019 1.2e-16 90.9 210 45.7
HPP92_007596 Vanilla planifolia HOM05D007215 ORTHO05D009019 1.7e-13 80.5 146 39.0
Zm00001eb078580 Zea mays HOM05D007215 ORTHO05D009019 1.7e-13 80.5 212 45.3
MD17G1178000 Malus domestica HOM05D007215 ORTHO05D009019 1.0e-10 71.2 112 42.0


User provided reference genes

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