Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G01142 Erythranthe guttata HOM05D004887 ORTHO05D006168 1.5e-203 712.6 356 100.0
Migut.G01105 Erythranthe guttata HOM05D004887 ORTHO05D006168 4.4e-203 711.1 356 99.7
Migut.D02114 Erythranthe guttata HOM05D004887 ORTHO05D006168 4.8e-202 707.6 354 99.7
Oeu041027.1 Olea europaea HOM05D004887 ORTHO05D006168 6.8e-172 607.4 355 85.1
Migut.N02667 Erythranthe guttata HOM05D004887 ORTHO05D006168 2.6e-171 605.5 355 83.7
Dinv32870 Davidia involucrata HOM05D004887 ORTHO05D006168 1.3e-167 593.2 354 83.6
Hma1.2p1_0624F.1_g191380 Hydrangea macrophylla HOM05D004887 ORTHO05D006168 2.5e-166 589.0 355 82.8
Nitab4.5_0000610g0150 Nicotiana tabacum HOM05D004887 ORTHO05D006168 6.2e-165 584.3 354 81.6
Solyc11g073300.2 Solanum lycopersicum HOM05D004887 ORTHO05D006168 1.2e-163 580.1 351 82.6
Sopen11g030920 Solanum pennellii HOM05D004887 ORTHO05D006168 1.2e-163 580.1 351 82.3
PGR102G2111 Punica granatum HOM05D004887 ORTHO05D006168 1.3e-162 576.6 352 81.8
CAN.G661.4 Capsicum annuum HOM05D004887 ORTHO05D006168 6.4e-162 574.3 347 81.8
MSTRG.17840 Avicennia marina HOM05D004887 ORTHO05D006168 1.6e-160 569.7 354 79.7
Cpa.g.sc190.13 Carica papaya HOM05D004887 ORTHO05D006168 4.6e-160 568.2 349 81.7
Cc01_g12500 Coffea canephora HOM05D004887 ORTHO05D006168 1.0e-159 567.0 343 81.9
Lalb_Chr01g0003761 Lupinus albus HOM05D004887 ORTHO05D006168 1.3e-159 566.6 352 79.5
SalBow3G3342 Salvia bowleyana HOM05D004887 ORTHO05D006168 1.9e-158 562.8 374 75.9
DCAR_018895 Daucus carota HOM05D004887 ORTHO05D006168 3.3e-158 562.0 355 77.7
Potri.001G237000 Populus trichocarpa HOM05D004887 ORTHO05D006168 5.6e-158 561.2 347 79.8
GSVIVG01025008001 Vitis vinifera HOM05D004887 ORTHO05D006168 5.6e-158 561.2 356 78.7
COL.COLO4_18471 Corchorus olitorius HOM05D004887 ORTHO05D006168 7.3e-158 560.8 352 79.5
Glyma.11G141400 Glycine max HOM05D004887 ORTHO05D006168 7.3e-158 560.8 353 78.2
Ciclev10028710m.g Citrus clementina HOM05D004887 ORTHO05D006168 1.2e-157 560.1 353 78.8
TPR.G10217 Trifolium pratense HOM05D004887 ORTHO05D006168 2.8e-157 558.9 353 77.3
Gohir.A03G039700 Gossypium hirsutum HOM05D004887 ORTHO05D006168 1.4e-156 556.6 352 77.8
arahy.Tifrunner.gnm1.ann1.31UC9J Arachis hypogaea HOM05D004887 ORTHO05D006168 2.4e-156 555.8 352 77.3
Phvul.011G065900 Phaseolus vulgaris HOM05D004887 ORTHO05D006168 2.4e-156 555.8 353 77.1
Gohir.D03G128400 Gossypium hirsutum HOM05D004887 ORTHO05D006168 3.1e-156 555.4 352 77.8
Prupe.6G081500 Prunus persica HOM05D004887 ORTHO05D006168 3.1e-156 555.4 351 77.5
arahy.Tifrunner.gnm1.ann1.1V42NR Arachis hypogaea HOM05D004887 ORTHO05D006168 6.8e-156 554.3 352 77.0
Medtr4g063570 Medicago truncatula HOM05D004887 ORTHO05D006168 6.8e-156 554.3 352 77.0
AT5G59960 Arabidopsis thaliana HOM05D004887 ORTHO05D006168 1.2e-155 553.5 354 76.8
FvH4_3g35470 Fragaria vesca HOM05D004887 ORTHO05D006168 1.2e-155 553.5 356 77.8
FAN21G1310 Fragaria x ananassa HOM05D004887 ORTHO05D006168 1.2e-155 553.5 356 77.5
RcHm_v2.0_Chr5g0063631 Rosa chinensis HOM05D004887 ORTHO05D006168 1.2e-155 553.5 356 77.5
VMungo1127G0043 Vigna mungo HOM05D004887 ORTHO05D006168 1.5e-155 553.1 353 76.5
Gorai.003G135100 Gossypium raimondii HOM05D004887 ORTHO05D006168 2.0e-155 552.7 352 77.3
MD11G1143700 Malus domestica HOM05D004887 ORTHO05D006168 2.0e-155 552.7 352 78.1
Lj3g0008400 Lotus japonicus HOM05D004887 ORTHO05D006168 4.4e-155 551.6 351 78.3
CANSAT54G1644 Cannabis sativa HOM05D004887 ORTHO05D006168 3.8e-154 548.5 359 76.9
Thhalv10013947m.g Eutrema salsugineum HOM05D004887 ORTHO05D006168 3.8e-154 548.5 350 76.6
Eucgr.B02388 Eucalyptus grandis HOM05D004887 ORTHO05D006168 4.9e-154 548.1 352 75.9
MD03G1097100 Malus domestica HOM05D004887 ORTHO05D006168 4.9e-154 548.1 352 77.6
MBI14_g18541_MAGBIO Magnolia biondii HOM05D004887 ORTHO05D006168 8.4e-154 547.4 357 77.0
THA.LOC104799466 Tarenaya hassleriana HOM05D004887 ORTHO05D006168 1.4e-153 546.6 349 77.1
CiPaw.13G097700 Carya illinoinensis HOM05D004887 ORTHO05D006168 3.2e-153 545.4 354 77.4
TAR369G0226 Trochodendron aralioides HOM05D004887 ORTHO05D006168 3.2e-153 545.4 356 76.4
Actinidia37217 Actinidia chinensis HOM05D004887 ORTHO05D006168 7.1e-153 544.3 344 80.2
Sp6g21640 Schrenkiella parvula HOM05D004887 ORTHO05D006168 7.1e-153 544.3 350 75.1
Glyma.12G064800 Glycine max HOM05D004887 ORTHO05D006168 9.3e-153 543.9 353 76.2
Potri.009G028500 Populus trichocarpa HOM05D004887 ORTHO05D006168 9.3e-153 543.9 354 76.6
BcaB08g36206 Brassica carinata HOM05D004887 ORTHO05D006168 1.6e-152 543.1 350 74.9
Aqoxy4G02983 Aquilegia oxysepala HOM05D004887 ORTHO05D006168 2.7e-152 542.3 356 75.8
Peaxi162Scf00406g00137 Petunia axillaris HOM05D004887 ORTHO05D006168 3.5e-152 542.0 354 76.8
BcaC04g19652 Brassica carinata HOM05D004887 ORTHO05D006168 4.6e-152 541.6 350 74.9
C09p52470 Brassica napus HOM05D004887 ORTHO05D006168 4.6e-152 541.6 350 74.9
BolC9t58114H Brassica oleracea HOM05D004887 ORTHO05D006168 4.6e-152 541.6 350 74.9
BraA10t43799Z Brassica rapa HOM05D004887 ORTHO05D006168 6.0e-152 541.2 350 74.9
Duzib150G1309 Durio zibethinus HOM05D004887 ORTHO05D006168 6.0e-152 541.2 352 77.3
A10p17180 Brassica napus HOM05D004887 ORTHO05D006168 2.3e-151 539.3 350 74.6
AL8G36530 Arabidopsis lyrata HOM05D004887 ORTHO05D006168 1.5e-150 536.6 381 71.4
Nitab4.5_0003782g0060 Nicotiana tabacum HOM05D004887 ORTHO05D006168 1.9e-150 536.2 354 76.6
Manes.11G133000 Manihot esculenta HOM05D004887 ORTHO05D006168 2.5e-150 535.8 349 76.2
AL781U10010 Arabidopsis lyrata HOM05D004887 ORTHO05D006168 5.6e-150 534.6 346 76.0
HanXRQChr04g0107001 Helianthus annuus HOM05D004887 ORTHO05D006168 7.3e-150 534.3 349 75.6
Hund18927 Selenicereus undatus HOM05D004887 ORTHO05D006168 7.3e-150 534.3 355 73.8
Nn2g12934 Nelumbo nucifera HOM05D004887 ORTHO05D006168 1.6e-149 533.1 356 75.3
A03p11380 Brassica napus HOM05D004887 ORTHO05D006168 6.2e-149 531.2 352 74.7
Gorai.004G004400 Gossypium raimondii HOM05D004887 ORTHO05D006168 1.1e-148 530.4 351 74.1
Gohir.D08G010900 Gossypium hirsutum HOM05D004887 ORTHO05D006168 9.0e-148 527.3 351 73.8
ECA247G3571 Erigeron canadensis HOM05D004887 ORTHO05D006168 2.6e-147 525.8 354 74.3
SGA_v2.0_scaffold61G21266 Striga asiatica HOM05D004887 ORTHO05D006168 2.6e-147 525.8 328 82.9
Manes.04G032300 Manihot esculenta HOM05D004887 ORTHO05D006168 7.6e-147 524.2 350 74.9
Aa31LG1G12090 Aethionema arabicum HOM05D004887 ORTHO05D006168 9.9e-147 523.9 353 73.4
CsaV3_1G033620 Cucumis sativus L. HOM05D004887 ORTHO05D006168 3.8e-146 521.9 351 73.8
PSO384G2944 Papaver somniferum HOM05D004887 ORTHO05D006168 4.9e-146 521.5 357 72.0
Lsat_1_v5_gn_8_77921 Lactuca sativa HOM05D004887 ORTHO05D006168 9.3e-145 517.3 352 72.7
arahy.Tifrunner.gnm1.ann1.LTG2DU Arachis hypogaea HOM05D004887 ORTHO05D006168 1.6e-144 516.5 369 70.5
Lsat_1_v5_gn_9_22360 Lactuca sativa HOM05D004887 ORTHO05D006168 1.6e-144 516.5 349 72.8
Duzib168G0637 Durio zibethinus HOM05D004887 ORTHO05D006168 2.7e-144 515.8 352 74.4
HanXRQChr06g0175771 Helianthus annuus HOM05D004887 ORTHO05D006168 3.5e-144 515.4 342 75.7
EL10Ac7g15978 Beta vulgaris HOM05D004887 ORTHO05D006168 6.0e-144 514.6 352 71.0
PSO339G5095 Papaver somniferum HOM05D004887 ORTHO05D006168 1.0e-143 513.8 357 71.4
Sc21g0005570 Simmondsia chinensis HOM05D004887 ORTHO05D006168 2.1e-141 506.1 356 69.9
ClCG03G001950 Citrullus lanatus HOM05D004887 ORTHO05D006168 3.1e-140 502.3 377 68.7
HPP92_015526 Vanilla planifolia HOM05D004887 ORTHO05D006168 4.5e-139 498.4 355 69.9
Os01g0151600 Oryza sativa ssp. japonica HOM05D004887 ORTHO05D006168 1.7e-138 496.5 350 68.6
TWI79G0894 Tripterygium wilfordii HOM05D004887 ORTHO05D006168 2.7e-136 489.2 299 77.3
Rhsim13G0085300 Rhododendron simsii HOM05D001446 ORTHO05D001360 7.9e-136 487.6 392 65.3
Lj1A157T41 Lonicera japonica HOM05D004887 ORTHO05D006168 8.7e-135 484.2 327 74.6
Psat7g217880 Pisum sativum HOM05D004887 ORTHO05D006168 8.7e-135 484.2 382 66.0
CSS0048955 Camellia sinensis var. sinensis HOM05D004887 ORTHO05D006168 1.1e-134 483.8 354 70.3
CSS0023093 Camellia sinensis var. sinensis HOM05D004887 ORTHO05D006168 1.3e-133 480.3 327 75.8
Zm00001eb124290 Zea mays HOM05D004887 ORTHO05D006168 2.4e-132 476.1 344 67.4
arahy.Tifrunner.gnm1.ann1.RHUE9Y Arachis hypogaea HOM05D004887 ORTHO05D006168 4.9e-130 468.4 299 74.2
unitig_899.g14894 Utricularia gibba HOM05D004887 ORTHO05D006168 3.2e-129 465.7 306 76.1
Atru.chr3.3838 Acer truncatum HOM05D004887 ORTHO05D006168 4.2e-129 465.3 298 80.5
FAN11G2539 Fragaria x ananassa HOM05D004887 ORTHO05D006168 5.5e-129 464.9 347 71.2
QL01p032955 Quercus lobata HOM05D004887 ORTHO05D006168 1.8e-127 459.9 348 70.4
Cfa011464 Carpinus fangiana HOM05D004887 ORTHO05D006168 3.0e-127 459.1 346 69.9
Haze_24049 Corylus avellana HOM05D004887 ORTHO05D006168 3.9e-127 458.8 298 78.9
FAN25G2556 Fragaria x ananassa HOM05D004887 ORTHO05D006168 5.1e-127 458.4 347 70.3
AUR62009609 Chenopodium quinoa HOM05D004887 ORTHO05D006168 6.7e-127 458.0 317 73.2
Sed0009981 Sechium edule HOM05D004887 ORTHO05D006168 1.9e-126 456.4 285 77.2
MELO3C020709.2 Cucumis melo HOM05D004887 ORTHO05D006168 7.4e-126 454.5 295 74.2
Duzib170G0837 Durio zibethinus HOM05D004887 ORTHO05D006168 6.2e-125 451.4 371 64.7
Carub.0008s2049 Capsella rubella HOM05D004887 ORTHO05D006168 2.5e-121 439.5 256 82.4
THA.LOC104810819 Tarenaya hassleriana HOM05D004887 ORTHO05D006168 1.3e-119 433.7 298 73.5
BraA03t10452Z Brassica rapa HOM05D004887 ORTHO05D006168 5.1e-119 431.8 256 80.5
AUR62001822 Chenopodium quinoa HOM05D004887 ORTHO05D006168 8.2e-117 424.5 300 71.7
CDE07G1169 Ceratophyllum demersum HOM05D004887 ORTHO05D006168 2.2e-114 416.4 316 69.0
TWI31G1179 Tripterygium wilfordii HOM05D004887 ORTHO05D006168 3.6e-112 409.1 352 61.1
ATR0559G318 Amborella trichopoda HOM05D004887 ORTHO05D006168 1.4e-111 407.1 300 68.7
Psat7g218040 Pisum sativum HOM05D004887 ORTHO05D006168 1.8e-111 406.8 296 69.6
Lj2C1057T15 Lonicera japonica HOM05D004887 ORTHO05D006168 5.7e-110 401.7 234 81.6
FAN16G2077 Fragaria x ananassa HOM05D001446 ORTHO05D001360 4.7e-104 382.1 265 75.5
Pp3c8_24390 Physcomitrium patens HOM05D004887 ORTHO05D006168 6.1e-104 381.7 343 54.8
Actinidia07046 Actinidia chinensis HOM05D004887 ORTHO05D006168 1.4e-103 380.6 255 76.1
Sabra16G0142900 Salix brachista HOM05D001446 ORTHO05D001360 6.7e-103 378.3 386 56.7
Pp3c24_20310 Physcomitrium patens HOM05D004887 ORTHO05D006168 8.8e-103 377.9 343 54.5
Thecc.09G325700 Theobroma cacao HOM05D004887 ORTHO05D006168 7.0e-100 368.2 249 77.9
SMO118G0033 Selaginella moellendorffii HOM05D004887 ORTHO05D006168 2.6e-99 366.3 336 54.5
Dinv03548 Davidia involucrata HOM05D004887 ORTHO05D006168 3.5e-99 365.9 234 80.3
Mapoly0001s0555 Marchantia polymorpha HOM05D004887 ORTHO05D006168 1.3e-98 364.0 350 52.0
Ca_19183_v3 Cicer arietinum L. HOM05D004887 ORTHO05D006168 1.5e-97 360.5 261 73.2
TAR623G0510 Trochodendron aralioides HOM05D004887 ORTHO05D006168 1.9e-97 360.1 256 73.8
vmacro03096 Vaccinium macrocarpon HOM05D004887 ORTHO05D006168 3.6e-96 355.9 302 63.2
SalBow2G3032 Salvia bowleyana HOM05D004887 ORTHO05D006168 1.3e-93 347.4 253 71.5
AagrBONN_evm.TU.Sc2ySwM_344.5355 Anthoceros agrestis HOM05D004887 ORTHO05D006168 2.7e-91 339.7 289 55.4
CARHR273590 Cardamine hirsuta HOM05D004887 ORTHO05D006168 1.6e-88 330.5 192 82.3
Nn2g10420 Nelumbo nucifera HOM05D004887 ORTHO05D006168 4.1e-84 315.8 218 75.2
CBR_g46654 Chara braunii HOM05D004887 ORTHO05D006168 2.1e-80 303.5 341 46.9
Gohir.A08G000181 Gossypium hirsutum HOM05D004887 ORTHO05D006168 3.0e-79 299.7 230 67.8
Psat7g218000 Pisum sativum HOM05D004887 ORTHO05D006168 2.0e-75 287.0 195 72.8
Nitab4.5_0000610g0050 Nicotiana tabacum HOM05D004887 ORTHO05D006168 1.6e-67 260.8 367 44.1
CARHR273600 Cardamine hirsuta HOM05D004887 ORTHO05D006168 3.1e-55 219.9 159 69.2
PSO384G0451 Papaver somniferum HOM05D004887 ORTHO05D006168 1.7e-53 214.2 187 61.0
Sabra09G0019700 Salix brachista HOM05D004887 ORTHO05D006168 4.6e-43 179.5 171 58.5
Carub.0008s2068 Capsella rubella HOM05D004887 ORTHO05D006168 1.0e-34 151.8 100 73.0
C06p04980 Brassica napus HOM05D004887 ORTHO05D006168 1.2e-30 138.3 75 82.7
BolC6t35622H Brassica oleracea HOM05D004887 ORTHO05D006168 2.0e-30 137.5 76 82.9
A02p35440 Brassica napus HOM05D004887 ORTHO05D006168 2.6e-30 137.1 75 81.3
BraA02t08545Z Brassica rapa HOM05D004887 ORTHO05D006168 2.6e-30 137.1 75 81.3
C03p13170 Brassica napus HOM05D004887 ORTHO05D006168 5.8e-30 136.0 75 82.7
BolC3t13778H Brassica oleracea HOM05D004887 ORTHO05D006168 9.3e-28 128.6 63 88.9
Duzib205G1865 Durio zibethinus HOM05D004887 ORTHO05D006168 1.1e-25 121.7 136 52.9
C03p13130 Brassica napus HOM05D004887 ORTHO05D006168 6.7e-18 95.9 94 53.2
HanXRQChr05g0134321 Helianthus annuus HOM05D004887 ORTHO05D025733 6.3e-08 62.8 46 63.0
Lj1A771T11 Lonicera japonica HOM05D004887 ORTHO05D234499 1.4e-07 61.6 40 75.0
HanXRQChr07g0192801 Helianthus annuus HOM05D004887 ORTHO05D225384 3.1e-07 60.5 51 56.9
Lj1A771T12 Lonicera japonica HOM05D024127 ORTHO05D025733 9.0e-07 58.9 37 67.6


User provided reference genes

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