Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G01096 Erythranthe guttata HOM05D008132 ORTHO05D005763 1.1e-51 206.8 143 100.0
Migut.G00827 Erythranthe guttata HOM05D008132 ORTHO05D005763 2.0e-37 159.5 144 88.9
Migut.G01155 Erythranthe guttata HOM05D008132 ORTHO05D005763 1.7e-36 156.4 144 84.7
Migut.G00825 Erythranthe guttata HOM05D008132 ORTHO05D005763 2.1e-31 139.4 172 65.7
Migut.G00657 Erythranthe guttata HOM05D008132 ORTHO05D005763 5.4e-27 124.8 136 61.0
Migut.G01101 Erythranthe guttata HOM05D008132 ORTHO05D005763 5.4e-27 124.8 136 61.0
Migut.O00629 Erythranthe guttata HOM05D008132 ORTHO05D005763 5.4e-27 124.8 136 61.0
Migut.G01100 Erythranthe guttata HOM05D008132 ORTHO05D005763 7.8e-18 94.4 133 60.2
Oeu022674.1 Olea europaea HOM05D008132 ORTHO05D005763 9.5e-16 87.4 143 58.0
Migut.G01099 Erythranthe guttata HOM05D008132 ORTHO05D005763 5.2e-14 81.6 151 63.6
MSTRG.4386 Avicennia marina HOM05D008132 ORTHO05D005763 3.7e-12 75.5 143 37.8
MSTRG.9644 Avicennia marina HOM05D008132 ORTHO05D005763 1.4e-11 73.6 143 57.3
Medtr5g084330 Medicago truncatula HOM05D009657 ORTHO05D005763 1.4e-11 73.6 146 50.7
Oeu022673.1 Olea europaea HOM05D008132 ORTHO05D005763 5.4e-11 71.6 169 51.5
GSVIVG01030407001 Vitis vinifera HOM05D008132 ORTHO05D005763 9.2e-11 70.9 174 58.0
Actinidia09763 Actinidia chinensis HOM05D008132 ORTHO05D005763 1.6e-10 70.1 154 61.0
arahy.Tifrunner.gnm1.ann1.5E44W3 Arachis hypogaea HOM05D008132 ORTHO05D005763 2.7e-10 69.3 145 51.7
MSTRG.9648 Avicennia marina HOM05D008132 ORTHO05D005763 6.0e-10 68.2 132 46.2
MSTRG.4268 Avicennia marina HOM05D008132 ORTHO05D005763 7.8e-10 67.8 146 63.0
Cc03_g08950 Coffea canephora HOM05D008132 ORTHO05D005763 1.0e-09 67.4 144 55.6
QL08p029862 Quercus lobata HOM05D008132 ORTHO05D005763 1.0e-09 67.4 144 54.9
Nn1g09274 Nelumbo nucifera HOM05D008132 ORTHO05D005763 1.3e-09 67.0 137 56.2
Nn1g09275 Nelumbo nucifera HOM05D008132 ORTHO05D005763 1.3e-09 67.0 138 59.4
COL.COLO4_04941 Corchorus olitorius HOM05D008132 ORTHO05D005763 6.6e-09 64.7 149 56.4
MSTRG.9649 Avicennia marina HOM05D008132 ORTHO05D005763 8.6e-09 64.3 137 51.1
PGR042G2058 Punica granatum HOM05D008132 ORTHO05D005763 1.1e-08 63.9 137 54.7
EL10Ac9g22778 Beta vulgaris HOM05D008132 ORTHO05D005763 4.3e-08 62.0 146 52.7
Cpa.g.sc132.70 Carica papaya HOM05D008132 ORTHO05D005763 7.3e-08 61.2 135 48.9
Cpa.g.sc132.73 Carica papaya HOM05D008132 ORTHO05D005763 7.3e-08 61.2 135 48.9
COL.COLO4_04214 Corchorus olitorius HOM05D008132 ORTHO05D005763 7.3e-08 61.2 144 58.3
LjContig00357g0014262 Lotus japonicus HOM05D009657 ORTHO05D005763 9.5e-08 60.8 147 57.8
Thecc.01G236900 Theobroma cacao HOM05D008132 ORTHO05D005763 9.5e-08 60.8 145 50.3
Cc00_g35190 Coffea canephora HOM05D008132 ORTHO05D005763 2.8e-07 59.3 102 53.9
Glyma.14G051900 Glycine max HOM05D016758 ORTHO05D005763 6.2e-07 58.2 138 55.8
Glyma.14G052000 Glycine max HOM05D016758 ORTHO05D005763 8.1e-07 57.8 145 57.9
COL.COLO4_36679 Corchorus olitorius HOM05D008132 ORTHO05D005763 1.1e-06 57.4 139 54.7
SGA_v2.0_scaffold308G48098 Striga asiatica HOM05D002768 ORTHO05D002993 1.4e-06 57.0 55 67.3
COL.COLO4_04943 Corchorus olitorius HOM05D008132 ORTHO05D005763 1.8e-06 56.6 144 51.4
COL.COLO4_04942 Corchorus olitorius HOM05D008132 ORTHO05D005763 2.4e-06 56.2 139 60.4
Sopen09g035750 Solanum pennellii HOM05D012878 ORTHO05D005763 2.4e-06 56.2 144 55.6
BcaB08g34503 Brassica carinata HOM05D008158 ORTHO05D010323 4.0e-06 55.5 128 56.2
A03p44640 Brassica napus HOM05D008158 ORTHO05D010323 4.0e-06 55.5 135 53.3
Thecc.01G186700 Theobroma cacao HOM05D008132 ORTHO05D005763 4.0e-06 55.5 143 44.1
AT2G05540 Arabidopsis thaliana HOM05D008158 ORTHO05D010323 5.2e-06 55.1 130 60.0
THA.LOC104826607 Tarenaya hassleriana HOM05D008158 ORTHO05D010323 5.2e-06 55.1 131 55.7
MSTRG.9643 Avicennia marina HOM05D008132 ORTHO05D005763 6.8e-06 54.7 135 57.8
CANSAT56G4537 Cannabis sativa HOM05D008132 ORTHO05D005763 6.8e-06 54.7 131 58.8
BcaC01g03159 Brassica carinata HOM05D008158 ORTHO05D010323 8.9e-06 54.3 128 55.5
C03p55470 Brassica napus HOM05D008158 ORTHO05D010323 8.9e-06 54.3 128 49.2


User provided reference genes

Program Settings