Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G01001 Erythranthe guttata HOM05D005965 ORTHO05D007283 1.7e-252 875.5 440 100.0
MSTRG.20421 Avicennia marina HOM05D005965 ORTHO05D007283 1.7e-188 662.9 439 77.9
Migut.G01092 Erythranthe guttata HOM05D005965 ORTHO05D007283 6.0e-186 654.4 332 98.2
Oeu043357.2 Olea europaea HOM05D005965 ORTHO05D007283 1.6e-178 629.8 443 73.8
Actinidia21493 Actinidia chinensis HOM05D005965 ORTHO05D007283 4.5e-165 585.1 448 67.4
CSS0001755 Camellia sinensis var. sinensis HOM05D005965 ORTHO05D007283 1.7e-164 583.2 447 68.9
Migut.G01320 Erythranthe guttata HOM05D005965 ORTHO05D007283 2.9e-164 582.4 333 90.1
Ciclev10001128m.g Citrus clementina HOM05D005965 ORTHO05D007283 2.5e-160 569.3 455 66.4
Atru.chr2.26 Acer truncatum HOM05D005965 ORTHO05D007283 1.3e-159 567.0 451 65.6
DCAR_003352 Daucus carota HOM05D005965 ORTHO05D007283 2.2e-159 566.2 466 64.6
GSVIVG01031150001 Vitis vinifera HOM05D005965 ORTHO05D007283 6.3e-159 564.7 447 64.9
Gohir.D11G277600 Gossypium hirsutum HOM05D005965 ORTHO05D007283 1.4e-158 563.5 451 66.5
Rhsim05G0139400 Rhododendron simsii HOM05D005965 ORTHO05D007283 5.3e-158 561.6 487 61.8
Cpa.g.sc48.91 Carica papaya HOM05D005965 ORTHO05D007283 2.6e-157 559.3 446 66.8
Gorai.007G299800 Gossypium raimondii HOM05D005965 ORTHO05D007283 5.9e-157 558.1 461 65.5
SGA_v2.0_scaffold172G38992 Striga asiatica HOM05D005965 ORTHO05D007283 1.0e-156 557.4 463 65.7
QL03p021207 Quercus lobata HOM05D005965 ORTHO05D007283 2.2e-156 556.2 453 65.3
Prupe.6G321300 Prunus persica HOM05D005965 ORTHO05D007283 5.0e-156 555.1 449 65.3
Cc02_g33090 Coffea canephora HOM05D005965 ORTHO05D007283 1.1e-155 553.9 439 67.4
Sabra13G0016500 Salix brachista HOM05D005965 ORTHO05D007283 1.4e-155 553.5 453 65.3
Potri.013G017500 Populus trichocarpa HOM05D005965 ORTHO05D007283 3.2e-155 552.4 452 65.7
Manes.08G118100 Manihot esculenta HOM05D005965 ORTHO05D007283 4.2e-155 552.0 446 65.2
ECA246G4331 Erigeron canadensis HOM05D005965 ORTHO05D007283 7.2e-155 551.2 446 65.9
MD04G1201200 Malus domestica HOM05D005965 ORTHO05D007283 1.2e-154 550.4 450 63.8
unitig_699.g19668 Utricularia gibba HOM05D005965 ORTHO05D007283 1.2e-154 550.4 439 66.3
CiPaw.07G021000 Carya illinoinensis HOM05D005965 ORTHO05D007283 1.6e-154 550.1 451 65.0
Peaxi162Scf00949g00112 Petunia axillaris HOM05D005965 ORTHO05D007283 2.7e-154 549.3 448 66.1
Cfa006624 Carpinus fangiana HOM05D005965 ORTHO05D007283 7.9e-154 547.7 455 64.8
Solyc10g044780.2 Solanum lycopersicum HOM05D005965 ORTHO05D007283 1.8e-153 546.6 446 65.9
Sabra13G0020500 Salix brachista HOM05D005965 ORTHO05D007283 5.1e-153 545.0 429 66.9
Sopen10g013470 Solanum pennellii HOM05D005965 ORTHO05D007283 6.7e-153 544.7 446 65.7
HanXRQChr03g0072671 Helianthus annuus HOM05D005965 ORTHO05D007283 8.8e-153 544.3 447 65.8
Sc16g0008610 Simmondsia chinensis HOM05D005965 ORTHO05D007283 2.5e-152 542.7 446 63.7
PGSC0003DMG400007478 Solanum tuberosum HOM05D005965 ORTHO05D007283 3.3e-152 542.3 447 65.5
TWI12G0462 Tripterygium wilfordii HOM05D005965 ORTHO05D007283 1.7e-151 540.0 449 64.6
FAN14G0885 Fragaria x ananassa HOM05D005965 ORTHO05D007283 1.8e-150 536.6 442 64.0
Dinv40342 Davidia involucrata HOM05D005965 ORTHO05D007283 9.1e-150 534.3 344 77.3
HanXRQChr03g0072661 Helianthus annuus HOM05D005965 ORTHO05D007283 1.2e-149 533.9 470 62.8
PGR031G2641 Punica granatum HOM05D005965 ORTHO05D007283 1.5e-149 533.5 446 62.3
Sed0024378 Sechium edule HOM05D005965 ORTHO05D007283 2.0e-149 533.1 451 62.3
TAR362G0609 Trochodendron aralioides HOM05D005965 ORTHO05D007283 2.2e-148 529.6 451 62.3
CAN.G1.32 Capsicum annuum HOM05D005965 ORTHO05D007283 2.9e-148 529.3 446 64.1
Lj1g0019406 Lotus japonicus HOM05D005965 ORTHO05D007283 6.5e-148 528.1 449 61.0
Gohir.A11G267700 Gossypium hirsutum HOM05D005965 ORTHO05D007283 8.5e-148 527.7 449 63.5
Nitab4.5_0001129g0130 Nicotiana tabacum HOM05D005965 ORTHO05D007283 1.4e-147 526.9 461 64.0
THA.LOC104818713 Tarenaya hassleriana HOM05D005965 ORTHO05D007283 1.4e-147 526.9 450 61.3
ClCG02G015450 Citrullus lanatus HOM05D005965 ORTHO05D007283 1.2e-146 523.9 447 62.9
Eucgr.H04531 Eucalyptus grandis HOM05D005965 ORTHO05D007283 1.6e-146 523.5 448 62.3
Lsat_1_v5_gn_9_124801 Lactuca sativa HOM05D005965 ORTHO05D007283 2.3e-145 519.6 457 60.8
Lj9A144T46 Lonicera japonica HOM05D005965 ORTHO05D007283 5.1e-145 518.5 343 75.5
TPR.G33209 Trifolium pratense HOM05D005965 ORTHO05D007283 6.7e-145 518.1 449 60.4
Medtr7g113100 Medicago truncatula HOM05D005965 ORTHO05D007283 8.8e-145 517.7 448 60.3
Hma1.2p1_1292F.1_g273670 Hydrangea macrophylla HOM05D005965 ORTHO05D007283 2.0e-144 516.5 341 76.5
CsaV3_2G006620 Cucumis sativus L. HOM05D005965 ORTHO05D007283 3.3e-144 515.8 454 62.3
RcHm_v2.0_Chr3g0455661 Rosa chinensis HOM05D005965 ORTHO05D007283 7.4e-144 514.6 445 62.7
vmacro19747 Vaccinium macrocarpon HOM05D005965 ORTHO05D007283 7.4e-144 514.6 412 65.8
FAN02G0246 Fragaria x ananassa HOM05D005965 ORTHO05D007283 9.7e-144 514.2 448 61.6
PSO151G0070 Papaver somniferum HOM05D005965 ORTHO05D007283 1.7e-143 513.5 450 60.4
Lalb_Chr18g0045721 Lupinus albus HOM05D005965 ORTHO05D007283 2.2e-143 513.1 448 58.7
Psat0s4314g0040 Pisum sativum HOM05D005965 ORTHO05D007283 4.8e-143 511.9 472 57.8
Aqoxy2G02987 Aquilegia oxysepala HOM05D005965 ORTHO05D007283 1.1e-142 510.8 450 59.8
COL.COLO4_10514 Corchorus olitorius HOM05D005965 ORTHO05D007283 2.4e-142 509.6 381 69.0
VMungo0540G0496 Vigna mungo HOM05D005965 ORTHO05D007283 4.1e-142 508.8 450 60.0
arahy.Tifrunner.gnm1.ann1.DHC6FB Arachis hypogaea HOM05D005965 ORTHO05D007283 1.2e-141 507.3 433 61.9
Glyma.19G233800 Glycine max HOM05D005965 ORTHO05D007283 1.2e-141 507.3 449 59.7
arahy.Tifrunner.gnm1.ann1.79NSX3 Arachis hypogaea HOM05D005965 ORTHO05D007283 1.5e-141 506.9 433 61.9
EL10Ac4g09921 Beta vulgaris HOM05D005965 ORTHO05D007283 2.0e-141 506.5 447 58.8
Hund07094 Selenicereus undatus HOM05D005965 ORTHO05D007283 2.0e-141 506.5 457 59.3
Thhalv10020753m.g Eutrema salsugineum HOM05D005965 ORTHO05D007283 2.2e-140 503.1 449 59.7
Nn3g21434 Nelumbo nucifera HOM05D005965 ORTHO05D007283 2.9e-140 502.7 450 59.6
Carub.0003s0477 Capsella rubella HOM05D005965 ORTHO05D007283 5.0e-140 501.9 448 60.0
AT3G05480 Arabidopsis thaliana HOM05D005965 ORTHO05D007283 6.5e-140 501.5 455 59.6
FvH4_6g06510 Fragaria vesca HOM05D005965 ORTHO05D007283 1.9e-139 500.0 370 68.6
AL3G16080 Arabidopsis lyrata HOM05D005965 ORTHO05D007283 4.2e-139 498.8 454 59.3
Phvul.006G090000 Phaseolus vulgaris HOM05D005965 ORTHO05D007283 4.2e-139 498.8 450 59.6
FAN05G3147 Fragaria x ananassa HOM05D005965 ORTHO05D007283 5.5e-139 498.4 370 68.4
Sp3g04310 Schrenkiella parvula HOM05D005965 ORTHO05D007283 7.2e-139 498.0 451 59.2
Ah.04g161100 Amaranthus hybridus HOM05D005965 ORTHO05D007283 1.2e-138 497.3 448 60.0
C05p61750 Brassica napus HOM05D005965 ORTHO05D007283 2.1e-138 496.5 454 59.0
BcaC05g30118 Brassica carinata HOM05D005965 ORTHO05D007283 2.7e-138 496.1 454 58.4
Glyma.03G236100 Glycine max HOM05D005965 ORTHO05D007283 5.2e-137 491.9 448 58.3
Aa31LG5G15920 Aethionema arabicum HOM05D005965 ORTHO05D007283 5.7e-136 488.4 496 54.4
BcaC05g30164 Brassica carinata HOM05D005965 ORTHO05D007283 2.2e-135 486.5 478 56.5
BolC5t34833H Brassica oleracea HOM05D005965 ORTHO05D007283 2.4e-134 483.0 469 57.1
Ca_05803_v3 Cicer arietinum L. HOM05D005965 ORTHO05D007283 2.4e-134 483.0 401 62.3
MBI19_g29225_MAGBIO Magnolia biondii HOM05D005965 ORTHO05D007283 5.3e-134 481.9 462 56.9
Hma1.2p1_1292F.1_g273680 Hydrangea macrophylla HOM05D005965 ORTHO05D007283 1.3e-132 477.2 336 73.8
Eucgr.H04558 Eucalyptus grandis HOM05D005965 ORTHO05D007283 4.0e-129 465.7 376 63.6
AUR62000770 Chenopodium quinoa HOM05D005965 ORTHO05D007283 1.5e-128 463.8 396 62.1
HPP92_000403 Vanilla planifolia HOM05D005965 ORTHO05D007283 6.5e-124 448.4 453 55.0
HPP92_000400 Vanilla planifolia HOM05D005965 ORTHO05D007283 1.1e-123 447.6 459 54.7
ATR0796G244 Amborella trichopoda HOM05D005965 ORTHO05D007283 7.2e-123 444.9 459 53.2
SHI18108 Sapria himalayana HOM05D005965 ORTHO05D007283 1.2e-117 427.6 301 72.1
Haze_04145 Corylus avellana HOM05D005965 ORTHO05D007283 5.9e-117 425.2 255 79.6
Thecc.05G312500 Theobroma cacao HOM05D005965 ORTHO05D007283 7.2e-115 418.3 370 61.1
SEGI_33282 Sequoiadendron giganteum HOM05D005965 ORTHO05D007283 4.4e-112 409.1 474 47.5
AUR62005199 Chenopodium quinoa HOM05D005965 ORTHO05D007283 1.7e-108 397.1 378 55.0
Eucgr.H04576 Eucalyptus grandis HOM05D005965 ORTHO05D007283 2.9e-108 396.4 253 73.9
CARHR079860 Cardamine hirsuta HOM05D005965 ORTHO05D007283 5.0e-108 395.6 255 71.8
Os03g0345100 Oryza sativa ssp. japonica HOM05D005965 ORTHO05D007283 1.1e-107 394.4 459 48.8
MELO3C031536.2 Cucumis melo HOM05D005965 ORTHO05D007283 6.1e-106 388.7 362 58.8
BraA05t23035Z Brassica rapa HOM05D005965 ORTHO05D007283 7.0e-102 375.2 364 56.0
CDE02G1352 Ceratophyllum demersum HOM05D005965 ORTHO05D007283 4.6e-101 372.5 388 52.8
Eucgr.H04573 Eucalyptus grandis HOM05D005965 ORTHO05D007283 3.9e-100 369.4 257 70.0
Nitab4.5_0001057g0090 Nicotiana tabacum HOM05D005965 ORTHO05D007283 1.4e-97 360.9 379 55.7
Mapoly0078s0014 Marchantia polymorpha HOM05D005965 ORTHO05D007283 5.8e-96 355.5 452 46.0
Eucgr.H04556 Eucalyptus grandis HOM05D005965 ORTHO05D007283 2.9e-95 353.2 308 61.4
Pp3c7_570 Physcomitrium patens HOM05D005965 ORTHO05D007283 3.2e-94 349.7 369 49.1
SMO134G0282 Selaginella moellendorffii HOM05D005965 ORTHO05D007283 6.0e-93 345.5 344 52.0
Pp3c15_2650 Physcomitrium patens HOM05D005965 ORTHO05D007283 2.3e-92 343.6 366 48.1
BraA05t19070Z Brassica rapa HOM05D005965 ORTHO05D007283 2.1e-90 337.0 242 66.9
SHI32441 Sapria himalayana HOM05D005965 ORTHO05D007283 1.5e-88 330.9 298 62.1
CBR_g180 Chara braunii HOM05D005965 ORTHO05D007283 3.1e-81 306.6 403 42.7
Zm00001eb016590 Zea mays HOM05D005965 ORTHO05D007283 2.5e-75 287.0 337 49.6
Eucgr.H04569 Eucalyptus grandis HOM05D005965 ORTHO05D007283 2.1e-66 257.3 449 40.3
Eucgr.H04571 Eucalyptus grandis HOM05D005965 ORTHO05D007283 5.6e-59 232.6 451 37.9
Thecc.07G184800 Theobroma cacao HOM05D005965 ORTHO05D007283 3.0e-52 210.3 234 51.7
AL3G16050 Arabidopsis lyrata HOM05D005965 ORTHO05D007283 5.1e-52 209.5 254 45.7
Psat6g098120 Pisum sativum HOM05D005965 ORTHO05D007283 1.3e-47 194.9 164 57.9
Thhalv10022144m.g Eutrema salsugineum HOM05D005965 ORTHO05D007283 7.4e-43 179.1 326 39.6
QL03p021253 Quercus lobata HOM05D005965 ORTHO05D007283 1.3e-34 151.8 93 76.3
PSO017G4250 Papaver somniferum HOM05D005965 ORTHO05D007283 4.1e-33 146.7 122 60.7
MCO01G074 Micromonas commoda HOM05D005965 ORTHO05D007283 2.0e-32 144.4 306 33.0
Thecc.07G184700 Theobroma cacao HOM05D005965 ORTHO05D007283 1.4e-28 131.7 198 47.0
TAR633G2454 Trochodendron aralioides HOM05D005965 ORTHO05D007283 1.1e-27 128.6 134 53.0
Cre16.g682950 Chlamydomonas reinhardtii HOM05D005965 ORTHO05D007283 3.5e-24 117.1 201 35.8
DCAR_023086 Daucus carota HOM05D007620 ORTHO05D009568 1.3e-23 115.2 60 80.0
Eucgr.H04575 Eucalyptus grandis HOM05D005965 ORTHO05D007283 1.7e-23 114.8 125 48.8
CARHR079870 Cardamine hirsuta HOM05D005965 ORTHO05D007283 1.5e-19 101.7 194 39.7
Haze_04144 Corylus avellana HOM05D005965 ORTHO05D007283 1.3e-18 98.6 126 50.8
TWI56G1489 Tripterygium wilfordii HOM05D005965 ORTHO05D007283 3.8e-15 87.0 73 63.0
Nitab4.5_0000524g0030 Nicotiana tabacum HOM05D005965 ORTHO05D007283 1.9e-14 84.7 201 33.8


User provided reference genes

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