Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G00984 Erythranthe guttata HOM05D004951 ORTHO05D005840 2.3e-111 405.6 204 100.0
Migut.C00815 Erythranthe guttata HOM05D004951 ORTHO05D005840 9.2e-105 383.6 204 93.6
MSTRG.1208 Avicennia marina HOM05D004951 ORTHO05D005840 2.9e-82 308.9 198 76.3
Oeu024529.1 Olea europaea HOM05D004951 ORTHO05D005840 1.5e-78 296.6 203 71.9
SalBow8G2430 Salvia bowleyana HOM05D004951 ORTHO05D005840 4.7e-77 291.6 199 72.4
SGA_v2.0_scaffold11G05895 Striga asiatica HOM05D004951 ORTHO05D005840 3.1e-76 288.9 199 70.9
Oeu056857.1 Olea europaea HOM05D004951 ORTHO05D005840 6.8e-76 287.7 192 72.9
Dinv39502 Davidia involucrata HOM05D004951 ORTHO05D005840 5.4e-65 251.5 194 62.4
Actinidia15407 Actinidia chinensis HOM05D004951 ORTHO05D005840 2.1e-64 249.6 194 63.4
CSS0031211 Camellia sinensis var. sinensis HOM05D004951 ORTHO05D005840 6.0e-64 248.1 198 62.1
vmacro14381 Vaccinium macrocarpon HOM05D004951 ORTHO05D005840 6.0e-64 248.1 194 61.3
Cc10_g01890 Coffea canephora HOM05D004951 ORTHO05D005840 1.0e-63 247.3 194 60.3
vmacro21713 Vaccinium macrocarpon HOM05D004951 ORTHO05D005840 8.7e-63 244.2 194 60.8
Nitab4.5_0001242g0070 Nicotiana tabacum HOM05D004951 ORTHO05D005840 1.5e-62 243.4 193 60.1
Solyc05g054140.3 Solanum lycopersicum HOM05D004951 ORTHO05D005840 3.3e-62 242.3 192 62.0
PGSC0003DMG400008458 Solanum tuberosum HOM05D004951 ORTHO05D005840 3.3e-62 242.3 192 62.5
Hma1.2p1_0638F.1_g193670 Hydrangea macrophylla HOM05D004951 ORTHO05D005840 5.6e-62 241.5 198 61.1
Sopen05g032630 Solanum pennellii HOM05D004951 ORTHO05D005840 7.4e-62 241.1 192 61.5
THA.LOC104809415 Tarenaya hassleriana HOM05D004951 ORTHO05D005840 3.6e-61 238.8 199 54.8
CAN.G103.3 Capsicum annuum HOM05D004951 ORTHO05D005840 1.1e-60 237.3 192 60.4
QL02p011069 Quercus lobata HOM05D004951 ORTHO05D005840 1.4e-60 236.9 199 57.8
Actinidia37925 Actinidia chinensis HOM05D004951 ORTHO05D005840 3.1e-60 235.7 194 59.8
Rhsim06G0023300 Rhododendron simsii HOM05D004951 ORTHO05D005840 3.1e-60 235.7 198 58.6
Cfa013928 Carpinus fangiana HOM05D004951 ORTHO05D005840 5.3e-60 235.0 199 58.3
Glyma.18G246500 Glycine max HOM05D004951 ORTHO05D005840 6.9e-60 234.6 196 58.7
Atru.chr2.1521 Acer truncatum HOM05D004951 ORTHO05D005840 3.4e-59 232.3 199 58.3
Lalb_Chr03g0040521 Lupinus albus HOM05D004951 ORTHO05D005840 4.5e-59 231.9 192 58.3
Nitab4.5_0014171g0010 Nicotiana tabacum HOM05D004951 ORTHO05D005840 9.9e-59 230.7 222 53.2
GSVIVG01009867001 Vitis vinifera HOM05D004951 ORTHO05D005840 9.9e-59 230.7 194 59.3
Ca_08030_v3 Cicer arietinum L. HOM05D004951 ORTHO05D005840 1.3e-58 230.3 203 55.7
Ciclev10002352m.g Citrus clementina HOM05D004951 ORTHO05D005840 1.7e-58 229.9 199 57.3
Cpa.g.sc26.26 Carica papaya HOM05D004951 ORTHO05D005840 2.2e-58 229.6 199 53.8
Psat6g222440 Pisum sativum HOM05D004951 ORTHO05D005840 2.2e-58 229.6 203 54.7
Lsat_1_v5_gn_8_80440 Lactuca sativa HOM05D004951 ORTHO05D005840 3.8e-58 228.8 197 56.9
COL.COLO4_26170 Corchorus olitorius HOM05D004951 ORTHO05D005840 6.4e-58 228.0 195 55.9
ClCG11G002570 Citrullus lanatus HOM05D004951 ORTHO05D005840 1.1e-57 227.3 199 54.3
COL.COLO4_20267 Corchorus olitorius HOM05D004951 ORTHO05D005840 1.1e-57 227.3 195 56.4
Phvul.008G050600 Phaseolus vulgaris HOM05D004951 ORTHO05D005840 1.1e-57 227.3 194 57.7
PGR031G1064 Punica granatum HOM05D004951 ORTHO05D005840 1.9e-57 226.5 191 58.6
HanXRQChr02g0039471 Helianthus annuus HOM05D004951 ORTHO05D005840 3.2e-57 225.7 194 57.7
HanXRQChr10g0300951 Helianthus annuus HOM05D004951 ORTHO05D005840 3.2e-57 225.7 191 58.6
CiPaw.08G064600 Carya illinoinensis HOM05D004951 ORTHO05D005840 5.5e-57 224.9 201 54.2
Glyma.09G246500 Glycine max HOM05D004951 ORTHO05D005840 7.1e-57 224.6 181 60.2
Gohir.A09G014000 Gossypium hirsutum HOM05D004951 ORTHO05D005840 9.3e-57 224.2 203 53.2
Gohir.D02G097900 Gossypium hirsutum HOM05D004951 ORTHO05D005840 9.3e-57 224.2 203 53.2
TAR381G0914 Trochodendron aralioides HOM05D004951 ORTHO05D005840 9.3e-57 224.2 197 56.3
Gorai.005G111600 Gossypium raimondii HOM05D004951 ORTHO05D005840 1.2e-56 223.8 203 53.2
Lj1g0015493 Lotus japonicus HOM05D004951 ORTHO05D005840 1.2e-56 223.8 212 53.3
Manes.05G149800 Manihot esculenta HOM05D004951 ORTHO05D005840 1.2e-56 223.8 199 57.8
Peaxi162Scf00186g00023 Petunia axillaris HOM05D004951 ORTHO05D005840 2.1e-56 223.0 214 52.8
VMungo1383G3289 Vigna mungo HOM05D004951 ORTHO05D005840 2.7e-56 222.6 194 55.7
Gohir.A07G207200 Gossypium hirsutum HOM05D004951 ORTHO05D005840 4.6e-56 221.9 195 53.8
Carub.0002s2250 Capsella rubella HOM05D004951 ORTHO05D005840 1.0e-55 220.7 194 53.1
CANSAT78G0251 Cannabis sativa HOM05D004951 ORTHO05D005840 1.3e-55 220.3 202 54.5
ClCG05G018480 Citrullus lanatus HOM05D004951 ORTHO05D005840 1.3e-55 220.3 180 56.7
Eucgr.E00855 Eucalyptus grandis HOM05D004951 ORTHO05D005840 1.3e-55 220.3 197 56.3
ECA236G4786 Erigeron canadensis HOM05D004951 ORTHO05D005840 1.8e-55 219.9 192 56.2
Duzib116G0591 Durio zibethinus HOM05D004951 ORTHO05D005840 2.3e-55 219.5 195 53.8
Sed0001853 Sechium edule HOM05D004951 ORTHO05D005840 8.7e-55 217.6 201 51.2
TWI56G1488 Tripterygium wilfordii HOM05D004951 ORTHO05D005840 1.1e-54 217.2 201 54.7
PSO541G0679 Papaver somniferum HOM05D004951 ORTHO05D005840 1.5e-54 216.9 194 55.2
PSO675G7262 Papaver somniferum HOM05D004951 ORTHO05D005840 1.5e-54 216.9 192 56.2
CsaV3_3G045700 Cucumis sativus L. HOM05D004951 ORTHO05D005840 2.5e-54 216.1 202 52.5
PSO675G8856 Papaver somniferum HOM05D004951 ORTHO05D005840 4.3e-54 215.3 194 54.6
AL2G35650 Arabidopsis lyrata HOM05D004951 ORTHO05D005840 5.6e-54 214.9 194 49.5
TWI34G1799 Tripterygium wilfordii HOM05D004951 ORTHO05D005840 7.4e-54 214.5 202 52.5
arahy.Tifrunner.gnm1.ann1.5C4441 Arachis hypogaea HOM05D004951 ORTHO05D005840 9.6e-54 214.2 196 56.1
CARHR069060 Cardamine hirsuta HOM05D004951 ORTHO05D005840 9.6e-54 214.2 194 49.5
Gohir.A07G207300 Gossypium hirsutum HOM05D004951 ORTHO05D005840 9.6e-54 214.2 195 52.3
TPR.G15148 Trifolium pratense HOM05D004951 ORTHO05D005840 1.3e-53 213.8 195 54.4
MD10G1149500 Malus domestica HOM05D004951 ORTHO05D005840 1.6e-53 213.4 201 51.2
Nn5g29279 Nelumbo nucifera HOM05D004951 ORTHO05D005840 2.1e-53 213.0 197 52.3
Sabra05G0183100 Salix brachista HOM05D004951 ORTHO05D005840 2.1e-53 213.0 198 53.0
Thecc.08G041400 Theobroma cacao HOM05D004951 ORTHO05D005840 2.1e-53 213.0 194 52.6
AT1G75670 Arabidopsis thaliana HOM05D004951 ORTHO05D005840 3.7e-53 212.2 194 49.0
Aa31LG4G5890 Aethionema arabicum HOM05D004951 ORTHO05D005840 4.8e-53 211.8 194 52.6
PGR031G3408 Punica granatum HOM05D004951 ORTHO05D005840 6.2e-53 211.5 187 56.7
Sp5g30770 Schrenkiella parvula HOM05D004951 ORTHO05D005840 6.2e-53 211.5 194 51.0
arahy.Tifrunner.gnm1.ann1.T7R5G6 Arachis hypogaea HOM05D004951 ORTHO05D005840 8.1e-53 211.1 200 56.0
Thhalv10019169m.g Eutrema salsugineum HOM05D004951 ORTHO05D005840 8.1e-53 211.1 194 51.5
Oeu024522.1 Olea europaea HOM05D004951 ORTHO05D005840 1.1e-52 210.7 151 72.2
Potri.005G236800 Populus trichocarpa HOM05D004951 ORTHO05D005840 1.4e-52 210.3 210 51.0
Actinidia28598 Actinidia chinensis HOM05D004951 ORTHO05D005840 3.1e-52 209.1 198 54.0
BcaC03g15607 Brassica carinata HOM05D004951 ORTHO05D005840 3.1e-52 209.1 196 49.5
BolC2t09323H Brassica oleracea HOM05D004951 ORTHO05D005840 3.1e-52 209.1 196 49.5
arahy.Tifrunner.gnm1.ann1.1I2LZG Arachis hypogaea HOM05D004951 ORTHO05D005840 6.9e-52 208.0 201 55.2
BraA02t07047Z Brassica rapa HOM05D004951 ORTHO05D005840 1.5e-51 206.8 196 49.0
C02p33810 Brassica napus HOM05D004951 ORTHO05D005840 2.6e-51 206.1 187 50.8
MD05G1155200 Malus domestica HOM05D004951 ORTHO05D005840 2.6e-51 206.1 201 49.3
A02p20120 Brassica napus HOM05D004951 ORTHO05D005840 4.5e-51 205.3 187 50.8
Potri.002G024601 Populus trichocarpa HOM05D004951 ORTHO05D005840 1.0e-50 204.1 193 52.8
unitig_8.g4914 Utricularia gibba HOM05D004951 ORTHO05D005840 1.0e-50 204.1 206 49.5
Sc02g0008460 Simmondsia chinensis HOM05D004951 ORTHO05D005840 2.2e-50 203.0 202 53.5
Dinv31828 Davidia involucrata HOM05D004951 ORTHO05D005840 4.9e-50 201.8 163 59.5
Eucgr.F02088 Eucalyptus grandis HOM05D004951 ORTHO05D005840 4.9e-50 201.8 195 51.8
Ah.02g126690 Amaranthus hybridus HOM05D004951 ORTHO05D005840 1.1e-49 200.7 200 51.0
EL10Ac1g02264 Beta vulgaris HOM05D004951 ORTHO05D005840 1.4e-49 200.3 199 52.3
Medtr7g080860 Medicago truncatula HOM05D004951 ORTHO05D005840 3.2e-49 199.1 201 50.7
BcaC08g47055 Brassica carinata HOM05D004951 ORTHO05D005840 4.2e-49 198.7 186 50.0
Atru.chr13.322 Acer truncatum HOM05D004951 ORTHO05D005840 5.5e-49 198.4 166 59.6
FvH4_2g17590 Fragaria vesca HOM05D004951 ORTHO05D005840 2.3e-47 193.0 201 49.8
FAN24G1417 Fragaria x ananassa HOM05D004951 ORTHO05D005840 2.3e-47 193.0 201 49.8
RcHm_v2.0_Chr6g0282531 Rosa chinensis HOM05D004951 ORTHO05D005840 3.0e-47 192.6 201 47.3
HPP92_017328 Vanilla planifolia HOM05D004951 ORTHO05D005840 3.0e-47 192.6 198 49.0
FAN15G2157 Fragaria x ananassa HOM05D004951 ORTHO05D005840 3.9e-47 192.2 201 49.8
AUR62035728 Chenopodium quinoa HOM05D004951 ORTHO05D005840 5.1e-47 191.8 178 55.1
Aqoxy3G00621 Aquilegia oxysepala HOM05D004951 ORTHO05D005840 1.1e-46 190.7 221 46.6
AUR62035440 Chenopodium quinoa HOM05D004951 ORTHO05D005840 1.5e-46 190.3 178 55.1
Prupe.8G188100 Prunus persica HOM05D004951 ORTHO05D005840 2.5e-46 189.5 201 46.8
FAN15G3167 Fragaria x ananassa HOM05D004951 ORTHO05D005840 4.3e-46 188.7 180 52.8
Sed0010580 Sechium edule HOM05D004951 ORTHO05D005840 4.3e-46 188.7 197 47.7
Nn1g08637 Nelumbo nucifera HOM05D004951 ORTHO05D005840 1.6e-45 186.8 152 59.9
FAN27G0910 Fragaria x ananassa HOM05D004951 ORTHO05D005840 2.8e-45 186.0 219 47.0
Lj4A795G31 Lonicera japonica HOM05D004951 ORTHO05D005840 4.8e-45 185.3 126 70.6
TAR625G0428 Trochodendron aralioides HOM05D004951 ORTHO05D005840 1.1e-44 184.1 162 54.3
CDE05G3598 Ceratophyllum demersum HOM05D004951 ORTHO05D005840 1.5e-43 180.3 180 49.4
DCAR_008455 Daucus carota HOM05D004951 ORTHO05D005840 2.0e-43 179.9 149 57.7
CDE12G0586 Ceratophyllum demersum HOM05D004951 ORTHO05D005840 3.4e-43 179.1 180 50.0
Haze_22610 Corylus avellana HOM05D004951 ORTHO05D005840 2.2e-42 176.4 218 46.3
BcaB05g24929 Brassica carinata HOM05D000120 ORTHO05D000068 7.9e-40 167.9 174 47.1
Lalb_Chr01g0021631 Lupinus albus HOM05D004951 ORTHO05D005840 3.0e-39 166.0 195 46.7
CAN.G230.10 Capsicum annuum HOM05D004951 ORTHO05D005840 5.1e-39 165.2 130 61.5
Gohir.A02G093500 Gossypium hirsutum HOM05D004951 ORTHO05D005840 1.5e-38 163.7 142 55.6
Os12g0533600 Oryza sativa ssp. japonica HOM05D004951 ORTHO05D005840 1.0e-34 151.0 198 39.9
Zm00001eb410680 Zea mays HOM05D004951 ORTHO05D005840 1.1e-33 147.5 207 42.0
Os06g0168400 Oryza sativa ssp. japonica HOM05D004951 ORTHO05D005840 1.9e-33 146.7 154 47.4
MBI05_g38365_MAGBIO Magnolia biondii HOM05D004951 ORTHO05D005840 2.7e-32 142.9 231 39.4
Mapoly0115s0026 Marchantia polymorpha HOM05D004951 ORTHO05D005840 1.8e-31 140.2 179 41.3
ATR0068G029 Amborella trichopoda HOM05D004951 ORTHO05D005840 5.1e-31 138.7 182 43.4
SEGI_29847 Sequoiadendron giganteum HOM05D004951 ORTHO05D005840 2.6e-30 136.3 197 39.1
Pp3c15_23380 Physcomitrium patens HOM05D004951 ORTHO05D005840 2.6e-27 126.3 199 36.2
PGSC0003DMG400019052 Solanum tuberosum HOM05D004951 ORTHO05D005840 8.5e-26 121.3 115 54.8
AagrBONN_evm.TU.Sc2ySwM_368.3390 Anthoceros agrestis HOM05D004951 ORTHO05D005840 1.4e-25 120.6 184 37.0
AagrBONN_evm.TU.Sc2ySwM_344.4244 Anthoceros agrestis HOM05D004951 ORTHO05D005840 2.5e-25 119.8 183 36.1
SMO356G0424 Selaginella moellendorffii HOM05D004951 ORTHO05D005840 2.3e-23 113.2 179 37.4
Hma1.2p1_2299F.1_g319190 Hydrangea macrophylla HOM05D004951 ORTHO05D005840 3.7e-21 105.9 76 67.1
Sed0021847 Sechium edule HOM05D004951 ORTHO05D005840 4.5e-19 99.0 162 37.0
ATR0585G020 Amborella trichopoda HOM05D004951 ORTHO05D005840 6.7e-15 85.1 88 48.9
SEGI_15858 Sequoiadendron giganteum HOM05D004951 ORTHO05D005840 5.7e-14 82.0 99 44.4
CBR_g74690 Chara braunii HOM05D004951 ORTHO05D005840 5.5e-09 65.5 137 31.4
BolC6t40000H Brassica oleracea HOM05D004951 ORTHO05D005840 2.7e-08 63.2 58 43.1
Cre02.g086750 Chlamydomonas reinhardtii HOM05D004951 ORTHO05D005840 4.7e-08 62.4 177 26.0


User provided reference genes

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