Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G00969 Erythranthe guttata HOM05D003443 ORTHO05D008640 3.0e-51 204.9 105 100.0
Migut.C01148 Erythranthe guttata HOM05D003443 ORTHO05D008640 9.1e-40 166.8 131 73.3
SGA_v2.0_scaffold52G18981 Striga asiatica HOM05D003443 ORTHO05D008640 7.2e-29 130.6 122 61.5
MSTRG.1460 Avicennia marina HOM05D003443 ORTHO05D008640 5.7e-26 120.9 126 56.3
SalBow7G4791 Salvia bowleyana HOM05D003443 ORTHO05D008640 1.3e-25 119.8 121 58.7
SalBow7G2413 Salvia bowleyana HOM05D003443 ORTHO05D008640 7.0e-24 114.0 122 57.4
CAN.G513.1 Capsicum annuum HOM05D003443 ORTHO05D008640 1.2e-20 103.2 126 50.0
MD03G1200300 Malus domestica HOM05D003443 ORTHO05D008640 6.8e-19 97.4 131 46.6
Actinidia02607 Actinidia chinensis HOM05D003443 ORTHO05D008640 8.8e-19 97.1 139 43.9
Prupe.1G501600 Prunus persica HOM05D003443 ORTHO05D008640 8.8e-19 97.1 127 49.6
Duzib093G0610 Durio zibethinus HOM05D003443 ORTHO05D008640 2.0e-18 95.9 114 52.6
MD15G1353300 Malus domestica HOM05D003443 ORTHO05D008640 2.0e-18 95.9 131 45.8
Nitab4.5_0001926g0050 Nicotiana tabacum HOM05D003443 ORTHO05D008640 2.0e-18 95.9 130 48.5
Peaxi162Scf00198g00098 Petunia axillaris HOM05D003443 ORTHO05D008640 2.0e-18 95.9 129 46.5
Solyc11g013020.2 Solanum lycopersicum HOM05D003443 ORTHO05D008640 2.0e-18 95.9 128 47.7
FAN24G2127 Fragaria x ananassa HOM05D003443 ORTHO05D008640 2.6e-18 95.5 126 46.0
Nitab4.5_0002883g0010 Nicotiana tabacum HOM05D003443 ORTHO05D008640 3.4e-18 95.1 130 47.7
FvH4_2g26530 Fragaria vesca HOM05D003443 ORTHO05D008640 4.4e-18 94.7 126 46.0
Gorai.009G244100 Gossypium raimondii HOM05D003443 ORTHO05D008640 7.5e-18 94.0 132 46.2
RcHm_v2.0_Chr6g0295401 Rosa chinensis HOM05D003443 ORTHO05D008640 7.5e-18 94.0 126 43.7
Actinidia23064 Actinidia chinensis HOM05D003443 ORTHO05D008640 9.8e-18 93.6 135 43.0
Peaxi162Scf00395g00717 Petunia axillaris HOM05D003443 ORTHO05D008640 1.3e-17 93.2 129 45.0
Manes.18G075200 Manihot esculenta HOM05D003443 ORTHO05D008640 1.7e-17 92.8 137 44.5
Gohir.D05G235800 Gossypium hirsutum HOM05D003443 ORTHO05D008640 2.2e-17 92.4 132 45.5
PGSC0003DMG400000906 Solanum tuberosum HOM05D003443 ORTHO05D008640 2.2e-17 92.4 128 46.9
VMungo0647G0179 Vigna mungo HOM05D003443 ORTHO05D008640 2.2e-17 92.4 123 47.2
CiPaw.05G224500 Carya illinoinensis HOM05D003443 ORTHO05D008640 3.7e-17 91.7 133 45.1
Gohir.A05G233400 Gossypium hirsutum HOM05D003443 ORTHO05D008640 3.7e-17 91.7 132 44.7
Sopen11g007760 Solanum pennellii HOM05D003443 ORTHO05D008640 3.7e-17 91.7 128 46.9
FAN15G0021 Fragaria x ananassa HOM05D003443 ORTHO05D008640 6.3e-17 90.9 126 43.7
Thecc.08G121300 Theobroma cacao HOM05D003443 ORTHO05D008640 1.4e-16 89.7 133 47.4
Cc10_g11000 Coffea canephora HOM05D003443 ORTHO05D008640 1.8e-16 89.4 133 45.1
arahy.Tifrunner.gnm1.ann1.ZIXY5S Arachis hypogaea HOM05D003443 ORTHO05D008640 2.4e-16 89.0 134 43.3
arahy.Tifrunner.gnm1.ann1.B00VWE Arachis hypogaea HOM05D003443 ORTHO05D008640 3.1e-16 88.6 134 44.0
Ciclev10002759m.g Citrus clementina HOM05D003443 ORTHO05D008640 3.1e-16 88.6 128 47.7
DCAR_014106 Daucus carota HOM05D003443 ORTHO05D008640 7.0e-16 87.4 142 38.7
QL08p024382 Quercus lobata HOM05D003443 ORTHO05D008640 7.0e-16 87.4 127 45.7
Dinv40389 Davidia involucrata HOM05D003443 ORTHO05D008640 9.1e-16 87.0 140 45.0
FAN27G2419 Fragaria x ananassa HOM05D003443 ORTHO05D008640 9.1e-16 87.0 126 43.7
PSO170G0931 Papaver somniferum HOM05D003443 ORTHO05D008640 9.1e-16 87.0 126 46.8
Atru.chr13.1408 Acer truncatum HOM05D003443 ORTHO05D008640 1.2e-15 86.7 131 44.3
Glyma.14G162600 Glycine max HOM05D003443 ORTHO05D008640 1.2e-15 86.7 125 43.2
Haze_00480 Corylus avellana HOM05D003443 ORTHO05D008640 1.6e-15 86.3 129 43.4
vmacro12548 Vaccinium macrocarpon HOM05D003443 ORTHO05D008640 1.6e-15 86.3 142 41.5
GSVIVG01008902001 Vitis vinifera HOM05D003443 ORTHO05D008640 1.6e-15 86.3 136 42.6
CSS0034050 Camellia sinensis var. sinensis HOM05D003443 ORTHO05D008640 2.0e-15 85.9 141 41.8
Oeu047933.1 Olea europaea HOM05D003443 ORTHO05D008640 2.0e-15 85.9 144 41.7
Cpa.g.sc70.11 Carica papaya HOM05D003443 ORTHO05D008640 2.7e-15 85.5 129 46.5
Cfa015987 Carpinus fangiana HOM05D003443 ORTHO05D009887 2.7e-15 85.5 129 45.0
Hma1.2p1_0073F.1_g038390 Hydrangea macrophylla HOM05D003443 ORTHO05D008640 2.7e-15 85.5 123 43.9
Sabra02G0067600 Salix brachista HOM05D003443 ORTHO05D008640 3.5e-15 85.1 132 44.7
CANSAT25G1680 Cannabis sativa HOM05D003443 ORTHO05D008640 7.7e-15 84.0 123 44.7
Psat2g087720 Pisum sativum HOM05D003443 ORTHO05D008640 7.7e-15 84.0 126 45.2
Potri.002G086200 Populus trichocarpa HOM05D003443 ORTHO05D008640 1.0e-14 83.6 134 44.8
Ca_26970_v3 Cicer arietinum L. HOM05D003443 ORTHO05D008640 1.3e-14 83.2 126 44.4
Sc01g0001350 Simmondsia chinensis HOM05D003443 ORTHO05D008640 2.2e-14 82.4 131 38.2
Lj1g0013808 Lotus japonicus HOM05D003443 ORTHO05D008640 3.8e-14 81.6 148 40.5
AL6G41970 Arabidopsis lyrata HOM05D003443 ORTHO05D008640 6.5e-14 80.9 128 39.8
Medtr5g058660 Medicago truncatula HOM05D003443 ORTHO05D008640 6.5e-14 80.9 119 45.4
Medtr5g059030 Medicago truncatula HOM05D003443 ORTHO05D008640 6.5e-14 80.9 119 45.4
Nn4g26023 Nelumbo nucifera HOM05D003443 ORTHO05D008640 8.5e-14 80.5 126 45.2
AT4G08240 Arabidopsis thaliana HOM05D003443 ORTHO05D008640 1.1e-13 80.1 128 39.8
MBI06_g44272_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D008640 1.1e-13 80.1 127 40.9
MBI15_g35999_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D008640 1.1e-13 80.1 127 40.9
Rhsim06G0105400 Rhododendron simsii HOM05D003443 ORTHO05D008640 1.1e-13 80.1 141 41.1
Lalb_Chr10g0101911 Lupinus albus HOM05D003443 ORTHO05D008640 1.5e-13 79.7 122 43.4
BcaB01g02870 Brassica carinata HOM05D003443 ORTHO05D008640 1.9e-13 79.3 129 41.1
THA.LOC104817138 Tarenaya hassleriana HOM05D003443 ORTHO05D008640 2.5e-13 79.0 127 40.9
Carub.0006s2677 Capsella rubella HOM05D003443 ORTHO05D008640 7.2e-13 77.4 128 39.8
AUR62004720 Chenopodium quinoa HOM05D003443 ORTHO05D008640 7.2e-13 77.4 130 40.0
CARHR259340 Cardamine hirsuta HOM05D003443 ORTHO05D008640 1.2e-12 76.6 128 39.8
AUR62023639 Chenopodium quinoa HOM05D003443 ORTHO05D008640 2.7e-12 75.5 102 43.1
unitig_747.g21488 Utricularia gibba HOM05D003443 ORTHO05D008640 2.7e-12 75.5 119 42.9
Phvul.008G165400 Phaseolus vulgaris HOM05D003443 ORTHO05D008640 6.1e-12 74.3 100 47.0
Thhalv10029053m.g Eutrema salsugineum HOM05D003443 ORTHO05D008640 1.0e-11 73.6 124 41.9
Sp6g09810 Schrenkiella parvula HOM05D003443 ORTHO05D008640 1.0e-11 73.6 130 39.2
Sed0028054 Sechium edule HOM05D003443 ORTHO05D008640 1.4e-11 73.2 130 40.0
Aa31LG9G14320 Aethionema arabicum HOM05D003443 ORTHO05D008640 1.8e-11 72.8 121 41.3
SHI33895 Sapria himalayana HOM05D003443 ORTHO05D008640 1.8e-11 72.8 95 41.1
BraA03t12014Z Brassica rapa HOM05D003443 ORTHO05D008640 3.0e-11 72.0 129 39.5
Aqoxy6G00163 Aquilegia oxysepala HOM05D003443 ORTHO05D008640 4.0e-11 71.6 139 38.1
MD08G1167900 Malus domestica HOM05D003443 ORTHO05D008640 4.0e-11 71.6 134 38.8
HanXRQChr09g0254131 Helianthus annuus HOM05D003443 ORTHO05D008640 6.8e-11 70.9 121 39.7
PGR044G0044 Punica granatum HOM05D003443 ORTHO05D008640 2.6e-10 68.9 107 43.0
ECA232G0443 Erigeron canadensis HOM05D003443 ORTHO05D008640 3.4e-10 68.6 127 37.8
A03p27990 Brassica napus HOM05D003443 ORTHO05D008640 7.5e-10 67.4 129 38.8
CsaV3_6G003590 Cucumis sativus L. HOM05D003443 ORTHO05D008640 9.8e-10 67.0 136 37.5
BcaC01g04776 Brassica carinata HOM05D003443 ORTHO05D008640 1.7e-09 66.2 125 37.6
C03p33840 Brassica napus HOM05D003443 ORTHO05D008640 1.7e-09 66.2 125 37.6
BolC3t15700H Brassica oleracea HOM05D003443 ORTHO05D008640 1.7e-09 66.2 125 37.6
MELO3C011587.2 Cucumis melo HOM05D003443 ORTHO05D008640 1.7e-09 66.2 136 36.8
HPP92_002301 Vanilla planifolia HOM05D003443 ORTHO05D008640 3.7e-09 65.1 123 35.8
Lsat_1_v5_gn_4_136221 Lactuca sativa HOM05D003443 ORTHO05D008640 4.9e-09 64.7 130 35.4
MELO3C011304.2 Cucumis melo HOM05D003443 ORTHO05D008640 5.4e-08 61.2 146 34.2
Hund27039 Selenicereus undatus HOM05D003443 ORTHO05D008640 4.5e-07 58.2 206 26.7
CDE08G0113 Ceratophyllum demersum HOM05D003443 ORTHO05D008640 5.9e-07 57.8 108 38.0
TAR628G1666 Trochodendron aralioides HOM05D003443 ORTHO05D008640 1.0e-06 57.0 51 62.7
ATR0121G005 Amborella trichopoda HOM05D003443 ORTHO05D008640 2.9e-06 55.5 122 35.2
Os02g0567000 Oryza sativa ssp. japonica HOM05D003443 ORTHO05D008640 3.8e-06 55.1 135 33.3
TWI12G0841 Tripterygium wilfordii HOM05D003443 ORTHO05D008640 3.8e-06 55.1 52 57.7
CDE06G0537 Ceratophyllum demersum HOM05D003443 ORTHO05D008640 5.0e-06 54.7 108 36.1


User provided reference genes

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