Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G00953 Erythranthe guttata HOM05D005651 ORTHO05D006877 0.0e+00 2432.9 1245 100.0
SGA_v2.0_scaffold12G06118 Striga asiatica HOM05D005651 ORTHO05D006877 0.0e+00 1662.9 1285 67.5
SalBow1G5228 Salvia bowleyana HOM05D005651 ORTHO05D006877 0.0e+00 1624.0 1300 65.5
SalBow1G5941 Salvia bowleyana HOM05D005651 ORTHO05D006877 0.0e+00 1614.7 1300 65.2
Oeu050724.1 Olea europaea HOM05D005651 ORTHO05D006877 0.0e+00 1382.1 1111 65.5
Actinidia13837 Actinidia chinensis HOM05D005651 ORTHO05D006877 0.0e+00 1338.9 1283 55.4
Cc03_g09140 Coffea canephora HOM05D005651 ORTHO05D006877 0.0e+00 1335.9 1291 54.5
TAR362G0451 Trochodendron aralioides HOM05D005651 ORTHO05D006877 0.0e+00 1284.2 1282 53.3
Peaxi162Scf00017g02338 Petunia axillaris HOM05D005651 ORTHO05D006877 0.0e+00 1273.1 1289 53.1
Sopen03g033090 Solanum pennellii HOM05D005651 ORTHO05D006877 0.0e+00 1270.8 1294 53.3
GSVIVG01031569001 Vitis vinifera HOM05D005651 ORTHO05D006877 0.0e+00 1263.1 1289 52.8
Solyc03g114040.3 Solanum lycopersicum HOM05D005651 ORTHO05D006877 0.0e+00 1258.4 1340 51.4
HanXRQChr14g0436391 Helianthus annuus HOM05D005651 ORTHO05D006877 0.0e+00 1257.7 1276 52.5
RcHm_v2.0_Chr4g0412451 Rosa chinensis HOM05D005651 ORTHO05D006877 0.0e+00 1237.6 1290 51.2
Lj3C272T4 Lonicera japonica HOM05D005651 ORTHO05D006877 0.0e+00 1231.5 1311 53.1
Prupe.1G172400 Prunus persica HOM05D005651 ORTHO05D006877 0.0e+00 1231.1 1286 52.6
RcHm_v2.0_Chr4g0412511 Rosa chinensis HOM05D005651 ORTHO05D006877 0.0e+00 1228.4 1290 51.0
FAN12G2514 Fragaria x ananassa HOM05D005651 ORTHO05D006877 0.0e+00 1214.1 1290 50.5
FvH4_4g12860 Fragaria vesca HOM05D005651 ORTHO05D006877 0.0e+00 1210.7 1287 50.7
Rhsim02G0090700 Rhododendron simsii HOM05D005651 ORTHO05D006877 0.0e+00 1199.9 1113 56.6
Haze_11684 Corylus avellana HOM05D005651 ORTHO05D006877 0.0e+00 1193.3 1403 47.5
FAN17G0433 Fragaria x ananassa HOM05D005651 ORTHO05D006877 0.0e+00 1191.8 1290 50.3
MD04G1022200 Malus domestica HOM05D005651 ORTHO05D006877 0.0e+00 1191.0 1322 50.1
QL06p027298 Quercus lobata HOM05D005651 ORTHO05D006877 0.0e+00 1185.6 1295 50.5
Thecc.04G191000 Theobroma cacao HOM05D005651 ORTHO05D006877 0.0e+00 1182.9 1281 49.7
Lsat_1_v5_gn_2_47921 Lactuca sativa HOM05D005651 ORTHO05D006877 0.0e+00 1174.1 1305 48.9
Nitab4.5_0001422g0060 Nicotiana tabacum HOM05D005651 ORTHO05D006877 0.0e+00 1173.3 1310 50.2
CAN.G781.41 Capsicum annuum HOM05D005651 ORTHO05D006877 0.0e+00 1169.8 1266 50.6
Gohir.A02G016900 Gossypium hirsutum HOM05D005651 ORTHO05D006877 0.0e+00 1154.8 1286 48.7
Gohir.D02G018500 Gossypium hirsutum HOM05D005651 ORTHO05D006877 0.0e+00 1154.8 1289 48.6
Cpa.g.sc157.13 Carica papaya HOM05D005651 ORTHO05D006877 0.0e+00 1153.7 1287 49.6
Gorai.005G022800 Gossypium raimondii HOM05D005651 ORTHO05D006877 0.0e+00 1151.3 1287 48.7
Ciclev10004169m.g Citrus clementina HOM05D005651 ORTHO05D006877 0.0e+00 1149.8 1285 50.0
COL.COLO4_35960 Corchorus olitorius HOM05D005651 ORTHO05D006877 0.0e+00 1149.8 1279 48.6
CANSAT78G1330 Cannabis sativa HOM05D005651 ORTHO05D006877 0.0e+00 1145.2 1281 49.6
TPR.G18109 Trifolium pratense HOM05D005651 ORTHO05D006877 0.0e+00 1140.2 1291 48.0
Lj6g0020014 Lotus japonicus HOM05D005651 ORTHO05D006877 0.0e+00 1138.3 1285 47.0
Medtr3g084640 Medicago truncatula HOM05D005651 ORTHO05D006877 0.0e+00 1134.8 1282 47.5
PGR083G1656 Punica granatum HOM05D005651 ORTHO05D006877 0.0e+00 1132.9 1284 49.2
FAN07G2778 Fragaria x ananassa HOM05D005651 ORTHO05D006877 0.0e+00 1129.8 1161 51.9
Glyma.11G253600 Glycine max HOM05D005651 ORTHO05D006877 0.0e+00 1126.7 1276 47.4
PSO063G2404 Papaver somniferum HOM05D005651 ORTHO05D006877 0.0e+00 1124.0 1276 48.8
Ca_16431_v3 Cicer arietinum L. HOM05D005651 ORTHO05D006877 0.0e+00 1122.5 1289 47.2
Aqoxy2G04074 Aquilegia oxysepala HOM05D005651 ORTHO05D006877 0.0e+00 1111.7 1298 48.0
MBI11_g07399_MAGBIO Magnolia biondii HOM05D005651 ORTHO05D006877 0.0e+00 1100.1 1315 46.9
Nn8g41263 Nelumbo nucifera HOM05D005651 ORTHO05D006877 0.0e+00 1097.4 1282 48.5
Potri.002G232700 Populus trichocarpa HOM05D005651 ORTHO05D006877 0.0e+00 1091.6 1274 47.5
Sabra02G0177500 Salix brachista HOM05D005651 ORTHO05D006877 0.0e+00 1090.5 1271 47.1
VMungo1383G2894 Vigna mungo HOM05D005651 ORTHO05D006877 0.0e+00 1089.7 1287 45.9
arahy.Tifrunner.gnm1.ann1.RD9PAU Arachis hypogaea HOM05D005651 ORTHO05D006877 0.0e+00 1080.1 1285 46.2
ClCG08G003660 Citrullus lanatus HOM05D005651 ORTHO05D006877 3.7e-310 1068.5 1289 46.9
arahy.Tifrunner.gnm1.ann1.9V91M6 Arachis hypogaea HOM05D005651 ORTHO05D006877 8.4e-310 1067.4 1286 45.6
Phvul.001G265000 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 3.2e-309 1065.4 1283 45.7
Eucgr.H02630 Eucalyptus grandis HOM05D005651 ORTHO05D006877 5.6e-306 1054.7 1293 46.1
Duzib212G0903 Durio zibethinus HOM05D005651 ORTHO05D006877 5.8e-303 1044.6 1111 51.1
Sc25g0005740 Simmondsia chinensis HOM05D005651 ORTHO05D006877 3.5e-300 1035.4 1293 45.7
Sed0004152 Sechium edule HOM05D005651 ORTHO05D006877 3.1e-296 1022.3 1280 44.8
CiPaw.01G113500 Carya illinoinensis HOM05D005651 ORTHO05D006877 1.2e-295 1020.4 1056 51.1
DCAR_026668 Daucus carota HOM05D005651 ORTHO05D006877 1.5e-295 1020.0 1294 46.2
Manes.05G198800 Manihot esculenta HOM05D005651 ORTHO05D006877 7.6e-295 1017.7 1039 52.1
arahy.Tifrunner.gnm1.ann1.EYX4BI Arachis hypogaea HOM05D005651 ORTHO05D006877 1.0e-294 1017.3 1290 44.7
arahy.Tifrunner.gnm1.ann1.4U9R65 Arachis hypogaea HOM05D005651 ORTHO05D006877 2.9e-294 1015.8 1302 44.2
PSO017G3585 Papaver somniferum HOM05D005651 ORTHO05D006877 9.3e-293 1010.7 1170 47.9
TWI56G0421 Tripterygium wilfordii HOM05D005651 ORTHO05D006877 2.3e-291 1006.1 1150 48.4
THA.LOC104808673 Tarenaya hassleriana HOM05D005651 ORTHO05D006877 7.4e-290 1001.1 1289 43.2
Carub.0007s2821 Capsella rubella HOM05D005651 ORTHO05D006877 1.4e-285 986.9 1300 43.2
AT4G14180 Arabidopsis thaliana HOM05D005651 ORTHO05D006877 1.2e-284 983.8 1292 43.3
Lalb_Chr24g0394531 Lupinus albus HOM05D005651 ORTHO05D006877 2.7e-284 982.6 1119 47.7
Aa31LG9G3210 Aethionema arabicum HOM05D005651 ORTHO05D006877 3.9e-283 978.8 1293 43.5
AL7G42200 Arabidopsis lyrata HOM05D005651 ORTHO05D006877 2.6e-282 976.1 1308 43.0
Nitab4.5_0009569g0040 Nicotiana tabacum HOM05D005651 ORTHO05D006877 9.7e-282 974.2 1010 52.8
EL10Ac3g07437 Beta vulgaris HOM05D005651 ORTHO05D006877 6.3e-281 971.5 1291 43.1
Sp5g13520 Schrenkiella parvula HOM05D005651 ORTHO05D006877 2.6e-279 966.1 1309 42.9
CsaV3_6G003070 Cucumis sativus L. HOM05D005651 ORTHO05D006877 3.6e-276 955.7 1129 46.6
C03p35350 Brassica napus HOM05D005651 ORTHO05D006877 3.1e-272 942.6 1295 41.9
BcaC01g04643 Brassica carinata HOM05D005651 ORTHO05D006877 3.5e-271 939.1 1293 41.9
BolC3t15845H Brassica oleracea HOM05D005651 ORTHO05D006877 3.5e-271 939.1 1293 41.9
A03p29160 Brassica napus HOM05D005651 ORTHO05D006877 5.9e-271 938.3 1312 41.8
ATR0582G376 Amborella trichopoda HOM05D005651 ORTHO05D006877 1.0e-270 937.6 1230 43.1
BcaB01g02715 Brassica carinata HOM05D005651 ORTHO05D006877 9.4e-269 931.0 1293 41.7
ECA238G0348 Erigeron canadensis HOM05D005651 ORTHO05D006877 7.7e-263 911.4 1192 45.1
Cfa008665 Carpinus fangiana HOM05D005651 ORTHO05D006877 8.0e-260 901.4 901 52.7
unitig_748.g8008 Utricularia gibba HOM05D005651 ORTHO05D006877 7.5e-258 894.8 1046 49.6
Dinv32168 Davidia involucrata HOM05D005651 ORTHO05D006877 2.6e-250 869.8 757 59.4
Thhalv10027320m.g Eutrema salsugineum HOM05D005651 ORTHO05D006877 2.6e-250 869.8 1293 40.5
AUR62020881 Chenopodium quinoa HOM05D005651 ORTHO05D006877 5.0e-246 855.5 1246 41.8
AUR62018536 Chenopodium quinoa HOM05D005651 ORTHO05D006877 2.3e-243 846.7 1207 42.6
Atru.chr3.1765 Acer truncatum HOM05D005651 ORTHO05D006877 1.7e-238 830.5 863 51.7
Lj3C268T6 Lonicera japonica HOM05D005651 ORTHO05D006877 3.2e-216 756.5 762 54.1
Ah.04g149640 Amaranthus hybridus HOM05D005651 ORTHO05D006877 3.0e-214 750.0 1069 41.0
Os04g0347800 Oryza sativa ssp. japonica HOM05D005651 ORTHO05D006877 1.2e-212 744.6 1108 40.3
SHI01044 Sapria himalayana HOM05D005651 ORTHO05D006877 2.4e-211 740.3 1052 41.2
Zm00001eb389920 Zea mays HOM05D005651 ORTHO05D006877 7.1e-200 702.2 1001 40.0
Phvul.004G062100 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 1.5e-194 684.5 841 43.9
MELO3C026127.2 Cucumis melo HOM05D005651 ORTHO05D006877 3.2e-184 650.2 797 45.0
SEGI_00340 Sequoiadendron giganteum HOM05D005651 ORTHO05D006877 9.3e-184 648.7 1327 34.4
vmacro15590 Vaccinium macrocarpon HOM05D005651 ORTHO05D006877 7.4e-157 559.3 711 46.0
CARHR220210 Cardamine hirsuta HOM05D005651 ORTHO05D006877 3.0e-150 537.3 670 44.6
Dinv32169 Davidia involucrata HOM05D005651 ORTHO05D006877 1.5e-149 535.0 467 61.2
Lj3A268T25 Lonicera japonica HOM05D005651 ORTHO05D006877 5.7e-149 533.1 479 59.3
CDE02G2388 Ceratophyllum demersum HOM05D005651 ORTHO05D006877 2.2e-145 521.2 634 47.3
Psat2g094320 Pisum sativum HOM05D005651 ORTHO05D006877 5.0e-137 493.4 585 46.3
CARHR220220 Cardamine hirsuta HOM05D005651 ORTHO05D006877 1.7e-113 415.2 653 39.4
Phvul.006G051700 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 2.5e-104 384.8 472 46.2
Atru.chr3.1766 Acer truncatum HOM05D005651 ORTHO05D006877 6.4e-100 370.2 404 52.5
PGSC0003DMG400024589 Solanum tuberosum HOM05D005651 ORTHO05D006877 4.7e-95 354.0 357 52.9
Mapoly0195s0003 Marchantia polymorpha HOM05D005651 ORTHO05D006877 6.4e-92 343.6 1266 26.0
HPP92_024561 Vanilla planifolia HOM05D005651 ORTHO05D006877 3.2e-83 314.7 486 39.3
Pp3c15_15330 Physcomitrium patens HOM05D005651 ORTHO05D006877 1.6e-82 312.4 1248 24.7
Prupe.1G176200 Prunus persica HOM05D005651 ORTHO05D006877 4.0e-78 297.7 609 35.6
HPP92_024560 Vanilla planifolia HOM05D005651 ORTHO05D006877 2.2e-68 265.4 384 41.4
HPP92_024556 Vanilla planifolia HOM05D005651 ORTHO05D006877 1.1e-67 263.1 381 38.3
Psat2g094280 Pisum sativum HOM05D005651 ORTHO05D006877 1.1e-64 253.1 392 38.8
Nitab4.5_0009569g0060 Nicotiana tabacum HOM05D005651 ORTHO05D006877 2.2e-55 222.2 291 43.0
vmacro15591 Vaccinium macrocarpon HOM05D005651 ORTHO05D006877 4.2e-43 181.4 293 40.6
Lalb_Chr24g0394541 Lupinus albus HOM05D005651 ORTHO05D006877 1.7e-36 159.5 142 59.2
unitig_748.g8007 Utricularia gibba HOM05D005651 ORTHO05D006877 1.7e-36 159.5 207 43.0
SHI01039 Sapria himalayana HOM05D005651 ORTHO05D006877 2.9e-36 158.7 137 59.1
Ah.04g149630 Amaranthus hybridus HOM05D005651 ORTHO05D006877 1.9e-35 156.0 142 54.9
Psat0s1368g0040 Pisum sativum HOM05D005651 ORTHO05D006877 1.4e-33 149.8 191 42.9
BraA03t12111Z Brassica rapa HOM05D005651 ORTHO05D006877 4.4e-32 144.8 147 53.7
CSS0048714 Camellia sinensis var. sinensis HOM05D005651 ORTHO05D006877 5.0e-28 131.3 137 50.4
TWI56G0074 Tripterygium wilfordii HOM05D005651 ORTHO05D006877 1.2e-26 126.7 116 57.8
CBR_g39378 Chara braunii HOM05D005651 ORTHO05D006877 5.0e-20 104.8 516 22.7
FAN22G0619 Fragaria x ananassa HOM05D005651 ORTHO05D006877 2.2e-15 89.4 128 42.2
Lj5P691T0 Lonicera japonica HOM05D005651 ORTHO05D006877 1.8e-14 86.3 116 45.7
TPR.G28787 Trifolium pratense HOM05D005651 ORTHO05D006877 1.7e-12 79.7 72 54.2
TAR633G2085 Trochodendron aralioides HOM05D005651 ORTHO05D006877 1.7e-12 79.7 75 52.0
Eucgr.F02519 Eucalyptus grandis HOM05D005651 ORTHO05D006877 5.0e-12 78.2 65 60.0
BcaB01g02718 Brassica carinata HOM05D005651 ORTHO05D006877 8.3e-07 60.8 106 35.8
SHI01042 Sapria himalayana HOM05D005651 ORTHO05D006877 8.3e-07 60.8 56 50.0


User provided reference genes

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