Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G00951 Erythranthe guttata HOM05D005839 ORTHO05D005686 0.0e+00 1115.9 585 100.0
Oeu049072.1 Olea europaea HOM05D005839 ORTHO05D005686 4.9e-42 176.8 935 28.3
Nitab4.5_0000037g0160 Nicotiana tabacum HOM05D005839 ORTHO05D005686 1.4e-41 175.3 940 27.0
MSTRG.4261 Avicennia marina HOM05D005839 ORTHO05D005686 1.2e-40 172.2 369 36.3
MSTRG.9771 Avicennia marina HOM05D005839 ORTHO05D005686 3.0e-39 167.5 801 28.8
Solyc09g092550.4 Solanum lycopersicum HOM05D005839 ORTHO05D005686 3.9e-39 167.2 977 25.9
Sopen09g035450 Solanum pennellii HOM05D005839 ORTHO05D005686 1.1e-36 159.1 969 24.7
SalBow2G2888 Salvia bowleyana HOM05D005839 ORTHO05D005686 2.6e-35 154.5 554 33.6
Actinidia28516 Actinidia chinensis HOM05D005839 ORTHO05D005686 1.3e-34 152.1 956 25.9
SalBow2G2330 Salvia bowleyana HOM05D005839 ORTHO05D005686 2.2e-34 151.4 554 33.4
ECA238G4483 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.1e-32 144.8 705 28.1
Cc03_g09160 Coffea canephora HOM05D005839 ORTHO05D005686 6.0e-32 143.3 283 38.5
CSS0003065 Camellia sinensis var. sinensis HOM05D005839 ORTHO05D005686 1.7e-31 141.7 415 33.3
Lsat_1_v5_gn_2_47881 Lactuca sativa HOM05D005839 ORTHO05D005686 2.5e-30 137.9 603 29.0
Oeu050722.1 Olea europaea HOM05D005839 ORTHO05D009229 6.2e-29 133.3 197 47.2
CiPaw.01G113800 Carya illinoinensis HOM05D005839 ORTHO05D005686 8.1e-29 132.9 264 36.4
GSVIVG01031570001 Vitis vinifera HOM05D005839 ORTHO05D005686 2.4e-28 131.3 411 32.6
PGSC0003DMG400021878 Solanum tuberosum HOM05D005839 ORTHO05D005686 6.8e-28 129.8 259 38.6
Dinv32166 Davidia involucrata HOM05D005839 ORTHO05D005686 1.5e-27 128.6 402 34.6
QL06p027171 Quercus lobata HOM05D005839 ORTHO05D005686 2.0e-27 128.3 247 38.1
Gohir.D09G201300 Gossypium hirsutum HOM05D005839 ORTHO05D005686 9.9e-27 125.9 872 25.2
Hma1.2p1_1457F.1_g284680 Hydrangea macrophylla HOM05D005839 ORTHO05D005686 1.3e-26 125.6 218 42.7
Eucgr.H02631 Eucalyptus grandis HOM05D005839 ORTHO05D005686 2.2e-26 124.8 268 38.8
PGSC0003DMG401021870 Solanum tuberosum HOM05D005839 ORTHO05D005686 2.9e-26 124.4 577 27.4
Gohir.A09G207800 Gossypium hirsutum HOM05D005839 ORTHO05D005686 4.9e-26 123.6 854 26.1
HanXRQChr07g0186001 Helianthus annuus HOM05D005839 ORTHO05D005686 6.4e-26 123.2 801 26.7
Haze_11680 Corylus avellana HOM05D005839 ORTHO05D005686 1.9e-25 121.7 195 40.0
RcHm_v2.0_Chr4g0412531 Rosa chinensis HOM05D005839 ORTHO05D005686 2.4e-25 121.3 118 55.1
Glyma.08G107100 Glycine max HOM05D005839 ORTHO05D005686 3.2e-25 120.9 324 33.0
Phvul.003G048600 Phaseolus vulgaris HOM05D005839 ORTHO05D005686 4.2e-25 120.6 317 33.8
PGR083G0592 Punica granatum HOM05D005839 ORTHO05D005686 7.1e-25 119.8 216 38.0
Cpa.g.sc157.17 Carica papaya HOM05D005839 ORTHO05D005686 1.2e-24 119.0 234 38.9
CAN.G1684.4 Capsicum annuum HOM05D005839 ORTHO05D005686 2.1e-24 118.2 431 29.5
Ciclev10004236m.g Citrus clementina HOM05D005839 ORTHO05D005686 2.1e-24 118.2 262 38.2
Potri.014G146200 Populus trichocarpa HOM05D005839 ORTHO05D005686 2.1e-24 118.2 330 30.6
Sabra02G0179700 Salix brachista HOM05D005839 ORTHO05D005686 3.5e-24 117.5 108 53.7
VMungo0251G1575 Vigna mungo HOM05D005839 ORTHO05D005686 3.5e-24 117.5 413 31.2
Potri.002G235900 Populus trichocarpa HOM05D005839 ORTHO05D005686 4.6e-24 117.1 126 50.0
FAN17G1799 Fragaria x ananassa HOM05D005839 ORTHO05D005686 6.0e-24 116.7 106 55.7
Peaxi162Scf00286g00911 Petunia axillaris HOM05D005839 ORTHO05D005686 6.0e-24 116.7 550 29.3
Sabra14G0109900 Salix brachista HOM05D005839 ORTHO05D005686 1.3e-23 115.5 351 31.6
BcaC01g00210 Brassica carinata HOM05D010750 ORTHO05D005686 2.3e-23 114.8 690 25.2
Hund19024 Selenicereus undatus HOM05D005839 ORTHO05D005686 3.0e-23 114.4 144 45.8
arahy.Tifrunner.gnm1.ann1.52QBHW Arachis hypogaea HOM05D005839 ORTHO05D005686 5.1e-23 113.6 147 48.3
Gorai.005G128100 Gossypium raimondii HOM05D005839 ORTHO05D005686 5.1e-23 113.6 232 37.5
Prupe.1G170500 Prunus persica HOM05D005839 ORTHO05D005686 5.1e-23 113.6 239 40.2
Gorai.006G225000 Gossypium raimondii HOM05D005839 ORTHO05D005686 6.6e-23 113.2 911 25.1
Hma1.2p1_0984F.1_g244280 Hydrangea macrophylla HOM05D005839 ORTHO05D005686 8.7e-23 112.8 373 32.7
Thecc.04G191800 Theobroma cacao HOM05D005839 ORTHO05D005686 8.7e-23 112.8 244 37.3
Duzib151G0277 Durio zibethinus HOM05D005839 ORTHO05D005686 1.1e-22 112.5 244 37.3
Lalb_Chr12g0205781 Lupinus albus HOM05D005839 ORTHO05D005686 1.1e-22 112.5 121 50.4
ATR1147G004 Amborella trichopoda HOM05D005839 ORTHO05D005686 1.5e-22 112.1 328 33.5
Duzib151G0492 Durio zibethinus HOM05D005839 ORTHO05D005686 1.5e-22 112.1 149 45.0
BolC3t19949H Brassica oleracea HOM05D010750 ORTHO05D005686 5.6e-22 110.2 698 26.1
A04p07940 Brassica napus HOM05D010750 ORTHO05D005686 7.3e-22 109.8 747 24.5
FvH4_4g12870 Fragaria vesca HOM05D005839 ORTHO05D005686 7.3e-22 109.8 245 37.6
FAN12G3285 Fragaria x ananassa HOM05D005839 ORTHO05D005686 7.3e-22 109.8 245 37.6
arahy.Tifrunner.gnm1.ann1.SAUI5N Arachis hypogaea HOM05D005839 ORTHO05D005686 9.6e-22 109.4 500 27.4
Gohir.D02G113200 Gossypium hirsutum HOM05D005839 ORTHO05D005686 9.6e-22 109.4 234 37.2
ClCG05G007080 Citrullus lanatus HOM05D005839 ORTHO05D005686 1.3e-21 109.0 244 38.1
Manes.05G199100 Manihot esculenta HOM05D005839 ORTHO05D005686 1.3e-21 109.0 98 52.0
AUR62018535 Chenopodium quinoa HOM05D005839 ORTHO05D005686 2.1e-21 108.2 329 33.7
Psat7g076360 Pisum sativum HOM05D005839 ORTHO05D005686 2.1e-21 108.2 235 38.3
TWI53G2144 Tripterygium wilfordii HOM05D005839 ORTHO05D005686 2.1e-21 108.2 215 35.8
Sed0009973 Sechium edule HOM05D005839 ORTHO05D005686 2.8e-21 107.8 240 36.7
BraA08t34382Z Brassica rapa HOM05D010750 ORTHO05D005686 3.6e-21 107.5 696 26.1
DCAR_005282 Daucus carota HOM05D005839 ORTHO05D005686 3.6e-21 107.5 309 34.0
Duzib268G0552 Durio zibethinus HOM05D005839 ORTHO05D005686 3.6e-21 107.5 248 35.9
arahy.Tifrunner.gnm1.ann1.3YD71H Arachis hypogaea HOM05D005839 ORTHO05D005686 4.8e-21 107.1 391 28.4
Lj6g0025267 Lotus japonicus HOM05D005839 ORTHO05D005686 6.2e-21 106.7 772 23.8
CARHR220270 Cardamine hirsuta HOM05D010750 ORTHO05D005686 1.4e-20 105.5 780 23.6
C03p76940 Brassica napus HOM05D010750 ORTHO05D005686 1.8e-20 105.1 698 25.8
BraA04t16484Z Brassica rapa HOM05D010750 ORTHO05D005686 1.8e-20 105.1 747 24.2
Hund24442 Selenicereus undatus HOM05D005839 ORTHO05D005686 1.8e-20 105.1 241 33.2
MELO3C006781.2 Cucumis melo HOM05D005839 ORTHO05D005686 2.4e-20 104.8 242 36.0
Lsat_1_v5_gn_6_58881 Lactuca sativa HOM05D005839 ORTHO05D005686 3.1e-20 104.4 236 34.3
A08p24270 Brassica napus HOM05D010750 ORTHO05D005686 4.0e-20 104.0 715 26.2
Ca_16430_v3 Cicer arietinum L. HOM05D005839 ORTHO05D005686 4.0e-20 104.0 708 24.4
arahy.Tifrunner.gnm1.ann1.62570H Arachis hypogaea HOM05D005839 ORTHO05D005686 9.0e-20 102.8 893 24.5
AUR62020882 Chenopodium quinoa HOM05D005839 ORTHO05D005686 9.0e-20 102.8 332 32.8
Lj4g0005413 Lotus japonicus HOM05D005839 ORTHO05D005686 9.0e-20 102.8 590 26.1
Gorai.011G150900 Gossypium raimondii HOM05D005839 ORTHO05D005686 2.0e-19 101.7 219 36.1
Ah.04g149590 Amaranthus hybridus HOM05D005839 ORTHO05D005686 2.6e-19 101.3 361 29.4
CsaV3_3G015820 Cucumis sativus L. HOM05D005839 ORTHO05D005686 2.6e-19 101.3 245 35.5
Sc13g0000540 Simmondsia chinensis HOM05D005839 ORTHO05D005686 3.4e-19 100.9 273 35.2
Sed0018641 Sechium edule HOM05D005839 ORTHO05D005686 4.4e-19 100.5 108 50.0
TPR.G11806 Trifolium pratense HOM05D004269 ORTHO05D007106 4.4e-19 100.5 245 34.3
CANSAT78G1593 Cannabis sativa HOM05D005839 ORTHO05D005686 5.8e-19 100.1 570 28.9
Lj3A356G9 Lonicera japonica HOM05D005839 ORTHO05D005686 5.8e-19 100.1 469 28.8
TAR636G1565 Trochodendron aralioides HOM05D005839 ORTHO05D005686 7.6e-19 99.8 146 43.2
Gohir.A10G130200 Gossypium hirsutum HOM05D005839 ORTHO05D005686 1.3e-18 99.0 219 36.1
C04p41620 Brassica napus HOM05D010750 ORTHO05D005686 1.7e-18 98.6 750 24.1
Cpa.g.sc157.18 Carica papaya HOM05D005839 ORTHO05D005686 1.7e-18 98.6 143 41.3
ECA233G5455 Erigeron canadensis HOM05D005839 ORTHO05D005686 2.9e-18 97.8 265 37.0
Gohir.D10G136100 Gossypium hirsutum HOM05D005839 ORTHO05D005686 2.9e-18 97.8 219 35.6
EL10Ac3g07436 Beta vulgaris HOM05D005839 ORTHO05D005686 4.9e-18 97.1 452 27.7
TAR365G0636 Trochodendron aralioides HOM05D005839 ORTHO05D005686 4.9e-18 97.1 273 33.0
arahy.Tifrunner.gnm1.ann1.Q2NVSC Arachis hypogaea HOM05D005839 ORTHO05D000011 6.4e-18 96.7 140 44.3
FAN22G0032 Fragaria x ananassa HOM05D005839 ORTHO05D005686 8.4e-18 96.3 242 36.0
Atru.chr3.1775 Acer truncatum HOM05D005839 ORTHO05D005686 1.1e-17 95.9 149 44.3
MD04G1021500 Malus domestica HOM05D005839 ORTHO05D005686 1.9e-17 95.1 671 27.3
TAR636G0994 Trochodendron aralioides HOM05D005839 ORTHO05D005686 1.9e-17 95.1 164 39.6
FAN07G0261 Fragaria x ananassa HOM05D005839 ORTHO05D005686 2.4e-17 94.7 235 36.2
BcaC02g09348 Brassica carinata HOM05D010750 ORTHO05D005686 3.2e-17 94.4 769 23.1
arahy.Tifrunner.gnm1.ann1.H8QNW8 Arachis hypogaea HOM05D005839 ORTHO05D005686 4.2e-17 94.0 901 23.6
Glyma.05G150200 Glycine max HOM05D005839 ORTHO05D005686 9.3e-17 92.8 606 25.7
HanXRQChr02g0058441 Helianthus annuus HOM05D005839 ORTHO05D005686 9.3e-17 92.8 775 24.3
Atru.chr3.1776 Acer truncatum HOM05D005839 ORTHO05D005686 1.2e-16 92.4 609 26.1
AT4G14200 Arabidopsis thaliana HOM05D010750 ORTHO05D005686 1.6e-16 92.0 802 23.7
BcaNung05575 Brassica carinata HOM05D010750 ORTHO05D005686 1.6e-16 92.0 250 31.6
Actinidia35832 Actinidia chinensis HOM05D005839 ORTHO05D005686 7.8e-16 89.7 617 26.4
Cpa.g.sc157.15 Carica papaya HOM05D005839 ORTHO05D005686 7.8e-16 89.7 432 27.5
ECA233G2442 Erigeron canadensis HOM05D005839 ORTHO05D005686 1.0e-15 89.4 353 27.8
Aa31LG9G3190 Aethionema arabicum HOM05D010750 ORTHO05D005686 1.7e-15 88.6 734 21.9
arahy.Tifrunner.gnm1.ann1.SDG4EV Arachis hypogaea HOM05D005839 ORTHO05D005686 5.1e-15 87.0 253 32.8
Ca_18007_v3 Cicer arietinum L. HOM05D005839 ORTHO05D005686 6.6e-15 86.7 540 24.6
Thhalv10024466m.g Eutrema salsugineum HOM05D010750 ORTHO05D005686 8.7e-15 86.3 806 22.8
FvH4_1g13820 Fragaria vesca HOM05D005839 ORTHO05D005686 1.1e-14 85.9 72 55.6
Sp7g12060 Schrenkiella parvula HOM05D010750 ORTHO05D005686 1.5e-14 85.5 795 22.9
Lj3A375G30 Lonicera japonica HOM05D005839 ORTHO05D005686 5.6e-14 83.6 454 28.0
Carub.0007s2819 Capsella rubella HOM05D010750 ORTHO05D005686 7.3e-14 83.2 809 22.5
Nn8g41260 Nelumbo nucifera HOM05D005839 ORTHO05D005686 1.6e-13 82.0 823 22.8
arahy.Tifrunner.gnm1.ann1.CIA2YT Arachis hypogaea HOM05D005839 ORTHO05D005686 2.8e-13 81.3 90 43.3
BolC4t25741H Brassica oleracea HOM05D010750 ORTHO05D005686 3.6e-13 80.9 757 23.8
Medtr8g081010 Medicago truncatula HOM05D005839 ORTHO05D005686 1.1e-12 79.3 588 23.8
Lalb_Chr07g0186961 Lupinus albus HOM05D005839 ORTHO05D005686 1.4e-12 79.0 116 38.8
Glyma.18G003300 Glycine max HOM05D005839 ORTHO05D005686 4.0e-12 77.4 132 37.9
Aqoxy2G04047 Aquilegia oxysepala HOM05D005839 ORTHO05D005686 6.9e-12 76.6 102 43.1
COL.COLO4_04260 Corchorus olitorius HOM05D005839 ORTHO05D005686 6.9e-12 76.6 567 24.0
THA.LOC104808672 Tarenaya hassleriana HOM05D010750 ORTHO05D005686 6.9e-12 76.6 403 28.8
PSO063G0130 Papaver somniferum HOM05D037519 ORTHO05D037279 3.4e-11 74.3 485 25.4
Gohir.A03G095700 Gossypium hirsutum HOM05D005839 ORTHO05D005686 1.7e-10 72.0 382 27.7
Lalb_Chr07g0186981 Lupinus albus HOM05D005839 ORTHO05D005686 5.4e-09 67.0 204 33.3
arahy.Tifrunner.gnm1.ann1.98ICAR Arachis hypogaea HOM05D000340 ORTHO05D000821 1.2e-08 65.9 125 37.6
SEGI_24376 Sequoiadendron giganteum HOM05D005839 ORTHO05D005686 1.6e-08 65.5 72 41.7
QL06p027203 Quercus lobata HOM05D034196 ORTHO05D005686 4.6e-08 63.9 34 73.5
AL7G42170 Arabidopsis lyrata HOM05D010750 ORTHO05D005686 2.3e-07 61.6 418 26.8
Nn1g08130 Nelumbo nucifera HOM05D005839 ORTHO05D005686 1.9e-06 58.5 513 25.0
Mapoly0008s0012 Marchantia polymorpha HOM05D005839 ORTHO05D005686 3.3e-06 57.8 46 50.0


User provided reference genes

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