Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G00929 Erythranthe guttata HOM05D003621 ORTHO05D004259 3.0e-271 937.9 478 100.0
Migut.J01118 Erythranthe guttata HOM05D003621 ORTHO05D004259 4.4e-134 482.3 503 55.1
Migut.J01117 Erythranthe guttata HOM05D003621 ORTHO05D004259 7.8e-131 471.5 466 57.9
Migut.J01119 Erythranthe guttata HOM05D003621 ORTHO05D004259 6.2e-128 461.8 472 59.1
Migut.J01147 Erythranthe guttata HOM05D003621 ORTHO05D004259 1.8e-127 460.3 525 53.7
Migut.J01104 Erythranthe guttata HOM05D003621 ORTHO05D004259 5.3e-127 458.8 501 56.1
SGA_v2.0_scaffold10G05155 Striga asiatica HOM05D003621 ORTHO05D004259 1.3e-122 444.1 514 51.9
Migut.J01110 Erythranthe guttata HOM05D003621 ORTHO05D004259 3.0e-122 443.0 466 55.4
Migut.J01103 Erythranthe guttata HOM05D003621 ORTHO05D004259 4.3e-121 439.1 281 79.7
Migut.J01113 Erythranthe guttata HOM05D003621 ORTHO05D004259 7.6e-118 428.3 276 77.2
Migut.J01111 Erythranthe guttata HOM05D003621 ORTHO05D004259 1.3e-117 427.6 557 48.1
Migut.J01116 Erythranthe guttata HOM05D003621 ORTHO05D004259 6.4e-117 425.2 505 51.9
Migut.J01112 Erythranthe guttata HOM05D003621 ORTHO05D004259 8.4e-117 424.9 317 71.0
SalBow6G5466 Salvia bowleyana HOM05D003621 ORTHO05D000122 2.3e-114 416.8 291 73.5
PGSC0003DMG400030220 Solanum tuberosum HOM05D003621 ORTHO05D004259 9.0e-111 404.8 469 51.6
Sopen07g012210 Solanum pennellii HOM05D003621 ORTHO05D004259 3.4e-110 402.9 469 51.4
RhsimUnG0196500 Rhododendron simsii HOM05D003621 ORTHO05D004259 2.2e-109 400.2 463 50.5
Gohir.D13G202000 Gossypium hirsutum HOM05D003621 ORTHO05D004259 3.8e-109 399.4 463 50.5
Gorai.013G230900 Gossypium raimondii HOM05D003621 ORTHO05D004259 3.8e-109 399.4 463 50.5
Peaxi162Scf00546g00023 Petunia axillaris HOM05D003621 ORTHO05D004259 4.9e-109 399.1 469 50.7
Peaxi162Scf00231g00033 Petunia axillaris HOM05D003621 ORTHO05D004259 1.4e-108 397.5 461 51.6
Actinidia09421 Actinidia chinensis HOM05D003621 ORTHO05D004259 1.9e-108 397.1 463 50.3
SalBow6G6039 Salvia bowleyana HOM05D003621 ORTHO05D004259 1.9e-108 397.1 307 68.7
Lj7A651T32 Lonicera japonica HOM05D003621 ORTHO05D004259 4.2e-108 396.0 463 50.1
Eucgr.C01036 Eucalyptus grandis HOM05D003621 ORTHO05D004259 9.3e-108 394.8 463 50.5
Gohir.A13G196700 Gossypium hirsutum HOM05D003621 ORTHO05D004259 1.2e-107 394.4 463 49.7
SalBow6G0300 Salvia bowleyana HOM05D003621 ORTHO05D004259 1.2e-107 394.4 307 67.8
Atru.chr7.1358 Acer truncatum HOM05D003621 ORTHO05D004259 1.6e-107 394.0 463 49.5
COL.COLO4_34873 Corchorus olitorius HOM05D003621 ORTHO05D004259 3.5e-107 392.9 463 49.5
AUR62021495 Chenopodium quinoa HOM05D003621 ORTHO05D004259 4.6e-107 392.5 469 49.3
MSTRG.19588 Avicennia marina HOM05D003621 ORTHO05D004259 1.8e-106 390.6 461 49.9
AUR62010986 Chenopodium quinoa HOM05D003621 ORTHO05D004259 1.8e-106 390.6 471 51.0
CSS0027044 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 2.3e-106 390.2 476 49.4
Duzib168G1477 Durio zibethinus HOM05D003621 ORTHO05D004259 2.3e-106 390.2 460 49.1
CSS0004511 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 3.0e-106 389.8 467 50.1
Sopen12g003080 Solanum pennellii HOM05D003621 ORTHO05D004259 3.0e-106 389.8 465 49.7
VMungo0464G0841 Vigna mungo HOM05D003621 ORTHO05D004259 3.0e-106 389.8 460 50.0
PSO832G1684 Papaver somniferum HOM05D003621 ORTHO05D004259 3.9e-106 389.4 460 49.1
Cpa.g.sc23.101 Carica papaya HOM05D003621 ORTHO05D004259 5.1e-106 389.0 461 49.5
Gorai.001G005600 Gossypium raimondii HOM05D003621 ORTHO05D004259 5.1e-106 389.0 466 49.1
CSS0049361 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 8.7e-106 388.3 476 49.2
Ah.14g082090 Amaranthus hybridus HOM05D003621 ORTHO05D004259 1.1e-105 387.9 463 49.7
Migut.J01155 Erythranthe guttata HOM05D003621 ORTHO05D004259 1.5e-105 387.5 466 48.9
Nitab4.5_0005947g0020 Nicotiana tabacum HOM05D003621 ORTHO05D004259 1.9e-105 387.1 469 48.8
Solyc12g007100.2 Solanum lycopersicum HOM05D003621 ORTHO05D004259 1.9e-105 387.1 465 49.2
Gohir.D07G006000 Gossypium hirsutum HOM05D003621 ORTHO05D004259 2.5e-105 386.7 466 48.9
PGSC0003DMG400000311 Solanum tuberosum HOM05D003621 ORTHO05D004259 2.5e-105 386.7 465 49.2
QL02p085200 Quercus lobata HOM05D003621 ORTHO05D004259 3.3e-105 386.3 461 48.6
Dinv36637 Davidia involucrata HOM05D003621 ORTHO05D004259 4.3e-105 386.0 461 49.7
vmacro06217 Vaccinium macrocarpon HOM05D003621 ORTHO05D004259 4.3e-105 386.0 463 50.1
Glyma.07G085800 Glycine max HOM05D003621 ORTHO05D004259 5.7e-105 385.6 460 49.6
Glyma.09G191100 Glycine max HOM05D003621 ORTHO05D004259 5.7e-105 385.6 460 48.9
Oeu044981.1 Olea europaea HOM05D003621 ORTHO05D004259 5.7e-105 385.6 461 49.2
GSVIVG01015385001 Vitis vinifera HOM05D003621 ORTHO05D004259 5.7e-105 385.6 461 50.3
Phvul.004G163800 Phaseolus vulgaris HOM05D003621 ORTHO05D004259 7.4e-105 385.2 460 49.1
CAN.G1529.8 Capsicum annuum HOM05D003621 ORTHO05D004259 9.6e-105 384.8 467 49.3
Thecc.09G109600 Theobroma cacao HOM05D003621 ORTHO05D004259 1.3e-104 384.4 460 50.2
Prupe.7G232000 Prunus persica HOM05D003621 ORTHO05D004259 1.6e-104 384.0 463 48.8
Lj2g0018985 Lotus japonicus HOM05D003621 ORTHO05D004259 2.8e-104 383.3 464 48.1
CiPaw.03G231600 Carya illinoinensis HOM05D003621 ORTHO05D004259 3.7e-104 382.9 463 47.1
SalBow6G3329 Salvia bowleyana HOM05D003621 ORTHO05D004259 4.8e-104 382.5 439 53.1
CsaV3_3G015870 Cucumis sativus L. HOM05D003621 ORTHO05D004259 8.2e-104 381.7 466 49.8
Hma1.2p1_0018F.1_g013590 Hydrangea macrophylla HOM05D003621 ORTHO05D004259 8.2e-104 381.7 465 48.6
Sc08g0007530 Simmondsia chinensis HOM05D003621 ORTHO05D004259 1.1e-103 381.3 461 50.3
Ciclev10008142m.g Citrus clementina HOM05D003621 ORTHO05D004259 1.4e-103 380.9 461 48.8
PSO782G0111 Papaver somniferum HOM05D003621 ORTHO05D004259 1.4e-103 380.9 461 49.0
Haze_25724 Corylus avellana HOM05D003621 ORTHO05D004259 2.4e-103 380.2 461 48.8
MD15G1184200 Malus domestica HOM05D003621 ORTHO05D004259 2.4e-103 380.2 462 48.9
HanXRQChr10g0318561 Helianthus annuus HOM05D003621 ORTHO05D004259 3.1e-103 379.8 463 48.6
MELO3C006786.2 Cucumis melo HOM05D003621 ORTHO05D004259 4.1e-103 379.4 466 49.4
Nn2g11728 Nelumbo nucifera HOM05D003621 ORTHO05D004259 9.0e-103 378.3 461 48.8
Ca_03977_v3 Cicer arietinum L. HOM05D003621 ORTHO05D004259 1.5e-102 377.5 461 49.0
MD02G1046000 Malus domestica HOM05D003621 ORTHO05D004259 2.0e-102 377.1 462 48.7
Haze_25731 Corylus avellana HOM05D003621 ORTHO05D004259 2.6e-102 376.7 461 48.6
Lsat_1_v5_gn_7_40780 Lactuca sativa HOM05D003621 ORTHO05D004259 2.6e-102 376.7 463 49.5
HanXRQChr09g0239661 Helianthus annuus HOM05D003621 ORTHO05D004259 3.4e-102 376.3 461 49.5
FAN23G2072 Fragaria x ananassa HOM05D003621 ORTHO05D004259 5.9e-102 375.6 467 47.5
Sed0008991 Sechium edule HOM05D003621 ORTHO05D004259 5.9e-102 375.6 466 48.3
Nitab4.5_0000114g0080 Nicotiana tabacum HOM05D003621 ORTHO05D004259 7.6e-102 375.2 429 51.0
Nitab4.5_0002904g0090 Nicotiana tabacum HOM05D003621 ORTHO05D004259 7.6e-102 375.2 466 49.1
TAR636G2961 Trochodendron aralioides HOM05D003621 ORTHO05D004259 7.6e-102 375.2 467 48.2
FAN19G2426 Fragaria x ananassa HOM05D003621 ORTHO05D004259 1.0e-101 374.8 476 46.4
Solyc07g023990.3 Solanum lycopersicum HOM05D003621 ORTHO05D004259 1.0e-101 374.8 467 48.4
EL10Ac8g18488 Beta vulgaris HOM05D003621 ORTHO05D004259 1.3e-101 374.4 467 49.3
FAN26G0011 Fragaria x ananassa HOM05D003621 ORTHO05D004259 1.3e-101 374.4 467 47.5
TAR624G1386 Trochodendron aralioides HOM05D003621 ORTHO05D004259 1.3e-101 374.4 461 48.6
Nn8g39169 Nelumbo nucifera HOM05D003621 ORTHO05D004259 2.2e-101 373.6 461 48.8
Potri.018G081000 Populus trichocarpa HOM05D003621 ORTHO05D004259 2.2e-101 373.6 460 48.7
TPR.G25311 Trifolium pratense HOM05D003621 ORTHO05D004259 2.2e-101 373.6 461 48.6
CiPaw.04G163500 Carya illinoinensis HOM05D003621 ORTHO05D004259 2.9e-101 373.2 463 47.3
ClCG05G007150 Citrullus lanatus HOM05D003621 ORTHO05D004259 2.9e-101 373.2 460 49.1
DCAR_028707 Daucus carota HOM05D003621 ORTHO05D004259 2.9e-101 373.2 460 48.9
FvH4_1g04710 Fragaria vesca HOM05D003621 ORTHO05D004259 3.8e-101 372.9 476 46.2
SalBow6G1987 Salvia bowleyana HOM05D003621 ORTHO05D004259 5.0e-101 372.5 286 67.8
CDE08G0484 Ceratophyllum demersum HOM05D003621 ORTHO05D004259 6.5e-101 372.1 466 47.9
Medtr6g088470 Medicago truncatula HOM05D003621 ORTHO05D004259 8.5e-101 371.7 461 48.6
Sabra18G0068200 Salix brachista HOM05D003621 ORTHO05D004259 8.5e-101 371.7 471 46.9
SalBow6G2522 Salvia bowleyana HOM05D003621 ORTHO05D004259 8.5e-101 371.7 467 49.5
Potri.006G158600 Populus trichocarpa HOM05D003621 ORTHO05D004259 1.1e-100 371.3 461 48.4
Aqoxy7G01646 Aquilegia oxysepala HOM05D003621 ORTHO05D004259 1.4e-100 370.9 458 47.6
Lalb_Chr14g0371541 Lupinus albus HOM05D003621 ORTHO05D004259 3.2e-100 369.8 458 48.7
Duzib187G1605 Durio zibethinus HOM05D003621 ORTHO05D004259 5.5e-100 369.0 478 46.4
arahy.Tifrunner.gnm1.ann1.VSCA53 Arachis hypogaea HOM05D003621 ORTHO05D004259 7.2e-100 368.6 460 47.4
FAN28G1412 Fragaria x ananassa HOM05D003621 ORTHO05D004259 9.3e-100 368.2 469 45.4
Aa31sc99G150 Aethionema arabicum HOM05D003621 ORTHO05D004259 2.1e-99 367.1 463 47.5
Sed0020967 Sechium edule HOM05D003621 ORTHO05D004259 2.1e-99 367.1 466 47.6
Os02g0266300 Oryza sativa ssp. japonica HOM05D003621 ORTHO05D004259 4.6e-99 365.9 461 47.5
Manes.03G021400 Manihot esculenta HOM05D003621 ORTHO05D004259 6.1e-99 365.5 463 47.5
AT3G24530 Arabidopsis thaliana HOM05D003621 ORTHO05D004259 1.0e-98 364.8 460 47.6
Gohir.A07G006000 Gossypium hirsutum HOM05D003621 ORTHO05D004259 3.0e-98 363.2 466 47.0
Cc06_g09720 Coffea canephora HOM05D003621 ORTHO05D004259 5.1e-98 362.5 471 46.1
Manes.16G115500 Manihot esculenta HOM05D003621 ORTHO05D004259 6.7e-98 362.1 310 61.6
AL3G40070 Arabidopsis lyrata HOM05D003621 ORTHO05D004259 8.7e-98 361.7 460 47.4
Carub.0003s2492 Capsella rubella HOM05D003621 ORTHO05D004259 1.1e-97 361.3 460 46.7
Dinv41608 Davidia involucrata HOM05D003621 ORTHO05D004259 1.1e-97 361.3 310 61.3
arahy.Tifrunner.gnm1.ann1.EYQI1F Arachis hypogaea HOM05D003621 ORTHO05D004259 1.9e-97 360.5 458 47.2
Psat1g042960 Pisum sativum HOM05D003621 ORTHO05D004259 3.3e-97 359.8 463 46.9
CARHR100670 Cardamine hirsuta HOM05D003621 ORTHO05D004259 5.7e-97 359.0 460 46.7
ECA240G2782 Erigeron canadensis HOM05D003621 ORTHO05D004259 5.7e-97 359.0 463 47.3
Cfa021562 Carpinus fangiana HOM05D003621 ORTHO05D004259 7.4e-97 358.6 429 48.7
Hund26199 Selenicereus undatus HOM05D003621 ORTHO05D004259 1.3e-96 357.8 463 48.2
HPP92_005264 Vanilla planifolia HOM05D003621 ORTHO05D004259 6.3e-96 355.5 457 44.6
Aa31sc29G80 Aethionema arabicum HOM05D003621 ORTHO05D004259 2.4e-95 353.6 307 59.0
Hund09208 Selenicereus undatus HOM05D003621 ORTHO05D004259 2.4e-95 353.6 461 47.9
CDE02G2554 Ceratophyllum demersum HOM05D003621 ORTHO05D004259 3.1e-95 353.2 276 63.0
THA.LOC104808764 Tarenaya hassleriana HOM05D003621 ORTHO05D004259 5.3e-95 352.4 461 47.3
PGR142G3711 Punica granatum HOM05D003621 ORTHO05D004259 5.9e-94 349.0 461 46.0
SMO367G0606 Selaginella moellendorffii HOM05D003621 ORTHO05D004259 5.9e-94 349.0 468 45.9
BcaB06g26656 Brassica carinata HOM05D003621 ORTHO05D004259 7.7e-94 348.6 460 45.4
BcaC06g35719 Brassica carinata HOM05D003621 ORTHO05D004259 7.7e-94 348.6 460 45.4
C07p11700 Brassica napus HOM05D003621 ORTHO05D004259 7.7e-94 348.6 460 45.4
BolC7t41643H Brassica oleracea HOM05D003621 ORTHO05D004259 7.7e-94 348.6 460 45.4
BraA07t28569Z Brassica rapa HOM05D003621 ORTHO05D004259 7.7e-94 348.6 460 45.4
RcHm_v2.0_Chr2g0090311 Rosa chinensis HOM05D003621 ORTHO05D004259 1.3e-93 347.8 476 44.5
A07p07780 Brassica napus HOM05D003621 ORTHO05D004259 1.7e-93 347.4 460 45.2
ATR0315G144 Amborella trichopoda HOM05D003621 ORTHO05D004259 3.8e-93 346.3 461 45.1
vmacro10501 Vaccinium macrocarpon HOM05D003621 ORTHO05D004259 6.5e-93 345.5 462 47.2
Oeu064901.1 Olea europaea HOM05D003621 ORTHO05D004259 8.5e-93 345.1 270 64.8
Thhalv10002506m.g Eutrema salsugineum HOM05D003621 ORTHO05D004259 1.1e-92 344.7 460 45.2
Nitab4.5_0004562g0010 Nicotiana tabacum HOM05D003621 ORTHO05D004259 1.1e-92 344.7 467 46.0
SEGI_35600 Sequoiadendron giganteum HOM05D003621 ORTHO05D004259 1.1e-92 344.7 276 63.0
TWI63G0694 Tripterygium wilfordii HOM05D003621 ORTHO05D004259 1.4e-92 344.4 461 46.2
Lalb_Chr24g0397591 Lupinus albus HOM05D003621 ORTHO05D004259 1.9e-92 344.0 460 45.4
SalBow6G4774 Salvia bowleyana HOM05D003621 ORTHO05D004259 7.2e-92 342.0 307 62.2
Sp3g22320 Schrenkiella parvula HOM05D003621 ORTHO05D004259 1.6e-91 340.9 460 44.6
SalBow6G4876 Salvia bowleyana HOM05D003621 ORTHO05D004259 5.1e-90 335.9 263 66.5
TWI34G1138 Tripterygium wilfordii HOM05D003621 ORTHO05D004259 6.7e-90 335.5 471 45.0
SGA_v2.0_scaffold30G12371 Striga asiatica HOM05D003621 ORTHO05D004259 1.1e-89 334.7 463 44.9
unitig_22.g6628 Utricularia gibba HOM05D003621 ORTHO05D004259 1.1e-89 334.7 303 57.1
Zm00001eb204000 Zea mays HOM05D003621 ORTHO05D004259 1.1e-89 334.7 460 44.1
SalBow6G3888 Salvia bowleyana HOM05D003621 ORTHO05D004259 6.3e-88 328.9 337 56.1
SHI02763 Sapria himalayana HOM05D003621 ORTHO05D004259 1.1e-87 328.2 478 43.3
Actinidia32682 Actinidia chinensis HOM05D003621 ORTHO05D004259 1.6e-83 314.3 468 45.1
SGA_v2.0_scaffold137G35130 Striga asiatica HOM05D003621 ORTHO05D004259 3.9e-82 309.7 276 59.4
Aqoxy7G01647 Aquilegia oxysepala HOM05D003621 ORTHO05D004259 2.5e-68 263.8 274 54.4
Aqoxy7G01648 Aquilegia oxysepala HOM05D003621 ORTHO05D004259 2.5e-68 263.8 249 54.6
Nn8g39160 Nelumbo nucifera HOM05D003621 ORTHO05D004259 9.8e-57 225.3 335 44.2
Nn8g39167 Nelumbo nucifera HOM05D003621 ORTHO05D004259 5.4e-55 219.5 302 46.0
Oeu023080.1 Olea europaea HOM05D003621 ORTHO05D004259 2.3e-45 187.6 292 42.1
Dinv30495 Davidia involucrata HOM05D003621 ORTHO05D004259 3.6e-43 180.3 266 41.0
Hma1.2p1_1455F.1_g284390 Hydrangea macrophylla HOM05D003621 ORTHO05D004259 3.1e-42 177.2 267 37.5
HanXRQChr16g0522441 Helianthus annuus HOM05D003621 ORTHO05D004259 1.5e-41 174.9 151 55.6
Sabra06G0123800 Salix brachista HOM05D000193 ORTHO05D000402 7.0e-39 166.0 210 47.6
AagrBONN_evm.TU.Sc2ySwM_368.1977 Anthoceros agrestis HOM05D003621 ORTHO05D004259 2.3e-34 151.0 154 53.2
Medtr0776s0010 Medicago truncatula HOM05D001546 ORTHO05D004259 4.4e-33 146.7 254 34.6
Nn8g39165 Nelumbo nucifera HOM05D003621 ORTHO05D004259 4.4e-33 146.7 131 58.0
MCO01G086 Micromonas commoda HOM05D003621 ORTHO05D004259 2.7e-30 137.5 187 40.1
MSTRG.22673 Avicennia marina HOM05D003621 ORTHO05D004259 1.9e-28 131.3 245 34.3
SalBow6G0008 Salvia bowleyana HOM05D003621 ORTHO05D004259 2.5e-28 131.0 82 70.7
Cc00_g28820 Coffea canephora HOM05D003621 ORTHO05D004259 4.3e-28 130.2 133 53.4
Migut.I00952 Erythranthe guttata HOM05D003621 ORTHO05D004259 5.6e-28 129.8 253 34.4
Aqoxy3G01597 Aquilegia oxysepala HOM05D003621 ORTHO05D004259 2.3e-26 124.4 118 53.4
Cre04.g218900 Chlamydomonas reinhardtii HOM05D003621 ORTHO05D010935 1.4e-23 115.2 259 30.9
Cre04.g219000 Chlamydomonas reinhardtii HOM05D003621 ORTHO05D010935 5.4e-23 113.2 259 30.9
CBR_g46749 Chara braunii HOM05D003621 ORTHO05D004259 2.5e-20 104.4 200 30.5
Lsat_1_v5_gn_3_101741 Lactuca sativa HOM05D003621 ORTHO05D004259 2.8e-19 100.9 108 50.9
Hma1.2p1_0001F.1_g001560 Hydrangea macrophylla HOM05D003621 ORTHO05D004259 5.2e-18 96.7 126 35.7
CSS0016063 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 9.9e-17 92.4 97 51.5
CSS0042262 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 8.4e-16 89.4 62 61.3
Lsat_1_v5_gn_1_124140 Lactuca sativa HOM05D003621 ORTHO05D004259 2.7e-14 84.3 76 52.6
BcaB03g14578 Brassica carinata HOM05D003621 ORTHO05D004259 2.4e-10 71.2 86 45.3
HanXRQChr10g0282301 Helianthus annuus HOM05D003621 ORTHO05D004259 4.9e-08 63.5 77 41.6
Actinidia24746 Actinidia chinensis HOM05D006672 ORTHO05D007769 1.1e-07 62.4 58 50.0
TAR376G0449 Trochodendron aralioides HOM05D003621 ORTHO05D004259 2.7e-06 57.8 64 51.6


User provided reference genes

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