Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G00919 Erythranthe guttata HOM05D004821 ORTHO05D005711 7.5e-62 240.4 122 100.0
Migut.G00920 Erythranthe guttata HOM05D004821 ORTHO05D005711 2.8e-56 221.9 112 99.1
SGA_v2.0_scaffold12G06219 Striga asiatica HOM05D004821 ORTHO05D005711 1.5e-30 136.3 114 65.8
Oeu033086.1 Olea europaea HOM05D004821 ORTHO05D005711 8.4e-29 130.6 115 57.4
MSTRG.4551 Avicennia marina HOM05D004821 ORTHO05D005711 3.2e-28 128.6 115 60.9
SalBow3G1744 Salvia bowleyana HOM05D004821 ORTHO05D005711 7.8e-27 124.0 113 59.3
unitig_37.g12004 Utricularia gibba HOM05D004821 ORTHO05D005711 3.0e-26 122.1 86 65.1
PGSC0003DMG400029438 Solanum tuberosum HOM05D004821 ORTHO05D005711 1.5e-25 119.8 120 53.3
Sopen04g003670 Solanum pennellii HOM05D004821 ORTHO05D005711 2.5e-25 119.0 120 51.7
Peaxi162Scf00329g00933 Petunia axillaris HOM05D004821 ORTHO05D005711 3.3e-25 118.6 85 62.4
Solyc04g008520.3 Solanum lycopersicum HOM05D004821 ORTHO05D005711 5.6e-25 117.9 120 50.8
Rhsim09G0003600 Rhododendron simsii HOM05D004821 ORTHO05D005711 1.6e-24 116.3 119 52.1
vmacro00722 Vaccinium macrocarpon HOM05D004821 ORTHO05D005711 3.1e-23 112.1 109 52.3
PGR042G3220 Punica granatum HOM05D004821 ORTHO05D005711 6.9e-23 110.9 77 64.9
Nitab4.5_0006607g0020 Nicotiana tabacum HOM05D004821 ORTHO05D005711 2.0e-22 109.4 119 47.9
CSS0009446 Camellia sinensis var. sinensis HOM05D004821 ORTHO05D005711 3.4e-22 108.6 79 60.8
CSS0027099 Camellia sinensis var. sinensis HOM05D004821 ORTHO05D005711 3.4e-22 108.6 79 60.8
Potri.017G007300 Populus trichocarpa HOM05D004821 ORTHO05D005711 5.8e-22 107.8 77 63.6
Nitab4.5_0000129g0470 Nicotiana tabacum HOM05D004821 ORTHO05D005711 7.6e-22 107.5 118 46.6
Potri.007G144900 Populus trichocarpa HOM05D004821 ORTHO05D005711 9.9e-22 107.1 79 60.8
Ciclev10021021m.g Citrus clementina HOM05D004821 ORTHO05D005711 1.7e-21 106.3 77 59.7
Migut.N03030 Erythranthe guttata HOM05D004821 ORTHO05D005711 1.7e-21 106.3 88 59.1
Sabra07G0115900 Salix brachista HOM05D004821 ORTHO05D005711 1.7e-21 106.3 79 59.5
Eucgr.A00428 Eucalyptus grandis HOM05D004821 ORTHO05D005711 2.2e-21 105.9 77 66.2
Nn1g09422 Nelumbo nucifera HOM05D004821 ORTHO05D005711 2.2e-21 105.9 90 57.8
HanXRQChr03g0094031 Helianthus annuus HOM05D004821 ORTHO05D005711 4.9e-21 104.8 80 60.0
Manes.01G010100 Manihot esculenta HOM05D004821 ORTHO05D005711 4.9e-21 104.8 80 58.8
Dinv24752 Davidia involucrata HOM05D004821 ORTHO05D005711 6.4e-21 104.4 108 50.0
CiPaw.01G201700 Carya illinoinensis HOM05D004821 ORTHO05D005711 8.4e-21 104.0 81 58.0
Actinidia18397 Actinidia chinensis HOM05D004821 ORTHO05D005711 1.4e-20 103.2 112 48.2
Cc03_g15980 Coffea canephora HOM05D004821 ORTHO05D005711 1.4e-20 103.2 80 56.2
Actinidia11430 Actinidia chinensis HOM05D004821 ORTHO05D005711 1.9e-20 102.8 79 57.0
Lj6A619G67 Lonicera japonica HOM05D004821 ORTHO05D005711 1.9e-20 102.8 80 56.2
COL.COLO4_16819 Corchorus olitorius HOM05D004821 ORTHO05D005711 2.4e-20 102.4 77 59.7
Psat4g001240 Pisum sativum HOM05D004821 ORTHO05D005711 3.2e-20 102.1 80 55.0
GSVIVG01038250001 Vitis vinifera HOM05D004821 ORTHO05D005711 3.2e-20 102.1 120 43.3
arahy.Tifrunner.gnm1.ann1.PJYW2S Arachis hypogaea HOM05D004821 ORTHO05D005711 4.2e-20 101.7 77 58.4
arahy.Tifrunner.gnm1.ann1.TNA3AF Arachis hypogaea HOM05D004821 ORTHO05D005711 4.2e-20 101.7 77 58.4
Duzib205G0343 Durio zibethinus HOM05D004821 ORTHO05D005711 4.2e-20 101.7 77 61.0
Hma1.2p1_0872F.1_g231140 Hydrangea macrophylla HOM05D004821 ORTHO05D005711 4.2e-20 101.7 129 44.2
Sabra17G0008100 Salix brachista HOM05D004821 ORTHO05D005711 4.2e-20 101.7 77 58.4
Sed0001216 Sechium edule HOM05D004821 ORTHO05D005711 4.2e-20 101.7 80 53.8
CiPaw.02G124700 Carya illinoinensis HOM05D004821 ORTHO05D005711 5.4e-20 101.3 80 58.8
Haze_11130 Corylus avellana HOM05D004821 ORTHO05D005711 5.4e-20 101.3 85 54.1
Thecc.03G204200 Theobroma cacao HOM05D004821 ORTHO05D005711 5.4e-20 101.3 77 58.4
Cfa008514 Carpinus fangiana HOM05D004821 ORTHO05D005711 7.1e-20 100.9 85 55.3
TPR.G5989 Trifolium pratense HOM05D004821 ORTHO05D005711 7.1e-20 100.9 80 55.0
CANSAT56G1350 Cannabis sativa HOM05D004821 ORTHO05D005711 9.3e-20 100.5 80 55.0
TAR362G0479 Trochodendron aralioides HOM05D004821 ORTHO05D005711 1.2e-19 100.1 123 44.7
Eucgr.A00426 Eucalyptus grandis HOM05D004821 ORTHO05D005711 1.6e-19 99.8 77 63.6
Cpa.g.sc151.7 Carica papaya HOM05D004821 ORTHO05D005711 2.7e-19 99.0 85 52.9
Ca_13543_v3 Cicer arietinum L. HOM05D004821 ORTHO05D005711 2.7e-19 99.0 120 42.5
VMungo1215G0856 Vigna mungo HOM05D004821 ORTHO05D005711 2.7e-19 99.0 108 44.4
Medtr4g134950 Medicago truncatula HOM05D004821 ORTHO05D005711 4.6e-19 98.2 80 55.0
Ah.07g203220 Amaranthus hybridus HOM05D004821 ORTHO05D005711 1.0e-18 97.1 111 45.9
BcaB06g29351 Brassica carinata HOM05D004821 ORTHO05D005711 1.0e-18 97.1 80 56.2
A04p33140 Brassica napus HOM05D004821 ORTHO05D005711 1.0e-18 97.1 82 53.7
C04p70840 Brassica napus HOM05D004821 ORTHO05D005711 1.0e-18 97.1 82 53.7
BraA04t18773Z Brassica rapa HOM05D004821 ORTHO05D005711 1.0e-18 97.1 82 53.7
Phvul.003G074500 Phaseolus vulgaris HOM05D004821 ORTHO05D005711 1.0e-18 97.1 112 42.9
Atru.chr3.1996 Acer truncatum HOM05D004821 ORTHO05D005711 1.3e-18 96.7 78 59.0
BcaB06g29509 Brassica carinata HOM05D004821 ORTHO05D005711 1.3e-18 96.7 82 53.7
Gohir.A11G015800 Gossypium hirsutum HOM05D004821 ORTHO05D005711 1.3e-18 96.7 81 56.8
Sp4g26050 Schrenkiella parvula HOM05D004821 ORTHO05D005711 1.3e-18 96.7 107 46.7
Eucgr.L00828 Eucalyptus grandis HOM05D004821 ORTHO05D005711 2.3e-18 95.9 77 61.0
Gohir.A12G247900 Gossypium hirsutum HOM05D004821 ORTHO05D005711 3.0e-18 95.5 84 51.2
Gorai.008G266600 Gossypium raimondii HOM05D004821 ORTHO05D005711 3.0e-18 95.5 84 51.2
EL10Ac3g06166 Beta vulgaris HOM05D004821 ORTHO05D005711 3.9e-18 95.1 105 46.7
Gohir.D12G248600 Gossypium hirsutum HOM05D004821 ORTHO05D005711 3.9e-18 95.1 84 51.2
A03p24610 Brassica napus HOM05D004821 ORTHO05D005711 6.6e-18 94.4 112 44.6
BolC3t15281H Brassica oleracea HOM05D004821 ORTHO05D005711 6.6e-18 94.4 116 44.0
Gohir.D11G015800 Gossypium hirsutum HOM05D004821 ORTHO05D005711 6.6e-18 94.4 105 49.5
Gorai.007G016400 Gossypium raimondii HOM05D004821 ORTHO05D005711 6.6e-18 94.4 105 49.5
Aa31LG1G25650 Aethionema arabicum HOM05D004821 ORTHO05D005711 8.7e-18 94.0 77 57.1
Ah.13g073170 Amaranthus hybridus HOM05D004821 ORTHO05D005711 8.7e-18 94.0 98 46.9
BcaB01g03351 Brassica carinata HOM05D004821 ORTHO05D005711 8.7e-18 94.0 121 42.1
BraA03t11666Z Brassica rapa HOM05D004821 ORTHO05D005711 8.7e-18 94.0 122 43.4
AUR62002483 Chenopodium quinoa HOM05D004821 ORTHO05D005711 8.7e-18 94.0 80 55.0
Lj4g0002865 Lotus japonicus HOM05D004821 ORTHO05D005711 8.7e-18 94.0 105 47.6
QL10p064358 Quercus lobata HOM05D004821 ORTHO05D005711 8.7e-18 94.0 79 54.4
RcHm_v2.0_Chr2g0084461 Rosa chinensis HOM05D004821 ORTHO05D005711 8.7e-18 94.0 83 51.8
AL4G42830 Arabidopsis lyrata HOM05D004821 ORTHO05D005711 1.5e-17 93.2 81 53.1
Carub.0004s2652 Capsella rubella HOM05D004821 ORTHO05D005711 1.5e-17 93.2 81 53.1
Duzib084G0132 Durio zibethinus HOM05D004821 ORTHO05D005711 1.5e-17 93.2 77 54.5
Glyma.17G000700 Glycine max HOM05D004821 ORTHO05D005711 1.5e-17 93.2 81 54.3
Lalb_Chr13g0304481 Lupinus albus HOM05D004821 ORTHO05D005711 1.5e-17 93.2 79 51.9
C03p29340 Brassica napus HOM05D004821 ORTHO05D005711 2.5e-17 92.4 121 43.0
Thhalv10001539m.g Eutrema salsugineum HOM05D004821 ORTHO05D005711 2.5e-17 92.4 115 42.6
BcaB01g03349 Brassica carinata HOM05D004821 ORTHO05D005711 4.3e-17 91.7 79 54.4
MELO3C014389.2 Cucumis melo HOM05D004821 ORTHO05D005711 4.3e-17 91.7 77 50.6
CsaV3_6G037260 Cucumis sativus L. HOM05D004821 ORTHO05D005711 4.3e-17 91.7 77 51.9
Aqoxy5G00034 Aquilegia oxysepala HOM05D004821 ORTHO05D005711 7.3e-17 90.9 90 50.0
AT2G43950 Arabidopsis thaliana HOM05D004821 ORTHO05D005711 7.3e-17 90.9 117 43.6
ClCG09G014480 Citrullus lanatus HOM05D004821 ORTHO05D005711 7.3e-17 90.9 77 50.6
FvH4_1g00191 Fragaria vesca HOM05D004821 ORTHO05D005711 9.6e-17 90.5 80 50.0
FAN07G0128 Fragaria x ananassa HOM05D004821 ORTHO05D005711 9.6e-17 90.5 80 50.0
Sc25g0003030 Simmondsia chinensis HOM05D004821 ORTHO05D005711 9.6e-17 90.5 80 48.8
FAN26G2560 Fragaria x ananassa HOM05D004821 ORTHO05D005711 1.3e-16 90.1 80 50.0
FAN26G2598 Fragaria x ananassa HOM05D004821 ORTHO05D005711 1.3e-16 90.1 80 50.0
MBI10_g16333_MAGBIO Magnolia biondii HOM05D004821 ORTHO05D005711 1.3e-16 90.1 120 42.5
Prupe.7G269800 Prunus persica HOM05D004821 ORTHO05D005711 1.3e-16 90.1 80 51.2
CARHR139130 Cardamine hirsuta HOM05D004821 ORTHO05D005711 2.1e-16 89.4 81 50.6
Lsat_1_v5_gn_7_44620 Lactuca sativa HOM05D004821 ORTHO05D005711 2.1e-16 89.4 113 42.5
Thecc.05G001800 Theobroma cacao HOM05D004821 ORTHO05D005711 2.1e-16 89.4 118 43.2
DCAR_029913 Daucus carota HOM05D004821 ORTHO05D005711 2.8e-16 89.0 77 51.9
MD00G1087400 Malus domestica HOM05D004821 ORTHO05D005711 3.6e-16 88.6 74 55.4
PSO675G6376 Papaver somniferum HOM05D004821 ORTHO05D005711 3.6e-16 88.6 120 42.5
THA.LOC104804303 Tarenaya hassleriana HOM05D004821 ORTHO05D005711 3.6e-16 88.6 82 50.0
C07p46620 Brassica napus HOM05D004821 ORTHO05D005711 8.1e-16 87.4 82 48.8
BolC7t45177H Brassica oleracea HOM05D004821 ORTHO05D005711 8.1e-16 87.4 82 48.8
MD15G1143200 Malus domestica HOM05D004821 ORTHO05D005711 8.1e-16 87.4 74 54.1
THA.LOC104802343 Tarenaya hassleriana HOM05D004821 ORTHO05D005711 8.1e-16 87.4 113 42.5
AUR62023709 Chenopodium quinoa HOM05D004821 ORTHO05D005711 1.8e-15 86.3 70 58.6
RcHm_v2.0_Chr7g0203201 Rosa chinensis HOM05D004821 ORTHO05D005711 1.8e-15 86.3 83 47.0
CARHR257120 Cardamine hirsuta HOM05D004821 ORTHO05D005711 5.3e-15 84.7 79 49.4
Gohir.D08G113600 Gossypium hirsutum HOM05D004821 ORTHO05D005711 5.3e-15 84.7 73 52.1
Hund22594 Selenicereus undatus HOM05D004821 ORTHO05D005711 6.9e-15 84.3 80 46.2
HPP92_004517 Vanilla planifolia HOM05D004821 ORTHO05D005711 1.2e-14 83.6 113 38.1
Gohir.A08G102400 Gossypium hirsutum HOM05D004821 ORTHO05D005711 2.0e-14 82.8 73 50.7
PSO732G0644 Papaver somniferum HOM05D004821 ORTHO05D005711 3.4e-14 82.0 84 48.8
Gorai.004G122500 Gossypium raimondii HOM05D004821 ORTHO05D005711 4.5e-14 81.6 73 50.7
HPP92_004526 Vanilla planifolia HOM05D004821 ORTHO05D005711 7.6e-14 80.9 113 37.2
CDE02G4358 Ceratophyllum demersum HOM05D004821 ORTHO05D005711 3.8e-13 78.6 75 49.3
CDE09G1042 Ceratophyllum demersum HOM05D001480 ORTHO05D001331 3.8e-13 78.6 75 49.3
Hund12277 Selenicereus undatus HOM05D004821 ORTHO05D005711 1.2e-11 73.6 72 50.0
Zm00001eb246750 Zea mays HOM05D004821 ORTHO05D005711 2.7e-11 72.4 99 43.4
BcaC02g07141 Brassica carinata HOM05D004821 ORTHO05D005711 1.0e-10 70.5 52 61.5
Os02g0608900 Oryza sativa ssp. japonica HOM05D004821 ORTHO05D005711 3.9e-10 68.6 84 46.4
ATR0743G163 Amborella trichopoda HOM05D004821 ORTHO05D005711 1.1e-09 67.0 76 38.2
ECA232G4673 Erigeron canadensis HOM05D004821 ORTHO05D005711 2.1e-08 62.8 51 54.9
AagrBONN_evm.TU.Sc2ySwM_362.2829 Anthoceros agrestis HOM05D004821 ORTHO05D005711 2.8e-08 62.4 81 35.8
TAR362G0528 Trochodendron aralioides HOM05D004821 ORTHO05D005711 2.8e-08 62.4 48 56.2
Mapoly0065s0080 Marchantia polymorpha HOM05D004821 ORTHO05D005711 4.8e-08 61.6 63 47.6
SMO119G0235 Selaginella moellendorffii HOM05D004821 ORTHO05D005711 4.0e-07 58.5 68 41.2
CAN.G458.7 Capsicum annuum HOM05D004821 ORTHO05D005711 6.9e-07 57.8 54 48.1
Pp3c26_11540 Physcomitrium patens HOM05D004821 ORTHO05D005711 1.5e-06 56.6 79 38.0
Pp3c3_3220 Physcomitrium patens HOM05D004821 ORTHO05D005711 3.4e-06 55.5 80 35.0
Zm00001eb133840 Zea mays HOM05D004821 ORTHO05D005711 3.4e-06 55.5 114 31.6


User provided reference genes

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