Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G00917 Erythranthe guttata HOM05D007257 ORTHO05D008924 4.6e-47 191.0 107 100.0
Migut.N03023 Erythranthe guttata HOM05D007257 ORTHO05D008924 5.6e-21 104.4 110 57.3
SalBow3G3102 Salvia bowleyana HOM05D007257 ORTHO05D008924 1.8e-19 99.4 118 49.2
COL.COLO4_14410 Corchorus olitorius HOM05D007257 ORTHO05D008924 2.4e-19 99.0 114 50.9
SGA_v2.0_scaffold12G06221 Striga asiatica HOM05D007257 ORTHO05D008924 3.4e-18 95.1 108 50.0
Ciclev10022922m.g Citrus clementina HOM05D007257 ORTHO05D008924 5.8e-18 94.4 119 55.5
Gohir.D09G190900 Gossypium hirsutum HOM05D007257 ORTHO05D008924 7.6e-18 94.0 109 45.9
Gorai.006G213700 Gossypium raimondii HOM05D007257 ORTHO05D008924 7.6e-18 94.0 109 45.9
Gohir.A09G196300 Gossypium hirsutum HOM05D007257 ORTHO05D008924 1.7e-17 92.8 109 45.0
QL10p064610 Quercus lobata HOM05D007257 ORTHO05D008924 2.9e-17 92.0 112 47.3
QL10p065732 Quercus lobata HOM05D007257 ORTHO05D008924 2.9e-17 92.0 112 47.3
Nitab4.5_0001110g0010 Nicotiana tabacum HOM05D007257 ORTHO05D008924 4.9e-17 91.3 116 49.1
Atru.chr3.1975 Acer truncatum HOM05D007257 ORTHO05D008924 1.9e-16 89.4 109 47.7
Manes.01G009800 Manihot esculenta HOM05D007257 ORTHO05D008924 3.2e-16 88.6 111 47.7
Peaxi162Scf00169g00094 Petunia axillaris HOM05D007257 ORTHO05D008924 3.2e-16 88.6 119 46.2
PGR042G0806 Punica granatum HOM05D007257 ORTHO05D008924 4.2e-16 88.2 118 43.2
Glyma.04G203100 Glycine max HOM05D007257 ORTHO05D008924 7.1e-16 87.4 116 44.8
TWI15G0669 Tripterygium wilfordii HOM05D007257 ORTHO05D008924 7.1e-16 87.4 114 45.6
Haze_11125 Corylus avellana HOM05D007257 ORTHO05D008924 9.3e-16 87.0 114 44.7
Nn7g37449 Nelumbo nucifera HOM05D007257 ORTHO05D008924 1.6e-15 86.3 108 44.4
PGSC0003DMG400029271 Solanum tuberosum HOM05D007257 ORTHO05D008924 1.6e-15 86.3 118 42.4
Thecc.05G001300 Theobroma cacao HOM05D007257 ORTHO05D008924 1.6e-15 86.3 114 48.2
Cfa008520 Carpinus fangiana HOM05D007257 ORTHO05D008924 2.7e-15 85.5 112 42.9
Nitab4.5_0000160g0050 Nicotiana tabacum HOM05D007257 ORTHO05D008924 4.6e-15 84.7 109 48.6
Manes.05G207200 Manihot esculenta HOM05D007257 ORTHO05D008924 6.0e-15 84.3 107 43.9
Rhsim09G0003000 Rhododendron simsii HOM05D007257 ORTHO05D008924 6.0e-15 84.3 112 44.6
Glyma.06G162400 Glycine max HOM05D007257 ORTHO05D008924 7.9e-15 84.0 118 42.4
Oeu018062.1 Olea europaea HOM05D007257 ORTHO05D008924 7.9e-15 84.0 120 42.5
Sopen12g032450 Solanum pennellii HOM05D007257 ORTHO05D008924 7.9e-15 84.0 118 44.9
vmacro00725 Vaccinium macrocarpon HOM05D007257 ORTHO05D008924 1.0e-14 83.6 122 43.4
Sc13g0007600 Simmondsia chinensis HOM05D007257 ORTHO05D008924 3.0e-14 82.0 116 41.4
Phvul.009G159100 Phaseolus vulgaris HOM05D007257 ORTHO05D008924 3.9e-14 81.6 116 43.1
CiPaw.01G202100 Carya illinoinensis HOM05D007257 ORTHO05D008924 8.7e-14 80.5 113 43.4
Rhsim09G0003300 Rhododendron simsii HOM05D007257 ORTHO05D008924 1.5e-13 79.7 109 43.1
SGA_v2.0_scaffold25G11017 Striga asiatica HOM05D007257 ORTHO05D008924 1.5e-13 79.7 109 43.1
Actinidia18394 Actinidia chinensis HOM05D008933 ORTHO05D011098 3.3e-13 78.6 69 59.4
Glyma.05G198900 Glycine max HOM05D007257 ORTHO05D008924 3.3e-13 78.6 126 38.9
Peaxi162Scf00057g00224 Petunia axillaris HOM05D007257 ORTHO05D008924 4.3e-13 78.2 113 46.0
Nn1g09433 Nelumbo nucifera HOM05D007257 ORTHO05D008924 7.4e-13 77.4 112 42.9
Potri.007G145500 Populus trichocarpa HOM05D007257 ORTHO05D008924 9.6e-13 77.0 103 45.6
Eucgr.A00421 Eucalyptus grandis HOM05D007257 ORTHO05D008924 1.3e-12 76.6 115 35.7
Dinv24749 Davidia involucrata HOM05D007257 ORTHO05D008924 2.8e-12 75.5 95 44.2
EL10Ac3g06173 Beta vulgaris HOM05D007257 ORTHO05D008924 8.2e-12 73.9 128 35.2
Potri.017G002100 Populus trichocarpa HOM05D007257 ORTHO05D008924 1.1e-11 73.6 103 42.7
Lj1g0006483 Lotus japonicus HOM05D007257 ORTHO05D008924 1.4e-11 73.2 116 43.1
TAR365G0873 Trochodendron aralioides HOM05D007257 ORTHO05D008924 1.4e-11 73.2 104 38.5
CiPaw.02G125200 Carya illinoinensis HOM05D007257 ORTHO05D008924 1.8e-11 72.8 74 48.6
Lalb_Chr12g0202631 Lupinus albus HOM05D007257 ORTHO05D008924 1.8e-11 72.8 114 42.1
THA.LOC104827561 Tarenaya hassleriana HOM05D007257 ORTHO05D008924 1.8e-11 72.8 110 37.3
Ah.07g203290 Amaranthus hybridus HOM05D007257 ORTHO05D008924 3.1e-11 72.0 124 34.7
Lalb_Chr11g0068971 Lupinus albus HOM05D007257 ORTHO05D008924 6.9e-11 70.9 115 41.7
PGSC0003DMG400020384 Solanum tuberosum HOM05D007257 ORTHO05D008924 9.0e-11 70.5 107 42.1
Sabra07G0115500 Salix brachista HOM05D007257 ORTHO05D008924 2.6e-10 68.9 103 41.7
Psat5g055880 Pisum sativum HOM05D007257 ORTHO05D008924 3.4e-10 68.6 108 38.9
Solyc12g017960.1 Solanum lycopersicum HOM05D007257 ORTHO05D008924 5.8e-10 67.8 107 41.1
TPR.G7792 Trifolium pratense HOM05D007257 ORTHO05D008924 5.8e-10 67.8 107 40.2
Hma1.2p1_1782F.1_g302120 Hydrangea macrophylla HOM05D007257 ORTHO05D008924 7.6e-10 67.4 74 54.1
Sopen12g009180 Solanum pennellii HOM05D007257 ORTHO05D008924 1.0e-09 67.0 107 41.1
Aa31LG1G25680 Aethionema arabicum HOM05D007257 ORTHO05D008924 1.7e-09 66.2 112 34.8
Medtr3g098390 Medicago truncatula HOM05D007257 ORTHO05D008924 1.7e-09 66.2 109 37.6
Sp5g03270 Schrenkiella parvula HOM05D007257 ORTHO05D008924 1.7e-09 66.2 121 37.2
BcaC07g40552 Brassica carinata HOM05D007257 ORTHO05D008924 4.9e-09 64.7 124 34.7
C08p34830 Brassica napus HOM05D007257 ORTHO05D008924 4.9e-09 64.7 124 34.7
Dinv33249 Davidia involucrata HOM05D008933 ORTHO05D011098 6.5e-09 64.3 73 50.7
AT3G59880 Arabidopsis thaliana HOM05D007257 ORTHO05D008924 8.4e-09 63.9 124 33.1
A09p52160 Brassica napus HOM05D007257 ORTHO05D008924 1.9e-08 62.8 124 33.9
BolC8t51085H Brassica oleracea HOM05D007257 ORTHO05D008924 1.9e-08 62.8 124 33.9
BraA09t40647Z Brassica rapa HOM05D007257 ORTHO05D008924 1.9e-08 62.8 124 33.9
Sabra17G0006100 Salix brachista HOM05D007257 ORTHO05D008924 1.9e-08 62.8 70 47.1
Glyma.08G006200 Glycine max HOM05D007257 ORTHO05D008924 2.5e-08 62.4 123 32.5
Sp4g26100 Schrenkiella parvula HOM05D007257 ORTHO05D008924 2.5e-08 62.4 112 35.7
A05p04160 Brassica napus HOM05D007257 ORTHO05D008924 3.2e-08 62.0 113 33.6
BraA05t19402Z Brassica rapa HOM05D007257 ORTHO05D008924 3.2e-08 62.0 113 33.6
Nn1g09434 Nelumbo nucifera HOM05D007257 ORTHO05D008924 3.2e-08 62.0 112 32.1
AL5G42000 Arabidopsis lyrata HOM05D007257 ORTHO05D008924 4.2e-08 61.6 124 31.5
CANSAT01G1842 Cannabis sativa HOM05D007257 ORTHO05D008924 4.2e-08 61.6 120 35.0
Sed0023616 Sechium edule HOM05D007257 ORTHO05D008924 4.2e-08 61.6 113 36.3
CARHR139190 Cardamine hirsuta HOM05D007257 ORTHO05D008924 5.5e-08 61.2 113 36.3
ClCG06G009780 Citrullus lanatus HOM05D007257 ORTHO05D008924 5.5e-08 61.2 117 38.5
AUR62002488 Chenopodium quinoa HOM05D007257 ORTHO05D008924 7.1e-08 60.8 112 36.6
MELO3C008506.2 Cucumis melo HOM05D007257 ORTHO05D008924 7.1e-08 60.8 120 35.0
Nn7g37446 Nelumbo nucifera HOM05D000089 ORTHO05D000104 1.6e-07 59.7 71 42.3
Phvul.002G279900 Phaseolus vulgaris HOM05D007257 ORTHO05D008924 1.6e-07 59.7 111 33.3
BcaC07g40438 Brassica carinata HOM05D007257 ORTHO05D008924 2.1e-07 59.3 124 36.3
BolC4t22123H Brassica oleracea HOM05D007257 ORTHO05D008924 2.1e-07 59.3 113 32.7
CARHR170210 Cardamine hirsuta HOM05D007257 ORTHO05D008924 2.1e-07 59.3 123 35.0
CsaV3_2G011240 Cucumis sativus L. HOM05D007257 ORTHO05D008924 2.1e-07 59.3 120 34.2
BcaC02g12345 Brassica carinata HOM05D007257 ORTHO05D008924 2.7e-07 58.9 113 32.7
C04p04930 Brassica napus HOM05D007257 ORTHO05D008924 2.7e-07 58.9 113 32.7
Thhalv10001750m.g Eutrema salsugineum HOM05D007257 ORTHO05D008924 6.0e-07 57.8 112 33.9
Carub.0004s2657 Capsella rubella HOM05D007257 ORTHO05D008924 7.9e-07 57.4 113 37.2
Oeu039258.1 Olea europaea HOM05D007257 ORTHO05D008924 2.3e-06 55.8 109 36.7
Lsat_1_v5_gn_6_63300 Lactuca sativa HOM05D008933 ORTHO05D011098 3.9e-06 55.1 109 38.5
BraA03t11669Z Brassica rapa HOM05D007257 ORTHO05D008924 6.7e-06 54.3 113 37.2
Prupe.7G270300 Prunus persica HOM05D007257 ORTHO05D008924 8.7e-06 53.9 149 36.2


User provided reference genes

Program Settings