Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G00878 Erythranthe guttata HOM05D000079 ORTHO05D002610 1.3e-31 139.0 68 100.0
Migut.G00872 Erythranthe guttata HOM05D000079 ORTHO05D002610 1.4e-28 129.0 64 96.9
Migut.G00874 Erythranthe guttata HOM05D000079 ORTHO05D002610 1.8e-28 128.6 64 98.4
Migut.G00880 Erythranthe guttata HOM05D000079 ORTHO05D002610 1.8e-28 128.6 64 98.4
Migut.G00935 Erythranthe guttata HOM05D000079 ORTHO05D002610 6.7e-28 126.7 64 95.3
Migut.G00941 Erythranthe guttata HOM05D000079 ORTHO05D002610 5.3e-25 117.1 62 91.9
Migut.G00884 Erythranthe guttata HOM05D000079 ORTHO05D002610 2.6e-24 114.8 62 88.7
Migut.G00943 Erythranthe guttata HOM05D000079 ORTHO05D002610 2.6e-24 114.8 62 88.7
Migut.K00045 Erythranthe guttata HOM05D000079 ORTHO05D002610 1.3e-18 95.9 63 69.8
SalBow3G2979 Salvia bowleyana HOM05D000079 ORTHO05D002610 1.4e-17 92.4 62 71.0
Migut.J01873 Erythranthe guttata HOM05D000079 ORTHO05D002610 1.3e-15 85.9 61 62.3
SalBow6G0754 Salvia bowleyana HOM05D000079 ORTHO05D002610 2.2e-15 85.1 63 57.1
Hma1.2p1_0620F.1_g190520 Hydrangea macrophylla HOM05D000079 ORTHO05D002610 2.5e-14 81.6 57 59.6
TAR633G0440 Trochodendron aralioides HOM05D000079 ORTHO05D002610 3.2e-14 81.3 57 59.6
PGSC0003DMG400016249 Solanum tuberosum HOM05D000079 ORTHO05D002610 5.5e-14 80.5 56 58.9
SGA_v2.0_scaffold94G28408 Striga asiatica HOM05D000079 ORTHO05D002610 7.2e-14 80.1 62 56.5
Oeu001217.1 Olea europaea HOM05D000079 ORTHO05D002610 1.6e-13 79.0 57 61.4
Oeu034708.1 Olea europaea HOM05D000079 ORTHO05D002610 1.6e-13 79.0 59 55.9
Lj8A195G15 Lonicera japonica HOM05D000079 ORTHO05D002610 2.7e-13 78.2 54 57.4
Lj8C14T3 Lonicera japonica HOM05D000079 ORTHO05D002610 2.7e-13 78.2 54 57.4
MSTRG.6501 Avicennia marina HOM05D000079 ORTHO05D002610 3.6e-13 77.8 65 58.5
Migut.K00020 Erythranthe guttata HOM05D000079 ORTHO05D002610 3.6e-13 77.8 62 54.8
MSTRG.27411 Avicennia marina HOM05D000079 ORTHO05D002610 4.7e-13 77.4 55 58.2
Lj1g0001343 Lotus japonicus HOM05D000079 ORTHO05D002610 4.7e-13 77.4 54 59.3
Nitab4.5_0001003g0130 Nicotiana tabacum HOM05D000079 ORTHO05D002610 6.1e-13 77.0 56 57.1
Migut.D01573 Erythranthe guttata HOM05D000079 ORTHO05D002610 8.0e-13 76.6 64 53.1
Peaxi162Scf00254g00136 Petunia axillaris HOM05D000079 ORTHO05D002610 8.0e-13 76.6 56 57.1
CARHR057110 Cardamine hirsuta HOM05D000079 ORTHO05D002610 1.0e-12 76.3 56 62.5
Cc00_g15670 Coffea canephora HOM05D000079 ORTHO05D002610 1.8e-12 75.5 58 55.2
Nitab4.5_0005553g0020 Nicotiana tabacum HOM05D000079 ORTHO05D002610 1.8e-12 75.5 56 55.4
A07p32830 Brassica napus HOM05D000079 ORTHO05D002610 2.3e-12 75.1 58 55.2
CSS0002559 Camellia sinensis var. sinensis HOM05D000079 ORTHO05D002610 2.3e-12 75.1 53 58.5
AT1G65450 Arabidopsis thaliana HOM05D000079 ORTHO05D002610 3.0e-12 74.7 56 58.9
Sp5g20230 Schrenkiella parvula HOM05D000079 ORTHO05D002610 3.0e-12 74.7 58 56.9
Ciclev10010861m.g Citrus clementina HOM05D000079 ORTHO05D002610 4.0e-12 74.3 57 54.4
Lalb_Chr24g0403061 Lupinus albus HOM05D000079 ORTHO05D002610 4.0e-12 74.3 54 57.4
TPR.G31050 Trifolium pratense HOM05D000079 ORTHO05D002610 4.0e-12 74.3 55 54.5
Carub.0002s1119 Capsella rubella HOM05D000079 ORTHO05D002610 5.2e-12 73.9 57 57.9
Ca_08245_v3 Cicer arietinum L. HOM05D000079 ORTHO05D002610 5.2e-12 73.9 57 50.9
Thhalv10018535m.g Eutrema salsugineum HOM05D000079 ORTHO05D002610 5.2e-12 73.9 58 56.9
AL2G22140 Arabidopsis lyrata HOM05D000079 ORTHO05D002610 6.8e-12 73.6 56 58.9
EL10Ac4g10024 Beta vulgaris HOM05D000079 ORTHO05D002610 8.8e-12 73.2 56 55.4
BolC6t38998H Brassica oleracea HOM05D000079 ORTHO05D002610 8.8e-12 73.2 58 55.2
BraA07t30910Z Brassica rapa HOM05D000079 ORTHO05D002610 8.8e-12 73.2 58 55.2
DCAR_031595 Daucus carota HOM05D000079 ORTHO05D002610 8.8e-12 73.2 53 60.4
Medtr7g084910 Medicago truncatula HOM05D000079 ORTHO05D002610 8.8e-12 73.2 57 50.9
VMungo0464G2152 Vigna mungo HOM05D000079 ORTHO05D002610 8.8e-12 73.2 57 54.4
Manes.12G001800 Manihot esculenta HOM05D000079 ORTHO05D002610 1.2e-11 72.8 56 53.6
SGA_v2.0_scaffold69G23036 Striga asiatica HOM05D000079 ORTHO05D002610 1.2e-11 72.8 62 58.1
TAR362G0537 Trochodendron aralioides HOM05D000079 ORTHO05D002610 1.2e-11 72.8 53 58.5
Hund07375 Selenicereus undatus HOM05D000079 ORTHO05D002610 1.5e-11 72.4 56 53.6
Psat0s2994g0080 Pisum sativum HOM05D000079 ORTHO05D002610 2.0e-11 72.0 53 52.8
SGA_v2.0_scaffold13G06353 Striga asiatica HOM05D000079 ORTHO05D002610 2.0e-11 72.0 57 59.6
Cfa006219 Carpinus fangiana HOM05D000079 ORTHO05D002610 2.6e-11 71.6 53 56.6
Glyma.16G150600 Glycine max HOM05D000079 ORTHO05D002610 2.6e-11 71.6 57 50.9
TAR362G0278 Trochodendron aralioides HOM05D000079 ORTHO05D002610 2.6e-11 71.6 57 52.6
C06p39060 Brassica napus HOM05D000079 ORTHO05D002610 3.4e-11 71.2 58 53.4
Nn1g09672 Nelumbo nucifera HOM05D000079 ORTHO05D002610 3.4e-11 71.2 55 56.4
BcaB05g24117 Brassica carinata HOM05D000079 ORTHO05D002610 4.4e-11 70.9 58 51.7
ATR0743G096 Amborella trichopoda HOM05D000079 ORTHO05D002610 5.7e-11 70.5 57 49.1
Glyma.16G044300 Glycine max HOM05D000079 ORTHO05D002610 5.7e-11 70.5 58 50.0
GSVIVG01003748001 Vitis vinifera HOM05D000079 ORTHO05D002610 5.7e-11 70.5 54 53.7
CiPaw.07G085300 Carya illinoinensis HOM05D000079 ORTHO05D002610 7.5e-11 70.1 55 50.9
Manes.13G000900 Manihot esculenta HOM05D000079 ORTHO05D002610 7.5e-11 70.1 59 50.8
Phvul.001G097500 Phaseolus vulgaris HOM05D000079 ORTHO05D002610 7.5e-11 70.1 53 54.7
QL01p051268 Quercus lobata HOM05D000079 ORTHO05D002610 7.5e-11 70.1 57 49.1
MSTRG.9241 Avicennia marina HOM05D000079 ORTHO05D002610 9.8e-11 69.7 63 49.2
Nn1g09832 Nelumbo nucifera HOM05D000079 ORTHO05D002610 1.3e-10 69.3 51 56.9
C02p17440 Brassica napus HOM05D000079 ORTHO05D002610 1.7e-10 68.9 58 51.7
BolC2t07859H Brassica oleracea HOM05D000079 ORTHO05D002610 1.7e-10 68.9 58 51.7
Medtr7g084940 Medicago truncatula HOM05D000079 ORTHO05D002610 1.7e-10 68.9 53 52.8
TPR.G32195 Trifolium pratense HOM05D000079 ORTHO05D002610 1.7e-10 68.9 57 47.4
A02p13230 Brassica napus HOM05D000079 ORTHO05D002610 2.2e-10 68.6 58 53.4
BraA02t06379Z Brassica rapa HOM05D000079 ORTHO05D002610 2.2e-10 68.6 58 53.4
Phvul.004G062600 Phaseolus vulgaris HOM05D000079 ORTHO05D002610 2.2e-10 68.6 57 49.1
Potri.010G180000 Populus trichocarpa HOM05D000079 ORTHO05D002610 2.2e-10 68.6 56 53.6
Rhsim09G0128400 Rhododendron simsii HOM05D000079 ORTHO05D002610 2.2e-10 68.6 51 52.9
SGA_v2.0_scaffold39G15170 Striga asiatica HOM05D000079 ORTHO05D002610 2.8e-10 68.2 62 53.2
Duzib106G1734 Durio zibethinus HOM05D000079 ORTHO05D002610 3.7e-10 67.8 55 50.9
Glyma.02G069100 Glycine max HOM05D000079 ORTHO05D002610 4.8e-10 67.4 55 49.1
PGR119G0406 Punica granatum HOM05D000079 ORTHO05D002610 4.8e-10 67.4 55 47.3
Sc09g0001340 Simmondsia chinensis HOM05D000079 ORTHO05D002610 4.8e-10 67.4 58 58.6
THA.LOC104825536 Tarenaya hassleriana HOM05D000079 ORTHO05D002610 4.8e-10 67.4 54 55.6
Lsat_1_v5_gn_0_14521 Lactuca sativa HOM05D000079 ORTHO05D002610 6.3e-10 67.0 60 48.3
Thecc.05G111000 Theobroma cacao HOM05D000079 ORTHO05D002610 6.3e-10 67.0 55 49.1
C09p65140 Brassica napus HOM05D000079 ORTHO05D002610 1.1e-09 66.2 58 50.0
Migut.D01559 Erythranthe guttata HOM05D000079 ORTHO05D002610 1.1e-09 66.2 65 47.7
Eucgr.B01441 Eucalyptus grandis HOM05D000079 ORTHO05D002610 1.4e-09 65.9 53 49.1
HanXRQChr05g0141771 Helianthus annuus HOM05D000079 ORTHO05D002610 1.4e-09 65.9 51 54.9
Atru.chr12.1649 Acer truncatum HOM05D000079 ORTHO05D002610 1.8e-09 65.5 53 49.1
vmacro10417 Vaccinium macrocarpon HOM05D000079 ORTHO05D002610 2.4e-09 65.1 53 45.3
Rhsim09G0128700 Rhododendron simsii HOM05D000079 ORTHO05D002610 3.1e-09 64.7 51 49.0
Sabra10G0138000 Salix brachista HOM05D000079 ORTHO05D002610 3.1e-09 64.7 58 48.3
Gohir.A08G227600 Gossypium hirsutum HOM05D000079 ORTHO05D002610 7.0e-09 63.5 55 52.7
Prupe.6G364800 Prunus persica HOM05D000079 ORTHO05D002610 7.0e-09 63.5 51 51.0
FAN09G0046 Fragaria x ananassa HOM05D000079 ORTHO05D002610 9.1e-09 63.2 55 49.1
FAN14G3083 Fragaria x ananassa HOM05D000079 ORTHO05D002610 9.1e-09 63.2 55 49.1
VMungo1383G0154 Vigna mungo HOM05D000079 ORTHO05D002610 9.1e-09 63.2 58 48.3
COL.COLO4_32081 Corchorus olitorius HOM05D000079 ORTHO05D002610 1.6e-08 62.4 56 48.2
Gohir.D08G247950 Gossypium hirsutum HOM05D000079 ORTHO05D002610 1.6e-08 62.4 55 52.7
Gorai.004G264500 Gossypium raimondii HOM05D000079 ORTHO05D002610 2.0e-08 62.0 55 50.9
unitig_37.g12273 Utricularia gibba HOM05D000079 ORTHO05D002610 2.0e-08 62.0 56 48.2
Glyma.19G107700 Glycine max HOM05D000079 ORTHO05D002610 2.7e-08 61.6 41 58.5
arahy.Tifrunner.gnm1.ann1.L8L2Y0 Arachis hypogaea HOM05D000079 ORTHO05D002610 4.5e-08 60.8 59 47.5
Migut.K00016 Erythranthe guttata HOM05D000079 ORTHO05D002610 4.5e-08 60.8 54 46.3
arahy.Tifrunner.gnm1.ann1.Q7SBED Arachis hypogaea HOM05D000079 ORTHO05D002610 7.7e-08 60.1 61 45.9
HPP92_005392 Vanilla planifolia HOM05D000079 ORTHO05D002610 1.0e-07 59.7 59 40.7
ClCG11G009050 Citrullus lanatus HOM05D000079 ORTHO05D002610 1.7e-07 58.9 56 42.9
FvH4_6g00100 Fragaria vesca HOM05D000079 ORTHO05D002610 1.7e-07 58.9 55 47.3
HPP92_013584 Vanilla planifolia HOM05D000079 ORTHO05D002610 1.9e-06 55.5 55 43.6
PSO541G6427 Papaver somniferum HOM05D000079 ORTHO05D002610 2.5e-06 55.1 64 37.5
Migut.F02092 Erythranthe guttata HOM05D000079 ORTHO05D002610 5.5e-06 53.9 33 69.7
Sopen11g004420 Solanum pennellii HOM05D000079 ORTHO05D002610 5.5e-06 53.9 31 67.7


User provided reference genes

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