Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G00780 Erythranthe guttata HOM05D009933 ORTHO05D012084 2.3e-93 345.5 172 100.0
SalBow7G3223 Salvia bowleyana HOM05D009933 ORTHO05D012084 1.0e-35 154.1 147 49.0
SalBow7G3334 Salvia bowleyana HOM05D000059 ORTHO05D012084 1.0e-35 154.1 147 49.0
SGA_v2.0_scaffold74G24613 Striga asiatica HOM05D009933 ORTHO05D012084 4.9e-35 151.8 153 47.1
SalBow7G2832 Salvia bowleyana HOM05D009933 ORTHO05D012084 7.9e-33 144.4 146 47.9
Migut.I00636 Erythranthe guttata HOM05D009933 ORTHO05D012084 9.7e-31 137.5 168 44.6
SGA_v2.0_scaffold74G24619 Striga asiatica HOM05D009933 ORTHO05D012084 4.8e-30 135.2 124 52.4
SGA_v2.0_scaffold74G24609 Striga asiatica HOM05D009933 ORTHO05D009712 6.9e-29 131.3 146 44.5
Oeu043379.1 Olea europaea HOM05D009933 ORTHO05D012084 3.4e-28 129.0 173 37.0
unitig_60.g25616 Utricularia gibba HOM05D009933 ORTHO05D012084 2.9e-27 125.9 163 38.0
Oeu043429.1 Olea europaea HOM05D009933 ORTHO05D012084 1.2e-25 120.6 173 35.8
Solyc08g016100.1 Solanum lycopersicum HOM05D009933 ORTHO05D012084 6.9e-21 104.8 180 35.6
PGSC0003DMG400003969 Solanum tuberosum HOM05D009933 ORTHO05D012084 1.2e-20 104.0 180 35.6
Peaxi162Scf01623g00014 Petunia axillaris HOM05D009933 ORTHO05D012084 2.0e-20 103.2 157 35.7
Solyc08g016120.1 Solanum lycopersicum HOM05D009933 ORTHO05D012084 5.9e-20 101.7 177 34.5
Solyc08g016110.1 Solanum lycopersicum HOM05D009933 ORTHO05D012084 1.1e-18 97.4 177 33.9
PGSC0003DMG400038811 Solanum tuberosum HOM05D009933 ORTHO05D012084 1.4e-18 97.1 176 35.2
RcHm_v2.0_Chr3g0457691 Rosa chinensis HOM05D008339 ORTHO05D009712 2.5e-18 96.3 172 35.5
Solyc11g005470.1 Solanum lycopersicum HOM05D009933 ORTHO05D012084 2.5e-18 96.3 180 33.9
Oeu060879.1 Olea europaea HOM05D009933 ORTHO05D012084 3.2e-18 95.9 174 36.2
CAN.G676.49 Capsicum annuum HOM05D009933 ORTHO05D012084 1.6e-17 93.6 169 32.0
Prupe.6G309300 Prunus persica HOM05D008339 ORTHO05D009712 1.6e-17 93.6 160 33.1
MD12G1203500 Malus domestica HOM05D008339 ORTHO05D009712 2.1e-17 93.2 159 30.8
SGA_v2.0_scaffold74G24614 Striga asiatica HOM05D008339 ORTHO05D009712 2.7e-17 92.8 113 41.6
PGSC0003DMG400003994 Solanum tuberosum HOM05D009933 ORTHO05D012084 6.1e-17 91.7 179 34.6
CANSAT54G0094 Cannabis sativa HOM05D008339 ORTHO05D009712 1.4e-16 90.5 147 34.0
Rhsim11G0099000 Rhododendron simsii HOM05D008339 ORTHO05D009712 1.4e-16 90.5 151 30.5
CANSAT54G1683 Cannabis sativa HOM05D008339 ORTHO05D009712 5.1e-16 88.6 147 34.0
FAN05G1492 Fragaria x ananassa HOM05D008339 ORTHO05D009712 5.1e-16 88.6 160 33.1
FAN02G4119 Fragaria x ananassa HOM05D008339 ORTHO05D009712 6.7e-16 88.2 175 32.6
Nitab4.5_0002441g0060 Nicotiana tabacum HOM05D009933 ORTHO05D012084 6.7e-16 88.2 115 36.5
FvH4_6g08020 Fragaria vesca HOM05D008339 ORTHO05D009712 3.3e-15 85.9 175 32.6
FAN14G1454 Fragaria x ananassa HOM05D008339 ORTHO05D009712 3.3e-15 85.9 175 32.6
MD12G1203300 Malus domestica HOM05D008339 ORTHO05D009712 4.4e-15 85.5 163 33.1
Potri.005G007100 Populus trichocarpa HOM05D008339 ORTHO05D009712 7.4e-15 84.7 165 32.1
Sabra05G0018000 Salix brachista HOM05D008339 ORTHO05D009712 1.3e-14 84.0 165 31.5
MD12G1203400 Malus domestica HOM05D008339 ORTHO05D009712 2.2e-14 83.2 165 29.1
Solyc04g015510.1 Solanum lycopersicum HOM05D009933 ORTHO05D012084 4.8e-14 82.0 177 29.9
Sabra13G0004800 Salix brachista HOM05D008339 ORTHO05D009712 8.2e-14 81.3 161 31.7
MELO3C004166.2 Cucumis melo HOM05D008339 ORTHO05D009712 1.4e-13 80.5 148 31.8
Sed0007759 Sechium edule HOM05D008339 ORTHO05D009712 1.4e-13 80.5 150 32.0
Ciclev10013648m.g Citrus clementina HOM05D008339 ORTHO05D009712 9.1e-13 77.8 153 31.4
FvH4_6g07980 Fragaria vesca HOM05D008339 ORTHO05D009712 2.0e-12 76.6 169 30.2
FAN14G5780 Fragaria x ananassa HOM05D008339 ORTHO05D009712 2.0e-12 76.6 169 30.2
Eucgr.E00366 Eucalyptus grandis HOM05D008339 ORTHO05D009712 4.5e-12 75.5 153 33.3
Cpa.g.sc48.196 Carica papaya HOM05D008339 ORTHO05D009712 7.7e-12 74.7 146 32.9
MELO3C031525.2 Cucumis melo HOM05D008339 ORTHO05D009712 7.7e-12 74.7 147 30.6
PGR031G0599 Punica granatum HOM05D008339 ORTHO05D009712 1.0e-11 74.3 168 32.7
QL04p007223 Quercus lobata HOM05D003146 ORTHO05D001819 1.0e-11 74.3 161 26.7
AT1G09360 Arabidopsis thaliana HOM05D013394 ORTHO05D009712 1.3e-11 73.9 151 28.5
PGR031G3971 Punica granatum HOM05D008339 ORTHO05D009712 1.3e-11 73.9 178 30.3
Sabra05G0006500 Salix brachista HOM05D008339 ORTHO05D009712 2.9e-11 72.8 139 30.9
PGR004G1038 Punica granatum HOM05D008339 ORTHO05D009712 3.8e-11 72.4 164 28.0
TWI12G1182 Tripterygium wilfordii HOM05D008339 ORTHO05D009712 8.5e-11 71.2 174 28.2
Cfa012848 Carpinus fangiana HOM05D008339 ORTHO05D009712 1.4e-10 70.5 170 28.2
MELO3C031306.2 Cucumis melo HOM05D008339 ORTHO05D009712 2.5e-10 69.7 135 31.1
Thecc.05G309700 Theobroma cacao HOM05D008339 ORTHO05D009712 3.2e-10 69.3 151 27.2
Haze_08675 Corylus avellana HOM05D008339 ORTHO05D009712 5.5e-10 68.6 159 28.9
Peaxi162Scf01623g00015 Petunia axillaris HOM05D009933 ORTHO05D012084 1.2e-09 67.4 95 36.8
PGR031G3403 Punica granatum HOM05D008339 ORTHO05D009712 2.7e-09 66.2 141 30.5
TAR627G0716 Trochodendron aralioides HOM05D008403 ORTHO05D010317 3.6e-09 65.9 142 26.1
Haze_04054 Corylus avellana HOM05D008339 ORTHO05D009712 4.7e-09 65.5 159 26.4
TAR362G0027 Trochodendron aralioides HOM05D008339 ORTHO05D009712 1.0e-08 64.3 160 30.0
CARHR178520 Cardamine hirsuta HOM05D013394 ORTHO05D009712 2.3e-08 63.2 152 25.7
Sc02g0000800 Simmondsia chinensis HOM05D009933 ORTHO05D012084 2.3e-08 63.2 148 31.1
MELO3C031307.2 Cucumis melo HOM05D008339 ORTHO05D009712 3.0e-08 62.8 135 28.9
Thhalv10009592m.g Eutrema salsugineum HOM05D013394 ORTHO05D009712 3.0e-08 62.8 152 25.7
BraA06t23824Z Brassica rapa HOM05D009911 ORTHO05D009712 6.7e-08 61.6 150 30.0
Sp1g07970 Schrenkiella parvula HOM05D013394 ORTHO05D009712 3.3e-07 59.3 150 22.7
A06p06110 Brassica napus HOM05D009911 ORTHO05D009712 5.7e-07 58.5 150 29.3
Haze_03215 Corylus avellana HOM05D003146 ORTHO05D001819 7.4e-07 58.2 152 23.0
Carub.0001s0870 Capsella rubella HOM05D013394 ORTHO05D009712 9.7e-07 57.8 173 23.7
A06p06100 Brassica napus HOM05D013394 ORTHO05D009712 1.7e-06 57.0 151 23.8
Cfa004856 Carpinus fangiana HOM05D012615 ORTHO05D010044 1.7e-06 57.0 144 25.0
BraA06t23823Z Brassica rapa HOM05D013394 ORTHO05D009712 2.2e-06 56.6 151 23.8
C05p07340 Brassica napus HOM05D013394 ORTHO05D009712 2.8e-06 56.2 151 23.2
Thhalv10009653m.g Eutrema salsugineum HOM05D009911 ORTHO05D009712 2.8e-06 56.2 172 25.0
Oeu016936.1 Olea europaea HOM05D008403 ORTHO05D010317 2.8e-06 56.2 148 27.7
PGR031G2810 Punica granatum HOM05D008339 ORTHO05D009712 3.7e-06 55.8 144 27.8
QL04p005594 Quercus lobata HOM05D003146 ORTHO05D001819 3.7e-06 55.8 146 26.7
TAR633G1553 Trochodendron aralioides HOM05D012615 ORTHO05D010044 3.7e-06 55.8 112 31.2
BcaC05g24789 Brassica carinata HOM05D013394 ORTHO05D009712 4.8e-06 55.5 154 26.0
BolC5t29492H Brassica oleracea HOM05D013394 ORTHO05D009712 4.8e-06 55.5 154 26.0
FAN02G0526 Fragaria x ananassa HOM05D000010 ORTHO05D004316 4.8e-06 55.5 83 39.8
MELO3C000722.2 Cucumis melo HOM05D003146 ORTHO05D001819 8.2e-06 54.7 135 25.2


User provided reference genes

Program Settings