Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G00716 Erythranthe guttata HOM05D006777 ORTHO05D008360 4.5e-89 331.3 170 100.0
MSTRG.4231 Avicennia marina HOM05D006777 ORTHO05D008360 6.5e-88 327.4 170 98.2
Duzib268G0333 Durio zibethinus HOM05D006777 ORTHO05D008360 1.9e-87 325.9 170 97.1
SalBow8G2353 Salvia bowleyana HOM05D006777 ORTHO05D008360 1.9e-87 325.9 170 97.6
SalBow8G2632 Salvia bowleyana HOM05D006777 ORTHO05D008360 1.9e-87 325.9 170 97.6
Thecc.04G200300 Theobroma cacao HOM05D006777 ORTHO05D008360 1.9e-87 325.9 170 97.1
Actinidia23410 Actinidia chinensis HOM05D006777 ORTHO05D008360 3.2e-87 325.1 170 97.1
Glyma.08G111500 Glycine max HOM05D006777 ORTHO05D008360 7.2e-87 323.9 170 96.5
Sc25g0003260 Simmondsia chinensis HOM05D006777 ORTHO05D008360 1.2e-86 323.2 170 95.9
THA.LOC104804809 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 1.6e-86 322.8 170 96.5
RcHm_v2.0_Chr4g0414361 Rosa chinensis HOM05D006777 ORTHO05D008360 2.1e-86 322.4 170 95.3
RcHm_v2.0_Chr7g0213901 Rosa chinensis HOM05D006777 ORTHO05D008360 2.1e-86 322.4 170 95.3
Sopen12g033210 Solanum pennellii HOM05D006777 ORTHO05D008360 2.1e-86 322.4 170 96.5
Glyma.05G153800 Glycine max HOM05D006777 ORTHO05D008360 2.7e-86 322.0 170 95.9
Solyc12g098430.2 Solanum lycopersicum HOM05D006777 ORTHO05D008360 2.7e-86 322.0 170 95.9
Lj4g0000567 Lotus japonicus HOM05D006777 ORTHO05D008360 3.6e-86 321.6 169 95.9
THA.LOC104808706 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 3.6e-86 321.6 170 95.9
Manes.03G146100 Manihot esculenta HOM05D006777 ORTHO05D008360 4.7e-86 321.2 170 94.7
TAR362G0671 Trochodendron aralioides HOM05D006777 ORTHO05D008360 7.9e-86 320.5 170 94.1
BcaC02g09355 Brassica carinata HOM05D006777 ORTHO05D008360 1.0e-85 320.1 170 94.7
CSS0000801 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.0e-85 320.1 170 94.7
HanXRQChr01g0022451 Helianthus annuus HOM05D006777 ORTHO05D008360 1.0e-85 320.1 170 95.9
CANSAT78G1417 Cannabis sativa HOM05D006777 ORTHO05D008360 1.4e-85 319.7 170 95.3
Ciclev10006063m.g Citrus clementina HOM05D006777 ORTHO05D008360 1.4e-85 319.7 170 94.1
FvH4_4g13710 Fragaria vesca HOM05D006777 ORTHO05D008360 1.4e-85 319.7 170 95.3
Aa31LG9G3900 Aethionema arabicum HOM05D006777 ORTHO05D008360 1.8e-85 319.3 170 94.7
Dinv38213 Davidia involucrata HOM05D006777 ORTHO05D008360 2.3e-85 318.9 170 95.3
CiPaw.02G065600 Carya illinoinensis HOM05D006777 ORTHO05D008360 3.0e-85 318.5 170 95.3
TWI53G1099 Tripterygium wilfordii HOM05D006777 ORTHO05D008360 3.0e-85 318.5 170 94.1
CDE06G2004 Ceratophyllum demersum HOM05D006777 ORTHO05D008360 3.9e-85 318.2 170 94.1
Os03g0848300 Oryza sativa ssp. japonica HOM05D006777 ORTHO05D008360 3.9e-85 318.2 170 94.1
AUR62016205 Chenopodium quinoa HOM05D006777 ORTHO05D008360 5.2e-85 317.8 168 94.0
Medtr8g085290 Medicago truncatula HOM05D006777 ORTHO05D008360 5.2e-85 317.8 169 94.7
BcaB02g08630 Brassica carinata HOM05D006777 ORTHO05D008360 6.7e-85 317.4 170 93.5
Gohir.A02G020900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 8.8e-85 317.0 168 94.6
Gohir.D02G024900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 8.8e-85 317.0 168 94.6
Gorai.005G030800 Gossypium raimondii HOM05D006777 ORTHO05D008360 8.8e-85 317.0 168 94.6
GSVIVG01020914001 Vitis vinifera HOM05D006777 ORTHO05D008360 1.1e-84 316.6 169 94.7
Atru.chr4.1633 Acer truncatum HOM05D006777 ORTHO05D008360 1.5e-84 316.2 170 94.1
CsaV3_2G011130 Cucumis sativus L. HOM05D006777 ORTHO05D008360 1.5e-84 316.2 170 93.5
MD04G1012700 Malus domestica HOM05D006777 ORTHO05D008360 1.5e-84 316.2 170 93.5
Sed0015167 Sechium edule HOM05D006777 ORTHO05D008360 1.5e-84 316.2 170 93.5
AL7G42240 Arabidopsis lyrata HOM05D006777 ORTHO05D008360 2.0e-84 315.8 170 93.5
AT4G14147 Arabidopsis thaliana HOM05D006777 ORTHO05D008360 2.0e-84 315.8 170 93.5
Carub.0007s2827 Capsella rubella HOM05D006777 ORTHO05D008360 2.0e-84 315.8 170 93.5
Psat7g074160 Pisum sativum HOM05D006777 ORTHO05D008360 2.0e-84 315.8 167 96.4
TPR.G11902 Trifolium pratense HOM05D006777 ORTHO05D008360 2.0e-84 315.8 170 94.1
Potri.017G057400 Populus trichocarpa HOM05D006777 ORTHO05D008360 2.6e-84 315.5 170 93.5
Prupe.1G158800 Prunus persica HOM05D006777 ORTHO05D008360 2.6e-84 315.5 170 92.9
Sp7g12000 Schrenkiella parvula HOM05D006777 ORTHO05D008360 3.3e-84 315.1 170 92.9
ATR1147G041 Amborella trichopoda HOM05D006777 ORTHO05D008360 5.7e-84 314.3 170 92.9
MELO3C019533.2 Cucumis melo HOM05D006777 ORTHO05D008360 5.7e-84 314.3 170 92.4
Thhalv10026384m.g Eutrema salsugineum HOM05D006777 ORTHO05D008360 5.7e-84 314.3 170 92.9
PSO063G4325 Papaver somniferum HOM05D006777 ORTHO05D008360 5.7e-84 314.3 170 92.9
PSO017G6923 Papaver somniferum HOM05D006777 ORTHO05D008360 7.4e-84 313.9 170 92.4
FAN22G2344 Fragaria x ananassa HOM05D006777 ORTHO05D008360 1.3e-83 313.2 176 92.0
DCAR_026626 Daucus carota HOM05D006777 ORTHO05D008360 2.2e-83 312.4 168 94.0
PGR083G1334 Punica granatum HOM05D006777 ORTHO05D008360 6.3e-83 310.8 170 91.8
HPP92_006972 Vanilla planifolia HOM05D006777 ORTHO05D008360 6.3e-83 310.8 170 91.8
C04p41680 Brassica napus HOM05D006777 ORTHO05D008360 4.1e-82 308.1 169 93.5
Hund11971 Selenicereus undatus HOM05D006777 ORTHO05D008360 5.3e-82 307.8 166 92.2
arahy.Tifrunner.gnm1.ann1.QE6BNJ Arachis hypogaea HOM05D006777 ORTHO05D008360 7.0e-82 307.4 183 87.4
Nitab4.5_0000676g0120 Nicotiana tabacum HOM05D006777 ORTHO05D008360 7.0e-82 307.4 170 92.9
Aqoxy5G00004 Aquilegia oxysepala HOM05D006777 ORTHO05D008360 2.6e-81 305.4 165 92.1
arahy.Tifrunner.gnm1.ann1.GXV5N1 Arachis hypogaea HOM05D006777 ORTHO05D008360 2.6e-81 305.4 183 86.9
A04p08010 Brassica napus HOM05D006777 ORTHO05D008360 3.5e-81 305.1 169 92.3
FAN12G2838 Fragaria x ananassa HOM05D006777 ORTHO05D008360 5.9e-81 304.3 170 92.4
FAN07G2803 Fragaria x ananassa HOM05D006777 ORTHO05D008360 1.0e-80 303.5 190 85.3
Mapoly0060s0011 Marchantia polymorpha HOM05D006777 ORTHO05D008360 1.0e-80 303.5 170 88.8
Zm00001eb210820 Zea mays HOM05D006777 ORTHO05D008360 1.3e-80 303.1 188 83.5
Eucgr.H02768 Eucalyptus grandis HOM05D006777 ORTHO05D008360 2.5e-79 298.9 157 94.9
Lsat_1_v5_gn_1_72060 Lactuca sativa HOM05D006777 ORTHO05D008360 5.5e-79 297.7 157 96.2
Lalb_Chr12g0205521 Lupinus albus HOM05D006777 ORTHO05D008360 1.6e-78 296.2 168 88.1
Pp3c3_19880 Physcomitrium patens HOM05D006777 ORTHO05D008360 3.0e-77 292.0 168 86.3
SMO146G0157 Selaginella moellendorffii HOM05D006777 ORTHO05D008360 1.1e-76 290.0 167 86.2
FAN17G1701 Fragaria x ananassa HOM05D006777 ORTHO05D008360 2.6e-76 288.9 175 87.4
ClCG06G008050 Citrullus lanatus HOM05D006777 ORTHO05D008360 2.2e-75 285.8 162 89.5
AagrBONN_evm.TU.Sc2ySwM_228.5073 Anthoceros agrestis HOM05D006777 ORTHO05D008360 2.8e-75 285.4 164 88.4
MELO3C020359.2 Cucumis melo HOM05D006777 ORTHO05D008360 6.3e-75 284.3 151 94.0
unitig_37.g12031 Utricularia gibba HOM05D006777 ORTHO05D008360 6.3e-75 284.3 151 94.0
Duzib212G0541 Durio zibethinus HOM05D006777 ORTHO05D008360 8.2e-75 283.9 147 97.3
Lalb_Chr07g0186741 Lupinus albus HOM05D006777 ORTHO05D008360 1.4e-74 283.1 150 94.0
CsaV3_3G018320 Cucumis sativus L. HOM05D006777 ORTHO05D008360 7.7e-73 277.3 147 94.6
Sabra17G0050600 Salix brachista HOM05D006777 ORTHO05D008360 2.5e-71 272.3 147 93.2
Actinidia35856 Actinidia chinensis HOM05D006777 ORTHO05D008360 1.2e-70 270.0 140 95.7
BolC4t25746H Brassica oleracea HOM05D006777 ORTHO05D008360 3.6e-70 268.5 139 96.4
CBR_g4477 Chara braunii HOM05D006777 ORTHO05D008360 1.0e-69 266.9 169 76.9
Nn1g07943 Nelumbo nucifera HOM05D006777 ORTHO05D008360 1.4e-69 266.5 140 95.0
BraA04t16489Z Brassica rapa HOM05D006777 ORTHO05D008360 3.0e-69 265.4 139 95.0
Peaxi162Scf00652g00116 Petunia axillaris HOM05D006777 ORTHO05D008360 8.8e-69 263.8 170 82.4
Hma1.2p1_0187F.1_g082390 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 1.5e-68 263.1 139 95.0
SGA_v2.0_scaffold14G07057 Striga asiatica HOM05D006777 ORTHO05D008360 4.4e-68 261.5 262 59.9
Nitab4.5_0000850g0170 Nicotiana tabacum HOM05D006777 ORTHO05D008360 1.8e-66 256.1 164 82.3
COL.COLO4_20174 Corchorus olitorius HOM05D001598 ORTHO05D002757 8.5e-64 247.3 128 97.7
Dinv27219 Davidia involucrata HOM05D006777 ORTHO05D008360 3.2e-63 245.4 170 78.8
AUR62039283 Chenopodium quinoa HOM05D006777 ORTHO05D008360 9.5e-63 243.8 168 77.4
EL10Ac3g05505 Beta vulgaris HOM05D006777 ORTHO05D008360 1.2e-62 243.4 170 76.5
PGSC0003DMG402004570 Solanum tuberosum HOM05D006777 ORTHO05D008360 1.2e-62 243.4 130 96.2
Haze_11625 Corylus avellana HOM05D006777 ORTHO05D008360 4.9e-59 231.5 229 62.0
SGA_v2.0_scaffold4G02170 Striga asiatica HOM05D006777 ORTHO05D008360 1.8e-58 229.6 233 60.1
Lj6A528G35 Lonicera japonica HOM05D006777 ORTHO05D008360 4.1e-58 228.4 125 94.4
CSS0009293 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 7.7e-57 224.2 120 95.8
CSS0028561 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 7.7e-57 224.2 120 95.8
SHI07424 Sapria himalayana HOM05D006777 ORTHO05D008360 1.7e-56 223.0 129 86.8
CARHR220180 Cardamine hirsuta HOM05D006777 ORTHO05D008360 1.7e-51 206.5 110 94.5
Haze_27630 Corylus avellana HOM05D006777 ORTHO05D008360 2.2e-51 206.1 169 61.5
Hma1.2p1_0187F.1_g082380 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 3.7e-51 205.3 109 95.4
Cre06.g260800 Chlamydomonas reinhardtii HOM05D006777 ORTHO05D008360 4.4e-44 181.8 176 54.5
QL06p026356 Quercus lobata HOM05D000003 ORTHO05D008360 9.8e-44 180.6 115 81.7
Hund03125 Selenicereus undatus HOM05D006777 ORTHO05D008360 6.0e-41 171.4 170 58.8
vmacro00459 Vaccinium macrocarpon HOM05D006777 ORTHO05D008360 1.9e-34 149.8 117 69.2
ECA248G0011 Erigeron canadensis HOM05D006777 ORTHO05D008360 1.6e-33 146.7 75 98.7
CAN.G767.6 Capsicum annuum HOM05D006777 ORTHO05D008360 6.0e-33 144.8 75 96.0
Sed0006533 Sechium edule HOM05D006777 ORTHO05D008360 1.3e-32 143.7 76 92.1
Lj3P402T13 Lonicera japonica HOM05D006777 ORTHO05D008360 9.2e-26 120.9 73 80.8
Cpa.g.c27575.2 Carica papaya HOM05D006777 ORTHO05D008360 6.6e-24 114.8 60 91.7
Cc00_g31310 Coffea canephora HOM05D006777 ORTHO05D008360 8.6e-24 114.4 69 87.0
Cc03_g11170 Coffea canephora HOM05D006777 ORTHO05D008360 3.8e-19 99.0 50 94.0
CSS0011736 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 2.0e-12 76.6 38 86.8
CSS0009674 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 5.4e-10 68.6 39 79.5
Lj3A409T19 Lonicera japonica HOM05D006777 ORTHO05D008360 2.5e-07 59.7 59 59.3


User provided reference genes

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