Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G00614 Erythranthe guttata HOM05D006670 ORTHO05D008715 1.0e-154 550.1 285 100.0
MSTRG.4202 Avicennia marina HOM05D006670 ORTHO05D008715 5.0e-109 398.3 292 71.2
SGA_v2.0_scaffold57G20164 Striga asiatica HOM05D006670 ORTHO05D008715 2.5e-108 396.0 271 74.9
Sopen05g031980 Solanum pennellii HOM05D006670 ORTHO05D008715 2.3e-101 372.9 270 72.2
Dinv27152 Davidia involucrata HOM05D006670 ORTHO05D008715 1.9e-100 369.8 281 69.8
COL.COLO4_05724 Corchorus olitorius HOM05D006670 ORTHO05D008715 4.3e-100 368.6 273 71.4
Peaxi162Scf00536g00711 Petunia axillaris HOM05D006670 ORTHO05D008715 4.3e-100 368.6 270 70.7
Thecc.04G214700 Theobroma cacao HOM05D006670 ORTHO05D008715 2.1e-99 366.3 273 70.0
Duzib212G0230 Durio zibethinus HOM05D006670 ORTHO05D008715 4.7e-99 365.2 273 69.6
Gorai.011G163000 Gossypium raimondii HOM05D006670 ORTHO05D008715 3.1e-98 362.5 273 68.5
HanXRQChr01g0022661 Helianthus annuus HOM05D006670 ORTHO05D008715 6.8e-98 361.3 273 67.4
DCAR_024309 Daucus carota HOM05D006670 ORTHO05D008715 8.9e-98 360.9 277 70.0
Gohir.D10G145900 Gossypium hirsutum HOM05D006670 ORTHO05D008715 8.9e-98 360.9 273 68.1
CiPaw.01G205600 Carya illinoinensis HOM05D006670 ORTHO05D008715 1.2e-97 360.5 277 68.6
MD13G1229700 Malus domestica HOM05D006670 ORTHO05D008715 2.6e-97 359.4 278 69.1
Rhsim09G0046600 Rhododendron simsii HOM05D006670 ORTHO05D008715 3.4e-97 359.0 281 67.6
Gohir.A10G120500 Gossypium hirsutum HOM05D006670 ORTHO05D008715 1.7e-96 356.7 273 67.4
CANSAT78G1187 Cannabis sativa HOM05D006670 ORTHO05D008715 4.9e-96 355.1 281 66.9
CSS0047689 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 6.4e-96 354.8 281 65.8
Rhsim09G0047600 Rhododendron simsii HOM05D006670 ORTHO05D008715 8.3e-96 354.4 281 65.8
Ciclev10005609m.g Citrus clementina HOM05D006670 ORTHO05D008715 1.1e-95 354.0 263 68.1
QL06p022765 Quercus lobata HOM05D006670 ORTHO05D008715 1.1e-95 354.0 279 66.7
Prupe.1G056900 Prunus persica HOM05D006670 ORTHO05D008715 1.4e-95 353.6 275 66.9
RcHm_v2.0_Chr4g0396631 Rosa chinensis HOM05D006670 ORTHO05D008715 1.4e-95 353.6 281 66.5
Haze_11539 Corylus avellana HOM05D006670 ORTHO05D008715 7.0e-95 351.3 281 67.3
MELO3C006346.2 Cucumis melo HOM05D006670 ORTHO05D008715 7.0e-95 351.3 276 66.7
Sc13g0002920 Simmondsia chinensis HOM05D006670 ORTHO05D008715 9.2e-95 350.9 271 66.4
Ah.04g153360 Amaranthus hybridus HOM05D006670 ORTHO05D008715 1.2e-94 350.5 283 66.1
ECA248G0542 Erigeron canadensis HOM05D006670 ORTHO05D008715 2.1e-94 349.7 281 63.3
ClCG05G003670 Citrullus lanatus HOM05D006670 ORTHO05D008715 2.7e-94 349.4 280 65.4
CsaV3_3G011380 Cucumis sativus L. HOM05D006670 ORTHO05D008715 2.7e-94 349.4 277 66.1
Sabra03G0127900 Salix brachista HOM05D006670 ORTHO05D008715 2.7e-94 349.4 283 65.4
CSS0048127 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 3.5e-94 349.0 284 64.4
Potri.003G174400 Populus trichocarpa HOM05D006670 ORTHO05D008715 3.5e-94 349.0 283 65.7
FAN22G1637 Fragaria x ananassa HOM05D006670 ORTHO05D008715 4.6e-94 348.6 273 65.9
Lsat_1_v5_gn_0_4721 Lactuca sativa HOM05D006670 ORTHO05D008715 4.6e-94 348.6 273 65.2
FvH4_4g05510 Fragaria vesca HOM05D006670 ORTHO05D008715 1.7e-93 346.7 273 65.9
Manes.15G049800 Manihot esculenta HOM05D006670 ORTHO05D008715 2.3e-93 346.3 268 66.4
Hund24851 Selenicereus undatus HOM05D006670 ORTHO05D008715 2.3e-93 346.3 284 63.0
Cfa014868 Carpinus fangiana HOM05D006670 ORTHO05D008715 3.0e-93 345.9 281 65.8
Sed0004390 Sechium edule HOM05D006670 ORTHO05D008715 6.6e-93 344.7 277 65.0
CARHR100200 Cardamine hirsuta HOM05D006670 ORTHO05D008715 8.6e-93 344.4 266 65.8
AUR62035928 Chenopodium quinoa HOM05D006670 ORTHO05D008715 8.6e-93 344.4 276 65.6
PGR083G1840 Punica granatum HOM05D006670 ORTHO05D008715 8.6e-93 344.4 266 69.2
FAN07G0632 Fragaria x ananassa HOM05D006670 ORTHO05D008715 1.1e-92 344.0 273 65.6
Manes.03G154700 Manihot esculenta HOM05D006670 ORTHO05D008715 1.5e-92 343.6 285 65.6
Thhalv10002635m.g Eutrema salsugineum HOM05D006670 ORTHO05D008715 2.5e-92 342.8 266 65.4
FAN12G2738 Fragaria x ananassa HOM05D006670 ORTHO05D008715 4.3e-92 342.0 273 65.2
A07p08240 Brassica napus HOM05D006670 ORTHO05D008715 5.6e-92 341.7 269 64.3
BcaB06g26594 Brassica carinata HOM05D006670 ORTHO05D008715 9.5e-92 340.9 269 64.7
AUR62035321 Chenopodium quinoa HOM05D006670 ORTHO05D008715 9.5e-92 340.9 276 64.9
BolC7t41764H Brassica oleracea HOM05D006670 ORTHO05D008715 1.6e-91 340.1 269 63.6
TAR636G1307 Trochodendron aralioides HOM05D006670 ORTHO05D008715 1.6e-91 340.1 285 64.6
Aqoxy2G03824 Aquilegia oxysepala HOM05D006670 ORTHO05D008715 8.1e-91 337.8 284 63.4
AT3G24030 Arabidopsis thaliana HOM05D006670 ORTHO05D008715 1.4e-90 337.0 266 65.0
AL3G39350 Arabidopsis lyrata HOM05D006670 ORTHO05D008715 1.8e-90 336.7 266 65.0
BraA07t28607Z Brassica rapa HOM05D006670 ORTHO05D008715 3.1e-90 335.9 269 63.2
unitig_747.g21700 Utricularia gibba HOM05D006670 ORTHO05D008715 3.1e-90 335.9 396 49.5
BcaC06g35628 Brassica carinata HOM05D006670 ORTHO05D008715 4.0e-90 335.5 269 62.8
C07p12780 Brassica napus HOM05D006670 ORTHO05D008715 4.0e-90 335.5 269 62.8
Carub.0003s2449 Capsella rubella HOM05D006670 ORTHO05D008715 6.8e-90 334.7 266 65.4
PSO063G6527 Papaver somniferum HOM05D006670 ORTHO05D008715 1.2e-89 334.0 280 62.1
Sp3g21930 Schrenkiella parvula HOM05D006670 ORTHO05D008715 1.2e-89 334.0 266 64.7
vmacro00519 Vaccinium macrocarpon HOM05D006670 ORTHO05D008715 1.2e-89 334.0 333 56.5
Cpa.g.sc59.72 Carica papaya HOM05D006670 ORTHO05D008715 3.4e-89 332.4 260 65.4
PGSC0003DMG400027217 Solanum tuberosum HOM05D006670 ORTHO05D008715 4.4e-89 332.0 243 72.8
Phvul.007G238000 Phaseolus vulgaris HOM05D006670 ORTHO05D008715 7.5e-89 331.3 273 64.1
VMungo0720G2028 Vigna mungo HOM05D006670 ORTHO05D008715 7.5e-89 331.3 275 63.3
PSO017G1158 Papaver somniferum HOM05D006670 ORTHO05D008715 2.9e-88 329.3 280 62.1
Nitab4.5_0001769g0060 Nicotiana tabacum HOM05D006670 ORTHO05D008715 1.9e-87 326.6 277 64.3
THA.LOC104808732 Tarenaya hassleriana HOM05D006670 ORTHO05D008715 3.2e-87 325.9 256 66.4
Nitab4.5_0012036g0010 Nicotiana tabacum HOM05D006670 ORTHO05D008715 4.1e-87 325.5 277 64.3
MBI10_g16834_MAGBIO Magnolia biondii HOM05D006670 ORTHO05D008715 5.4e-87 325.1 273 61.9
Psat6g047400 Pisum sativum HOM05D006670 ORTHO05D008715 7.1e-87 324.7 266 63.9
arahy.Tifrunner.gnm1.ann1.CI907D Arachis hypogaea HOM05D006670 ORTHO05D008715 9.2e-87 324.3 271 62.4
ATR0787G198 Amborella trichopoda HOM05D006670 ORTHO05D008715 1.6e-86 323.6 281 60.5
Atru.chr4.1814 Acer truncatum HOM05D006670 ORTHO05D008715 3.5e-86 322.4 274 63.1
Lalb_Chr01g0011161 Lupinus albus HOM05D006670 ORTHO05D008715 3.5e-86 322.4 266 64.3
arahy.Tifrunner.gnm1.ann1.M1QCRY Arachis hypogaea HOM05D006670 ORTHO05D008715 4.6e-86 322.0 271 62.0
Glyma.10G127400 Glycine max HOM05D006670 ORTHO05D008715 7.8e-86 321.2 284 61.3
Ca_11808_v3 Cicer arietinum L. HOM05D006670 ORTHO05D008715 3.0e-85 319.3 268 63.8
Lj6g0025132 Lotus japonicus HOM05D006670 ORTHO05D008715 3.0e-85 319.3 274 60.9
Eucgr.H02870 Eucalyptus grandis HOM05D006670 ORTHO05D008715 6.6e-85 318.2 275 62.2
TPR.G11296 Trifolium pratense HOM05D006670 ORTHO05D008715 6.6e-85 318.2 279 61.3
Cc03_g07080 Coffea canephora HOM05D006670 ORTHO05D008715 4.3e-84 315.5 223 73.1
Lju414A3G25 Lonicera japonica HOM05D006670 ORTHO05D008715 4.3e-84 315.5 239 70.3
Oeu022324.1 Olea europaea HOM05D006670 ORTHO05D008715 2.1e-83 313.2 243 67.5
Actinidia25088 Actinidia chinensis HOM05D006670 ORTHO05D008715 4.7e-83 312.0 246 66.3
SEGI_39672 Sequoiadendron giganteum HOM05D006670 ORTHO05D008715 6.2e-83 311.6 271 59.4
SHI00002 Sapria himalayana HOM05D006670 ORTHO05D008715 1.1e-82 310.8 296 58.1
Mapoly0087s0052 Marchantia polymorpha HOM05D006670 ORTHO05D008715 5.2e-82 308.5 277 59.6
Pp3c9_10780 Physcomitrium patens HOM05D006670 ORTHO05D008715 6.8e-82 308.1 277 58.5
Zm00001eb341310 Zea mays HOM05D006670 ORTHO05D008715 8.9e-82 307.8 275 60.4
Medtr1g046510 Medicago truncatula HOM05D006670 ORTHO05D008715 1.5e-81 307.0 277 59.9
Medtr1g046790 Medicago truncatula HOM05D006670 ORTHO05D008715 1.5e-81 307.0 283 59.0
SMO137G0262 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 9.9e-81 304.3 263 63.5
Nn3g19866 Nelumbo nucifera HOM05D006670 ORTHO05D008715 4.6e-78 295.4 232 68.1
CDE01G0405 Ceratophyllum demersum HOM05D007853 ORTHO05D009873 2.3e-77 293.1 235 63.8
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 1.9e-76 290.0 256 59.8
GSVIVG01029032001 Vitis vinifera HOM05D006670 ORTHO05D008715 9.9e-73 277.7 223 65.0
RhsimUnG0181700 Rhododendron simsii HOM05D006670 ORTHO05D008715 1.7e-72 276.9 281 54.8
SMO134G0250 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 5.6e-68 261.9 279 53.4
EL10Ac3g06772 Beta vulgaris HOM05D006670 ORTHO05D008715 3.4e-65 252.7 237 58.2
Cre06.g255350 Chlamydomonas reinhardtii HOM05D006670 ORTHO05D008715 1.2e-62 244.2 279 52.0
CAN.G305.17 Capsicum annuum HOM05D006670 ORTHO05D008715 3.5e-54 216.1 154 70.1
Psat7g020640 Pisum sativum HOM05D006670 ORTHO05D008715 6.7e-53 211.8 185 63.8
Dinv44414 Davidia involucrata HOM05D006670 ORTHO05D008715 1.3e-51 207.6 151 72.2
Migut.G00612 Erythranthe guttata HOM05D006670 ORTHO05D008715 2.8e-51 206.5 131 85.5
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.2e-47 192.6 153 62.1
Psat4g139560 Pisum sativum HOM05D006670 ORTHO05D000720 4.6e-46 189.1 222 49.5
Os01g0363600 Oryza sativa ssp. japonica HOM05D006670 ORTHO05D008715 2.6e-41 173.3 147 57.1
Psat0s5229g0080 Pisum sativum HOM05D006670 ORTHO05D006513 5.0e-40 169.1 217 45.2
Lju414A3G24 Lonicera japonica HOM05D006670 ORTHO05D008715 9.4e-39 164.9 181 54.7
CAN.G305.16 Capsicum annuum HOM05D006670 ORTHO05D008715 7.4e-36 155.2 133 66.2
Potri.001G053900 Populus trichocarpa HOM05D006670 ORTHO05D008715 5.9e-33 145.6 121 62.8
Psat4g139640 Pisum sativum HOM05D006670 ORTHO05D002176 1.3e-32 144.4 152 57.2
Lsat_1_v5_gn_5_180420 Lactuca sativa HOM05D006670 ORTHO05D008715 2.2e-27 127.1 101 63.4
Sabra01G0038200 Salix brachista HOM05D006670 ORTHO05D349611 1.2e-25 121.3 221 40.3
Cfa024720 Carpinus fangiana HOM05D005536 ORTHO05D006999 8.5e-24 115.2 251 33.5
PGSC0003DMG402027165 Solanum tuberosum HOM05D006670 ORTHO05D008715 3.0e-21 106.7 81 70.4
FAN17G2931 Fragaria x ananassa HOM05D006670 ORTHO05D008715 1.7e-16 90.9 77 64.9
Cpa.g.sc59.70 Carica papaya HOM05D006670 ORTHO05D119377 5.3e-10 69.3 111 39.6


User provided reference genes

Program Settings