Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G00612 Erythranthe guttata HOM05D006670 ORTHO05D008715 8.5e-58 226.9 121 100.0
Migut.G00614 Erythranthe guttata HOM05D006670 ORTHO05D008715 1.6e-51 206.1 131 85.5
vmacro00519 Vaccinium macrocarpon HOM05D006670 ORTHO05D008715 4.7e-32 141.4 133 63.2
Sc13g0002920 Simmondsia chinensis HOM05D006670 ORTHO05D008715 8.0e-32 140.6 130 63.8
HanXRQChr01g0022661 Helianthus annuus HOM05D006670 ORTHO05D008715 4.0e-31 138.3 133 61.7
Rhsim09G0046600 Rhododendron simsii HOM05D006670 ORTHO05D008715 4.0e-31 138.3 128 63.3
CiPaw.01G205600 Carya illinoinensis HOM05D006670 ORTHO05D008715 1.5e-30 136.3 133 63.9
Rhsim09G0047600 Rhododendron simsii HOM05D006670 ORTHO05D008715 2.0e-30 136.0 133 60.2
QL06p022765 Quercus lobata HOM05D006670 ORTHO05D008715 2.6e-30 135.6 132 61.4
Ah.04g153360 Amaranthus hybridus HOM05D006670 ORTHO05D008715 3.4e-30 135.2 133 60.2
Dinv27152 Davidia involucrata HOM05D006670 ORTHO05D008715 3.4e-30 135.2 133 61.7
FAN22G1637 Fragaria x ananassa HOM05D006670 ORTHO05D008715 9.8e-30 133.7 133 59.4
RcHm_v2.0_Chr4g0396631 Rosa chinensis HOM05D006670 ORTHO05D008715 9.8e-30 133.7 133 60.9
Duzib212G0230 Durio zibethinus HOM05D006670 ORTHO05D008715 1.7e-29 132.9 128 62.5
Gohir.D10G145900 Gossypium hirsutum HOM05D006670 ORTHO05D008715 2.2e-29 132.5 128 61.7
Gorai.011G163000 Gossypium raimondii HOM05D006670 ORTHO05D008715 2.2e-29 132.5 128 61.7
CSS0047689 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 2.9e-29 132.1 133 60.9
CANSAT78G1187 Cannabis sativa HOM05D006670 ORTHO05D008715 2.9e-29 132.1 128 62.5
unitig_747.g21700 Utricularia gibba HOM05D006670 ORTHO05D008715 2.9e-29 132.1 131 60.3
Lju414A3G25 Lonicera japonica HOM05D006670 ORTHO05D008715 3.7e-29 131.7 133 61.7
MD13G1229700 Malus domestica HOM05D006670 ORTHO05D008715 3.7e-29 131.7 133 61.7
Nn3g19866 Nelumbo nucifera HOM05D006670 ORTHO05D008715 3.7e-29 131.7 133 60.9
Thecc.04G214700 Theobroma cacao HOM05D006670 ORTHO05D008715 3.7e-29 131.7 128 62.5
Aqoxy2G03824 Aquilegia oxysepala HOM05D006670 ORTHO05D008715 4.9e-29 131.3 133 59.4
MSTRG.4202 Avicennia marina HOM05D006670 ORTHO05D008715 6.4e-29 131.0 131 60.3
ECA248G0542 Erigeron canadensis HOM05D006670 ORTHO05D008715 6.4e-29 131.0 128 59.4
FAN07G0632 Fragaria x ananassa HOM05D006670 ORTHO05D008715 6.4e-29 131.0 133 59.4
Prupe.1G056900 Prunus persica HOM05D006670 ORTHO05D008715 8.3e-29 130.6 133 58.6
BcaB06g26594 Brassica carinata HOM05D006670 ORTHO05D008715 1.1e-28 130.2 128 59.4
FvH4_4g05510 Fragaria vesca HOM05D006670 ORTHO05D008715 1.1e-28 130.2 133 59.4
FAN12G2738 Fragaria x ananassa HOM05D006670 ORTHO05D008715 1.1e-28 130.2 133 59.4
Actinidia25088 Actinidia chinensis HOM05D006670 ORTHO05D008715 1.4e-28 129.8 131 59.5
AUR62035928 Chenopodium quinoa HOM05D006670 ORTHO05D008715 1.8e-28 129.4 133 57.9
Potri.003G174400 Populus trichocarpa HOM05D006670 ORTHO05D008715 1.8e-28 129.4 131 58.8
A07p08240 Brassica napus HOM05D006670 ORTHO05D008715 2.4e-28 129.0 128 60.2
AUR62035321 Chenopodium quinoa HOM05D006670 ORTHO05D008715 2.4e-28 129.0 133 57.9
Lsat_1_v5_gn_0_4721 Lactuca sativa HOM05D006670 ORTHO05D008715 2.4e-28 129.0 133 57.9
PSO063G6527 Papaver somniferum HOM05D006670 ORTHO05D008715 3.2e-28 128.6 132 57.6
Sabra03G0127900 Salix brachista HOM05D006670 ORTHO05D008715 3.2e-28 128.6 126 60.3
Cc03_g07080 Coffea canephora HOM05D006670 ORTHO05D008715 4.1e-28 128.3 128 60.9
Manes.03G154700 Manihot esculenta HOM05D006670 ORTHO05D008715 4.1e-28 128.3 128 60.2
TAR636G1307 Trochodendron aralioides HOM05D006670 ORTHO05D008715 4.1e-28 128.3 131 59.5
CSS0048127 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 5.4e-28 127.9 133 59.4
Sed0004390 Sechium edule HOM05D006670 ORTHO05D008715 5.4e-28 127.9 128 60.2
MELO3C006346.2 Cucumis melo HOM05D006670 ORTHO05D008715 7.0e-28 127.5 132 57.6
ClCG05G003670 Citrullus lanatus HOM05D006670 ORTHO05D008715 9.2e-28 127.1 131 58.0
DCAR_024309 Daucus carota HOM05D006670 ORTHO05D008715 9.2e-28 127.1 128 60.2
Gohir.A10G120500 Gossypium hirsutum HOM05D006670 ORTHO05D008715 9.2e-28 127.1 128 59.4
Manes.15G049800 Manihot esculenta HOM05D006670 ORTHO05D008715 9.2e-28 127.1 128 59.4
Hund24851 Selenicereus undatus HOM05D006670 ORTHO05D008715 9.2e-28 127.1 133 57.1
BolC7t41764H Brassica oleracea HOM05D006670 ORTHO05D008715 1.2e-27 126.7 128 59.4
Haze_11539 Corylus avellana HOM05D006670 ORTHO05D008715 1.2e-27 126.7 132 58.3
SGA_v2.0_scaffold57G20164 Striga asiatica HOM05D006670 ORTHO05D008715 1.2e-27 126.7 128 59.4
BraA07t28607Z Brassica rapa HOM05D006670 ORTHO05D008715 1.6e-27 126.3 128 58.6
CAN.G305.16 Capsicum annuum HOM05D006670 ORTHO05D008715 1.6e-27 126.3 131 58.8
COL.COLO4_05724 Corchorus olitorius HOM05D006670 ORTHO05D008715 1.6e-27 126.3 128 60.9
Thhalv10002635m.g Eutrema salsugineum HOM05D006670 ORTHO05D008715 1.6e-27 126.3 128 58.6
AL3G39350 Arabidopsis lyrata HOM05D006670 ORTHO05D008715 2.0e-27 125.9 133 56.4
CsaV3_3G011380 Cucumis sativus L. HOM05D006670 ORTHO05D008715 2.0e-27 125.9 131 57.3
Lju414A3G24 Lonicera japonica HOM05D006670 ORTHO05D008715 2.0e-27 125.9 133 59.4
Eucgr.H02870 Eucalyptus grandis HOM05D006670 ORTHO05D008715 2.7e-27 125.6 131 58.8
PSO017G1158 Papaver somniferum HOM05D006670 ORTHO05D008715 2.7e-27 125.6 132 57.6
GSVIVG01029032001 Vitis vinifera HOM05D006670 ORTHO05D008715 2.7e-27 125.6 133 57.9
CARHR100200 Cardamine hirsuta HOM05D006670 ORTHO05D008715 3.5e-27 125.2 128 57.0
PGR083G1840 Punica granatum HOM05D006670 ORTHO05D008715 3.5e-27 125.2 133 58.6
PGSC0003DMG400027217 Solanum tuberosum HOM05D006670 ORTHO05D008715 4.6e-27 124.8 131 58.0
BcaC06g35628 Brassica carinata HOM05D006670 ORTHO05D008715 5.9e-27 124.4 128 57.8
C07p12780 Brassica napus HOM05D006670 ORTHO05D008715 5.9e-27 124.4 128 57.8
Cfa014868 Carpinus fangiana HOM05D006670 ORTHO05D008715 5.9e-27 124.4 128 59.4
Lj6g0025132 Lotus japonicus HOM05D006670 ORTHO05D008715 7.8e-27 124.0 128 59.4
Lalb_Chr01g0011161 Lupinus albus HOM05D006670 ORTHO05D008715 7.8e-27 124.0 133 57.9
Cpa.g.sc59.72 Carica papaya HOM05D006670 ORTHO05D008715 1.3e-26 123.2 133 56.4
Sopen05g031980 Solanum pennellii HOM05D006670 ORTHO05D008715 1.3e-26 123.2 131 58.0
MBI10_g16834_MAGBIO Magnolia biondii HOM05D006670 ORTHO05D008715 1.7e-26 122.9 133 57.9
Carub.0003s2449 Capsella rubella HOM05D006670 ORTHO05D008715 2.3e-26 122.5 128 57.8
Ciclev10005609m.g Citrus clementina HOM05D006670 ORTHO05D008715 2.3e-26 122.5 119 60.5
Ca_11808_v3 Cicer arietinum L. HOM05D006670 ORTHO05D008715 3.0e-26 122.1 129 59.7
Peaxi162Scf00536g00711 Petunia axillaris HOM05D006670 ORTHO05D008715 3.0e-26 122.1 131 57.3
arahy.Tifrunner.gnm1.ann1.CI907D Arachis hypogaea HOM05D006670 ORTHO05D008715 5.0e-26 121.3 133 56.4
arahy.Tifrunner.gnm1.ann1.M1QCRY Arachis hypogaea HOM05D006670 ORTHO05D008715 5.0e-26 121.3 133 56.4
Phvul.007G238000 Phaseolus vulgaris HOM05D006670 ORTHO05D008715 5.0e-26 121.3 128 58.6
THA.LOC104808732 Tarenaya hassleriana HOM05D006670 ORTHO05D008715 6.6e-26 120.9 122 59.0
Psat6g047400 Pisum sativum HOM05D006670 ORTHO05D008715 8.6e-26 120.6 128 58.6
ATR0787G198 Amborella trichopoda HOM05D006670 ORTHO05D008715 1.5e-25 119.8 131 54.2
AT3G24030 Arabidopsis thaliana HOM05D006670 ORTHO05D008715 1.5e-25 119.8 128 55.5
Nitab4.5_0012036g0010 Nicotiana tabacum HOM05D006670 ORTHO05D008715 1.5e-25 119.8 128 58.6
VMungo0720G2028 Vigna mungo HOM05D006670 ORTHO05D008715 1.5e-25 119.8 133 55.6
Nitab4.5_0001769g0060 Nicotiana tabacum HOM05D006670 ORTHO05D008715 2.5e-25 119.0 128 58.6
Sp3g21930 Schrenkiella parvula HOM05D006670 ORTHO05D008715 3.3e-25 118.6 128 56.2
Glyma.10G127400 Glycine max HOM05D006670 ORTHO05D008715 4.3e-25 118.2 128 56.2
Pp3c9_10780 Physcomitrium patens HOM05D006670 ORTHO05D008715 4.3e-25 118.2 131 54.2
SHI00002 Sapria himalayana HOM05D006670 ORTHO05D008715 7.3e-25 117.5 130 54.6
Medtr1g046510 Medicago truncatula HOM05D006670 ORTHO05D008715 1.2e-24 116.7 128 56.2
SEGI_39672 Sequoiadendron giganteum HOM05D006670 ORTHO05D008715 1.6e-24 116.3 128 53.9
TPR.G11296 Trifolium pratense HOM05D006670 ORTHO05D008715 1.6e-24 116.3 128 56.2
SMO137G0262 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 2.8e-24 115.5 134 56.7
Mapoly0087s0052 Marchantia polymorpha HOM05D006670 ORTHO05D008715 6.2e-24 114.4 131 54.2
Potri.001G053900 Populus trichocarpa HOM05D006670 ORTHO05D008715 6.2e-24 114.4 117 55.6
Medtr1g046790 Medicago truncatula HOM05D006670 ORTHO05D008715 1.0e-23 113.6 128 55.5
Zm00001eb341310 Zea mays HOM05D006670 ORTHO05D008715 7.5e-22 107.5 128 53.1
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 6.4e-21 104.4 118 55.9
Atru.chr4.1814 Acer truncatum HOM05D006670 ORTHO05D008715 1.1e-20 103.6 135 53.3
RhsimUnG0181700 Rhododendron simsii HOM05D006670 ORTHO05D008715 1.1e-20 103.6 105 57.1
Oeu022324.1 Olea europaea HOM05D006670 ORTHO05D008715 5.4e-20 101.3 131 51.1
Lsat_1_v5_gn_5_180420 Lactuca sativa HOM05D006670 ORTHO05D008715 5.0e-18 94.7 117 51.3
PGSC0003DMG402027165 Solanum tuberosum HOM05D006670 ORTHO05D008715 3.3e-17 92.0 76 63.2
SMO134G0250 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 4.3e-17 91.7 133 45.9
Cre06.g255350 Chlamydomonas reinhardtii HOM05D006670 ORTHO05D008715 4.7e-16 88.2 130 49.2
CDE01G0405 Ceratophyllum demersum HOM05D007853 ORTHO05D009873 1.1e-15 87.0 111 53.2
FAN17G2931 Fragaria x ananassa HOM05D006670 ORTHO05D008715 1.5e-14 83.2 73 64.4
Psat0s5229g0080 Pisum sativum HOM05D006670 ORTHO05D006513 2.7e-11 72.4 110 43.6
EL10Ac3g06772 Beta vulgaris HOM05D006670 ORTHO05D008715 1.2e-08 63.5 40 82.5
Psat4g139560 Pisum sativum HOM05D006670 ORTHO05D000720 1.4e-07 60.1 99 42.4
Psat7g020640 Pisum sativum HOM05D006670 ORTHO05D008715 1.8e-07 59.7 74 56.8
Psat4g139640 Pisum sativum HOM05D006670 ORTHO05D002176 7.6e-06 54.3 74 54.1


User provided reference genes

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