Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G00600 Erythranthe guttata HOM05D003628 ORTHO05D004253 0.0e+00 1365.1 756 100.0
MSTRG.4198 Avicennia marina HOM05D003628 ORTHO05D004253 2.2e-212 743.0 781 60.7
SGA_v2.0_scaffold57G20181 Striga asiatica HOM05D003628 ORTHO05D004253 5.3e-174 615.5 744 55.0
Peaxi162Scf01007g00014 Petunia axillaris HOM05D003628 ORTHO05D004253 2.6e-152 543.5 808 47.4
Nitab4.5_0002738g0080 Nicotiana tabacum HOM05D003628 ORTHO05D004253 7.7e-149 531.9 810 48.1
Nitab4.5_0001998g0040 Nicotiana tabacum HOM05D003628 ORTHO05D004253 1.2e-146 524.6 809 48.0
Sopen12g032860 Solanum pennellii HOM05D003628 ORTHO05D004253 1.3e-143 514.6 809 47.5
Cc03_g07010 Coffea canephora HOM05D003628 ORTHO05D004253 4.9e-143 512.7 791 49.2
Solyc12g097070.3 Solanum lycopersicum HOM05D003628 ORTHO05D004253 4.9e-143 512.7 807 47.2
Dinv27142 Davidia involucrata HOM05D003628 ORTHO05D004253 5.4e-142 509.2 831 47.9
Hma1.2p1_1241F.1_g269760 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 1.0e-140 505.0 814 46.6
GSVIVG01029001001 Vitis vinifera HOM05D003628 ORTHO05D004253 4.7e-138 496.1 821 47.0
QL06p022355 Quercus lobata HOM05D003628 ORTHO05D004253 1.8e-137 494.2 818 47.4
CAN.G566.2 Capsicum annuum HOM05D003628 ORTHO05D004253 1.2e-136 491.5 783 46.7
Atru.chr4.1847 Acer truncatum HOM05D003628 ORTHO05D004253 3.6e-130 469.9 838 45.8
Dinv29776 Davidia involucrata HOM05D003628 ORTHO05D004253 1.0e-129 468.4 629 53.6
Potri.010G062000 Populus trichocarpa HOM05D003628 ORTHO05D004253 1.8e-129 467.6 814 45.8
Actinidia39943 Actinidia chinensis HOM05D003628 ORTHO05D004253 4.9e-127 459.5 815 45.6
Manes.15G048200 Manihot esculenta HOM05D003628 ORTHO05D004253 6.4e-127 459.1 804 44.5
Glyma.20G079600 Glycine max HOM05D003628 ORTHO05D004253 8.3e-127 458.8 795 44.8
Peaxi162Scf00047g00163 Petunia axillaris HOM05D003628 ORTHO05D004253 5.4e-126 456.1 787 45.9
Nitab4.5_0000451g0120 Nicotiana tabacum HOM05D003628 ORTHO05D004253 1.7e-124 451.1 794 45.3
Hma1.2p1_0574F.1_g181510 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 8.6e-124 448.7 447 61.5
Gorai.011G164000 Gossypium raimondii HOM05D003628 ORTHO05D004253 2.5e-123 447.2 811 44.1
Solyc09g091120.3 Solanum lycopersicum HOM05D003628 ORTHO05D004253 7.3e-123 445.7 814 44.5
CANSAT78G2050 Cannabis sativa HOM05D003628 ORTHO05D004253 6.8e-121 439.1 830 44.7
Gohir.D10G146700 Gossypium hirsutum HOM05D003628 ORTHO05D004253 6.8e-121 439.1 811 43.6
Ca_11787_v3 Cicer arietinum L. HOM05D003628 ORTHO05D004253 5.8e-120 436.0 828 43.4
CiPaw.01G174500 Carya illinoinensis HOM05D003628 ORTHO05D004253 9.8e-120 435.3 809 44.0
Nn1g03063 Nelumbo nucifera HOM05D003628 ORTHO05D004253 3.7e-119 433.3 835 42.2
TWI09G0941 Tripterygium wilfordii HOM05D003628 ORTHO05D004253 1.7e-116 424.5 818 43.5
arahy.Tifrunner.gnm1.ann1.STBA65 Arachis hypogaea HOM05D003628 ORTHO05D004253 2.3e-116 424.1 808 41.7
Manes.03G155400 Manihot esculenta HOM05D003628 ORTHO05D004253 8.6e-116 422.2 802 44.0
Gohir.A02G025400 Gossypium hirsutum HOM05D003628 ORTHO05D004253 3.3e-115 420.2 805 43.9
Sopen09g034100 Solanum pennellii HOM05D003628 ORTHO05D004253 3.3e-115 420.2 808 44.7
FAN22G0313 Fragaria x ananassa HOM05D003628 ORTHO05D004253 3.6e-114 416.8 811 42.5
Gorai.005G036000 Gossypium raimondii HOM05D003628 ORTHO05D004253 1.4e-113 414.8 809 42.8
TWI73G0229 Tripterygium wilfordii HOM05D003628 ORTHO05D004253 1.4e-113 414.8 811 42.9
unitig_748.g7341 Utricularia gibba HOM05D003628 ORTHO05D004253 1.8e-113 414.5 696 44.8
CAN.G812.46 Capsicum annuum HOM05D003628 ORTHO05D004253 4.0e-113 413.3 786 43.8
CsaV3_2G012280 Cucumis sativus L. HOM05D003628 ORTHO05D004253 4.0e-113 413.3 848 42.8
TPR.G23641 Trifolium pratense HOM05D003628 ORTHO05D004253 5.2e-113 412.9 822 41.5
Lalb_Chr01g0011261 Lupinus albus HOM05D003628 ORTHO05D004253 3.4e-112 410.2 837 41.5
THA.LOC104821624 Tarenaya hassleriana HOM05D003628 ORTHO05D004253 9.9e-112 408.7 794 43.1
PGR142G1422 Punica granatum HOM05D003628 ORTHO05D004253 2.2e-111 407.5 790 41.6
Lj6g0006649 Lotus japonicus HOM05D003628 ORTHO05D004253 2.4e-110 404.1 762 41.7
Lalb_Chr03g0036821 Lupinus albus HOM05D003628 ORTHO05D004253 4.1e-110 403.3 831 40.3
CSS0021427 Camellia sinensis var. sinensis HOM05D003628 ORTHO05D004253 7.1e-110 402.5 835 41.1
Haze_11526 Corylus avellana HOM05D003628 ORTHO05D004253 1.6e-109 401.4 892 40.9
TAR362G1171 Trochodendron aralioides HOM05D003628 ORTHO05D004253 1.6e-109 401.4 815 42.7
Sc19g0002160 Simmondsia chinensis HOM05D003628 ORTHO05D004253 3.5e-109 400.2 784 41.8
Psat6g109680 Pisum sativum HOM05D003628 ORTHO05D004253 4.6e-109 399.8 817 40.5
AUR62030025 Chenopodium quinoa HOM05D003628 ORTHO05D004253 6.0e-109 399.4 813 41.5
Gohir.D02G032600 Gossypium hirsutum HOM05D003628 ORTHO05D004253 2.3e-108 397.5 810 41.7
EL10Ac3g06305 Beta vulgaris HOM05D003628 ORTHO05D004253 3.0e-108 397.1 794 42.3
arahy.Tifrunner.gnm1.ann1.7KG1FV Arachis hypogaea HOM05D003628 ORTHO05D004253 6.6e-108 396.0 822 40.5
PSO832G4023 Papaver somniferum HOM05D003628 ORTHO05D004253 1.9e-107 394.4 830 40.8
TAR365G0848 Trochodendron aralioides HOM05D003628 ORTHO05D004253 2.5e-107 394.0 792 43.7
CiPaw.02G103800 Carya illinoinensis HOM05D003628 ORTHO05D004253 4.3e-107 393.3 407 62.2
RcHm_v2.0_Chr4g0396341 Rosa chinensis HOM05D003628 ORTHO05D004253 2.8e-106 390.6 814 42.5
CSS0020381 Camellia sinensis var. sinensis HOM05D003628 ORTHO05D004253 6.2e-106 389.4 650 46.6
Medtr1g046350 Medicago truncatula HOM05D003628 ORTHO05D004253 1.1e-105 388.7 819 40.4
Thecc.04G217100 Theobroma cacao HOM05D003628 ORTHO05D004253 9.9e-104 382.1 818 42.5
Gorai.006G218800 Gossypium raimondii HOM05D003628 ORTHO05D004253 1.7e-103 381.3 813 42.4
Ciclev10004333m.g Citrus clementina HOM05D003628 ORTHO05D004253 6.4e-103 379.4 833 41.1
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 2.4e-102 377.5 781 41.9
Duzib212G0614 Durio zibethinus HOM05D003628 ORTHO05D004253 5.4e-102 376.3 813 41.2
AUR62002607 Chenopodium quinoa HOM05D003628 ORTHO05D004253 1.2e-101 375.2 405 58.8
Rhsim02G0049400 Rhododendron simsii HOM05D003628 ORTHO05D004253 2.7e-101 374.0 822 40.6
PSO764G0031 Papaver somniferum HOM05D003628 ORTHO05D004253 6.0e-101 372.9 823 40.1
DCAR_027362 Daucus carota HOM05D003628 ORTHO05D004253 5.1e-100 369.8 771 42.0
Gohir.D09G195400 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.9e-99 367.9 810 42.0
FvH4_4g05311 Fragaria vesca HOM05D003628 ORTHO05D004253 9.6e-99 365.5 806 41.3
Sabra08G0133300 Salix brachista HOM05D003628 ORTHO05D004253 1.6e-98 364.8 825 40.6
FAN07G2212 Fragaria x ananassa HOM05D003628 ORTHO05D004253 4.0e-97 360.1 811 40.8
Lalb_Chr19g0128621 Lupinus albus HOM05D003628 ORTHO05D004253 4.0e-97 360.1 836 40.9
THA.LOC104804570 Tarenaya hassleriana HOM05D003628 ORTHO05D004253 4.0e-97 360.1 799 41.6
Sp3g21980 Schrenkiella parvula HOM05D003628 ORTHO05D004253 9.0e-97 359.0 803 40.1
Cfa014840 Carpinus fangiana HOM05D003628 ORTHO05D004253 5.8e-96 356.3 811 41.3
BcaB03g14597 Brassica carinata HOM05D003628 ORTHO05D004253 8.4e-95 352.4 799 39.3
Duzib151G0300 Durio zibethinus HOM05D003628 ORTHO05D004253 1.9e-94 351.3 819 40.4
TAR633G2428 Trochodendron aralioides HOM05D003628 ORTHO05D004253 2.4e-94 350.9 847 39.0
Gohir.A09G201200 Gossypium hirsutum HOM05D003628 ORTHO05D004253 7.1e-94 349.4 815 40.1
MELO3C023064.2 Cucumis melo HOM05D003628 ORTHO05D004253 9.3e-94 349.0 849 39.1
ECA234G0302 Erigeron canadensis HOM05D003628 ORTHO05D004253 1.2e-93 348.6 484 52.5
Thhalv10002420m.g Eutrema salsugineum HOM05D003628 ORTHO05D004253 1.6e-93 348.2 807 39.9
VMungo0720G2372 Vigna mungo HOM05D003628 ORTHO05D004253 1.6e-93 348.2 730 40.5
Eucgr.H00111 Eucalyptus grandis HOM05D003628 ORTHO05D004253 2.1e-93 347.8 830 40.5
BcaB06g26600 Brassica carinata HOM05D003628 ORTHO05D004253 3.5e-93 347.1 565 45.5
Phvul.007G238700 Phaseolus vulgaris HOM05D003628 ORTHO05D004253 3.5e-93 347.1 819 39.3
BraA07t28601Z Brassica rapa HOM05D003628 ORTHO05D004253 3.0e-92 344.0 846 36.4
Potri.008G174800 Populus trichocarpa HOM05D003628 ORTHO05D004253 6.6e-92 342.8 804 40.7
Carub.0003s2454 Capsella rubella HOM05D003628 ORTHO05D004253 1.5e-91 341.7 802 39.4
ATR0580G379 Amborella trichopoda HOM05D003628 ORTHO05D004253 3.3e-91 340.5 835 38.2
BcaB04g20394 Brassica carinata HOM05D003628 ORTHO05D004253 1.6e-90 338.2 766 40.5
C07p12290 Brassica napus HOM05D003628 ORTHO05D004253 3.6e-90 337.0 507 48.5
Prupe.1G054700 Prunus persica HOM05D003628 ORTHO05D004253 6.2e-90 336.3 815 39.5
HanXRQChr12g0359881 Helianthus annuus HOM05D003628 ORTHO05D004253 1.8e-89 334.7 660 44.2
HanXRQChr10g0311151 Helianthus annuus HOM05D003628 ORTHO05D004253 3.1e-89 334.0 650 43.2
FAN12G2520 Fragaria x ananassa HOM05D003628 ORTHO05D004253 5.3e-89 333.2 987 34.8
Lj3A630T50 Lonicera japonica HOM05D003628 ORTHO05D004253 2.6e-88 330.9 690 45.4
AT3G23980 Arabidopsis thaliana HOM05D003628 ORTHO05D004253 9.9e-88 328.9 798 38.3
MBI05_g37047_MAGBIO Magnolia biondii HOM05D003628 ORTHO05D004253 9.9e-88 328.9 862 37.2
Sed0002438 Sechium edule HOM05D003628 ORTHO05D004253 2.2e-87 327.8 853 38.6
AL3G39530 Arabidopsis lyrata HOM05D003628 ORTHO05D004253 3.8e-87 327.0 805 38.4
C07p12320 Brassica napus HOM05D003628 ORTHO05D004253 1.3e-84 318.5 775 39.4
Sed0008500 Sechium edule HOM05D003628 ORTHO05D004253 1.3e-84 318.5 835 38.8
Ah.07g204120 Amaranthus hybridus HOM05D003628 ORTHO05D004253 5.1e-84 316.6 804 38.9
Aa31LG8G10920 Aethionema arabicum HOM05D003628 ORTHO05D004253 3.3e-83 313.9 775 40.0
Lsat_1_v5_gn_5_148361 Lactuca sativa HOM05D003628 ORTHO05D004253 9.6e-83 312.4 651 45.2
BcaC06g35665 Brassica carinata HOM05D003628 ORTHO05D004253 1.6e-82 311.6 610 42.0
CARHR100260 Cardamine hirsuta HOM05D003628 ORTHO05D004253 1.8e-81 308.1 803 38.2
Zm00001eb365010 Zea mays HOM05D003628 ORTHO05D004253 4.0e-81 307.0 803 36.5
Os01g0911800 Oryza sativa ssp. japonica HOM05D003628 ORTHO05D004253 5.3e-81 306.6 636 41.0
Glyma.10G128350 Glycine max HOM05D003628 ORTHO05D004253 2.0e-80 304.7 305 60.7
Zm00001eb143670 Zea mays HOM05D003628 ORTHO05D004253 3.4e-80 303.9 806 37.5
BolC7t41696H Brassica oleracea HOM05D003628 ORTHO05D004253 2.9e-79 300.8 770 40.0
ClCG06G007410 Citrullus lanatus HOM05D003628 ORTHO05D004253 1.2e-77 295.4 833 37.6
MD16G1232700 Malus domestica HOM05D003628 ORTHO05D004253 2.7e-77 294.3 828 38.5
BcaC06g35667 Brassica carinata HOM05D003628 ORTHO05D004253 4.6e-77 293.5 480 47.5
A07p08160 Brassica napus HOM05D003628 ORTHO05D004253 4.6e-77 293.5 833 35.2
CDE07G1740 Ceratophyllum demersum HOM05D003628 ORTHO05D004253 5.1e-76 290.0 816 35.5
A03p43510 Brassica napus HOM05D003628 ORTHO05D004253 1.5e-75 288.5 653 39.2
vmacro15908 Vaccinium macrocarpon HOM05D003628 ORTHO05D004253 6.3e-74 283.1 808 37.0
BcaC01g03342 Brassica carinata HOM05D003628 ORTHO05D004253 5.3e-73 280.0 506 45.1
BraA03t13490Z Brassica rapa HOM05D003628 ORTHO05D004253 1.5e-72 278.5 793 35.8
HPP92_014197 Vanilla planifolia HOM05D003628 ORTHO05D004253 4.5e-72 276.9 825 35.4
C03p53470 Brassica napus HOM05D003628 ORTHO05D004253 6.1e-69 266.5 503 42.9
BolC3t17608H Brassica oleracea HOM05D003628 ORTHO05D004253 7.9e-69 266.2 506 43.5
Nitab4.5_0003287g0020 Nicotiana tabacum HOM05D003628 ORTHO05D004253 7.9e-69 266.2 607 39.2
HPP92_026454 Vanilla planifolia HOM05D003628 ORTHO05D004253 5.7e-67 260.0 523 41.3
Cpa.g.sc59.57 Carica papaya HOM05D003628 ORTHO05D004253 3.7e-58 230.7 647 38.0
Hund12227 Selenicereus undatus HOM05D003628 ORTHO05D004253 6.3e-58 229.9 591 38.4
Aqoxy1G00125 Aquilegia oxysepala HOM05D003628 ORTHO05D004253 1.4e-57 228.8 823 33.9
Nn3g19840 Nelumbo nucifera HOM05D003628 ORTHO05D004253 1.3e-47 195.7 798 32.6
CDE04G0520 Ceratophyllum demersum HOM05D003628 ORTHO05D004253 5.0e-47 193.7 331 43.2
Lj6A641G44 Lonicera japonica HOM05D003628 ORTHO05D004253 5.0e-47 193.7 642 33.8
Oeu012942.2 Olea europaea HOM05D003628 ORTHO05D004253 1.6e-45 188.7 162 69.1
Pp3c20_15710 Physcomitrium patens HOM05D003628 ORTHO05D004253 6.1e-45 186.8 422 34.1
Pp3c24_10590 Physcomitrium patens HOM05D003628 ORTHO05D004253 4.0e-44 184.1 419 33.9
AagrBONN_evm.TU.Sc2ySwM_362.1684 Anthoceros agrestis HOM05D003628 ORTHO05D004253 1.5e-43 182.2 400 37.2
Mapoly0068s0063 Marchantia polymorpha HOM05D003628 ORTHO05D004253 7.7e-40 169.9 536 33.4
Oeu023151.1 Olea europaea HOM05D003628 ORTHO05D004253 1.5e-38 165.6 113 79.6
SMO116G0337 Selaginella moellendorffii HOM05D003628 ORTHO05D004253 1.3e-34 152.5 359 37.3
MD13G1227500 Malus domestica HOM05D003628 ORTHO05D004253 1.1e-30 139.4 100 75.0
SEGI_10173 Sequoiadendron giganteum HOM05D003628 ORTHO05D004253 1.1e-30 139.4 388 36.3
CBR_g38414 Chara braunii HOM05D003628 ORTHO05D004253 1.5e-30 139.0 627 28.7
Cpa.g.sc59.56 Carica papaya HOM05D003628 ORTHO05D004253 9.8e-27 126.3 121 64.5
Pp3c23_8100 Physcomitrium patens HOM05D003628 ORTHO05D004253 8.3e-26 123.2 411 29.2
Actinidia11385 Actinidia chinensis HOM05D003628 ORTHO05D004253 4.5e-24 117.5 91 71.4
Hma1.2p1_0112F.1_g055040 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 3.6e-21 107.8 169 45.0
Hma1.2p1_0112F.1_g055050 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 1.8e-20 105.5 277 34.7
Gorai.007G071000 Gossypium raimondii HOM05D003628 ORTHO05D004253 1.7e-18 99.0 65 80.0
Gohir.D03G086101 Gossypium hirsutum HOM05D003628 ORTHO05D004253 2.2e-18 98.6 62 82.3
Gorai.003G076100 Gossypium raimondii HOM05D005297 ORTHO05D006545 4.9e-18 97.4 62 82.3
Gohir.D09G057732 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.1e-17 96.3 68 75.0
Gorai.007G244100 Gossypium raimondii HOM05D003628 ORTHO05D004253 1.4e-17 95.9 63 79.4
Gohir.D04G116566 Gossypium hirsutum HOM05D003628 ORTHO05D004253 5.9e-16 90.5 66 71.2
Gorai.010G154900 Gossypium raimondii HOM05D003628 ORTHO05D004253 1.0e-15 89.7 56 82.1
Gohir.D06G132966 Gossypium hirsutum HOM05D003628 ORTHO05D004253 3.0e-15 88.2 55 81.8
Gohir.D08G229150 Gossypium hirsutum HOM05D003628 ORTHO05D004253 3.0e-15 88.2 56 80.4
Glyma.10G128300 Glycine max HOM05D003628 ORTHO05D004253 3.9e-15 87.8 489 30.5
Gohir.D11G226200 Gossypium hirsutum HOM05D003628 ORTHO05D004253 3.9e-15 87.8 56 82.1
Gohir.D02G158575 Gossypium hirsutum HOM05D003628 ORTHO05D004253 8.6e-15 86.7 56 78.6
AagrBONN_evm.TU.Sc2ySwM_344.5018 Anthoceros agrestis HOM05D003628 ORTHO05D004253 9.5e-14 83.2 143 38.5
Oeu023150.1 Olea europaea HOM05D003628 ORTHO05D004253 1.6e-13 82.4 55 72.7
Actinidia11386 Actinidia chinensis HOM05D003628 ORTHO05D004253 4.7e-13 80.9 546 27.7
SHI00869 Sapria himalayana HOM05D003628 ORTHO05D004253 4.7e-13 80.9 78 57.7
Gohir.D08G165950 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.4e-12 79.3 50 80.0
Hund12233 Selenicereus undatus HOM05D003628 ORTHO05D004253 1.4e-12 79.3 74 60.8
Gorai.013G043600 Gossypium raimondii HOM05D003628 ORTHO05D004253 4.0e-12 77.8 50 78.0
Ah.14g082010 Amaranthus hybridus HOM05D003628 ORTHO05D004253 5.2e-12 77.4 60 71.7
Gohir.D11G243366 Gossypium hirsutum HOM05D003628 ORTHO05D004253 2.6e-11 75.1 63 68.3
PGSC0003DMG402011586 Solanum tuberosum HOM05D003628 ORTHO05D004253 5.8e-11 73.9 62 64.5
AL2G14740 Arabidopsis lyrata HOM05D000013 ORTHO05D000011 2.0e-08 65.5 47 70.2
Gohir.D01G060866 Gossypium hirsutum HOM05D003628 ORTHO05D004253 3.0e-07 61.6 39 76.9
Gohir.A11G239380 Gossypium hirsutum HOM05D003628 ORTHO05D004253 8.6e-07 60.1 39 74.4
Gorai.009G342200 Gossypium raimondii HOM05D003628 ORTHO05D016264 1.5e-06 59.3 37 78.4
Cre12.g514550 Chlamydomonas reinhardtii HOM05D003628 ORTHO05D004253 2.5e-06 58.5 95 34.7
Gohir.D08G175500 Gossypium hirsutum HOM05D003628 ORTHO05D004253 2.5e-06 58.5 39 71.8
Gohir.D01G077750 Gossypium hirsutum HOM05D003628 ORTHO05D004253 3.3e-06 58.2 39 74.4
Gohir.D06G084232 Gossypium hirsutum HOM05D003628 ORTHO05D016264 4.3e-06 57.8 37 75.7
Gorai.003G055900 Gossypium raimondii HOM05D005297 ORTHO05D006545 5.6e-06 57.4 39 71.8


User provided reference genes

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