Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G00548 Erythranthe guttata HOM05D007643 ORTHO05D007801 8.1e-80 300.4 161 100.0
MSTRG.9860 Avicennia marina HOM05D007643 ORTHO05D007801 7.1e-52 207.6 158 76.6
SGA_v2.0_scaffold67G22694 Striga asiatica HOM05D007643 ORTHO05D007801 5.1e-34 148.3 221 48.4
MSTRG.4170 Avicennia marina HOM05D007643 ORTHO05D007801 1.1e-31 140.6 145 57.9
Oeu059396.1 Olea europaea HOM05D007643 ORTHO05D007801 9.0e-31 137.5 92 76.1
PGSC0003DMG400024520 Solanum tuberosum HOM05D007643 ORTHO05D007801 3.4e-22 109.0 158 46.2
unitig_746.g26846 Utricularia gibba HOM05D007643 ORTHO05D007801 1.0e-21 107.5 100 57.0
Nitab4.5_0002805g0050 Nicotiana tabacum HOM05D007643 ORTHO05D007801 2.5e-20 102.8 153 47.7
Peaxi162Scf00017g03267 Petunia axillaris HOM05D007643 ORTHO05D007801 2.5e-20 102.8 93 59.1
Sopen03g033740 Solanum pennellii HOM05D007643 ORTHO05D007801 3.2e-20 102.4 154 45.5
Nitab4.5_0004190g0030 Nicotiana tabacum HOM05D007643 ORTHO05D007801 7.2e-20 101.3 76 65.8
CAN.G982.32 Capsicum annuum HOM05D007643 ORTHO05D007801 3.6e-19 99.0 154 45.5
Nitab4.5_0002449g0120 Nicotiana tabacum HOM05D007643 ORTHO05D007801 4.7e-19 98.6 74 66.2
Nitab4.5_0000646g0290 Nicotiana tabacum HOM05D007643 ORTHO05D007801 6.1e-19 98.2 154 44.2
Cc04_g08010 Coffea canephora HOM05D007643 ORTHO05D007801 2.3e-18 96.3 159 42.1
Dinv36824 Davidia involucrata HOM05D007643 ORTHO05D007801 3.9e-18 95.5 97 51.5
Dinv38625 Davidia involucrata HOM05D007643 ORTHO05D007801 3.7e-16 89.0 93 52.7
Actinidia35057 Actinidia chinensis HOM05D007643 ORTHO05D007801 8.2e-16 87.8 103 48.5
Rhsim12G0146900 Rhododendron simsii HOM05D000001 ORTHO05D000003 1.2e-14 84.0 111 49.5
Thecc.03G110800 Theobroma cacao HOM05D007643 ORTHO05D007801 2.6e-14 82.8 153 39.9
CiPaw.15G116100 Carya illinoinensis HOM05D007643 ORTHO05D007801 3.4e-14 82.4 100 48.0
Actinidia18967 Actinidia chinensis HOM05D007643 ORTHO05D007801 7.7e-14 81.3 158 39.9
Duzib068G1429 Durio zibethinus HOM05D007643 ORTHO05D007801 1.0e-13 80.9 152 40.1
COL.COLO4_28832 Corchorus olitorius HOM05D007643 ORTHO05D007801 1.7e-13 80.1 152 40.1
vmacro16469 Vaccinium macrocarpon HOM05D007643 ORTHO05D007801 1.7e-13 80.1 158 39.2
Atru.chr9.639 Acer truncatum HOM05D007643 ORTHO05D007801 5.0e-13 78.6 99 42.4
ECA232G2778 Erigeron canadensis HOM05D007643 ORTHO05D007801 1.4e-12 77.0 65 58.5
Lalb_Chr23g0273871 Lupinus albus HOM05D007643 ORTHO05D007801 1.4e-12 77.0 98 42.9
GSVIVG01008172001 Vitis vinifera HOM05D007643 ORTHO05D007801 1.9e-12 76.6 164 40.2
Lsat_1_v5_gn_4_112541 Lactuca sativa HOM05D007643 ORTHO05D007801 3.2e-12 75.9 96 43.8
CSS0044770 Camellia sinensis var. sinensis HOM05D007643 ORTHO05D007801 5.5e-12 75.1 87 48.3
QL10p021414 Quercus lobata HOM05D007643 ORTHO05D007801 1.6e-11 73.6 130 39.2
Aa31LG11G2440 Aethionema arabicum HOM05D007643 ORTHO05D007801 2.7e-11 72.8 95 42.1
THA.LOC104800981 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 3.6e-11 72.4 113 38.1
TWI15G0080 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 3.6e-11 72.4 82 41.5
Prupe.5G211300 Prunus persica HOM05D007643 ORTHO05D007801 4.7e-11 72.0 98 45.9
Gorai.007G040800 Gossypium raimondii HOM05D007643 ORTHO05D007801 6.1e-11 71.6 153 37.3
CANSAT11G0293 Cannabis sativa HOM05D007643 ORTHO05D007801 2.3e-10 69.7 85 47.1
Cfa019854 Carpinus fangiana HOM05D007643 ORTHO05D007801 2.3e-10 69.7 92 43.5
Gohir.D11G038100 Gossypium hirsutum HOM05D007643 ORTHO05D007801 2.3e-10 69.7 151 35.8
Potri.012G065400 Populus trichocarpa HOM05D007643 ORTHO05D007801 2.3e-10 69.7 118 39.0
Sabra12G0046800 Salix brachista HOM05D007643 ORTHO05D007801 2.3e-10 69.7 120 39.2
Eucgr.K02633 Eucalyptus grandis HOM05D007643 ORTHO05D007801 3.0e-10 69.3 111 40.5
THA.LOC104818362 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 3.0e-10 69.3 103 40.8
PGR044G0452 Punica granatum HOM05D007643 ORTHO05D007801 3.9e-10 68.9 130 36.9
Phvul.009G176200 Phaseolus vulgaris HOM05D007643 ORTHO05D007801 5.2e-10 68.6 99 39.4
Ciclev10022625m.g Citrus clementina HOM05D007643 ORTHO05D007801 6.7e-10 68.2 136 36.0
Gohir.D12G187200 Gossypium hirsutum HOM05D007643 ORTHO05D007801 1.1e-09 67.4 135 37.8
Manes.14G090200 Manihot esculenta HOM05D007643 ORTHO05D007801 1.5e-09 67.0 74 41.9
arahy.Tifrunner.gnm1.ann1.Z569TI Arachis hypogaea HOM05D007643 ORTHO05D007801 2.6e-09 66.2 93 41.9
Gorai.008G200700 Gossypium raimondii HOM05D007643 ORTHO05D007801 2.6e-09 66.2 135 37.8
Solyc06g069350.3 Solanum lycopersicum HOM05D007643 ORTHO05D007801 2.6e-09 66.2 80 48.8
AUR62032152 Chenopodium quinoa HOM05D007643 ORTHO05D007801 3.3e-09 65.9 66 42.4
AUR62039686 Chenopodium quinoa HOM05D007643 ORTHO05D007801 3.3e-09 65.9 66 42.4
MD14G1217500 Malus domestica HOM05D007643 ORTHO05D007801 5.7e-09 65.1 110 39.1
TWI81G0573 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 7.4e-09 64.7 158 32.9
Medtr2g059060 Medicago truncatula HOM05D007643 ORTHO05D007801 9.7e-09 64.3 92 40.2
SEGI_00634 Sequoiadendron giganteum HOM05D007643 ORTHO05D007801 9.7e-09 64.3 98 38.8
FAN08G1142 Fragaria x ananassa HOM05D007643 ORTHO05D007801 1.3e-08 63.9 156 34.0
FAN18G4512 Fragaria x ananassa HOM05D007643 ORTHO05D007801 2.2e-08 63.2 158 33.5
Glyma.04G185600 Glycine max HOM05D007643 ORTHO05D007801 2.8e-08 62.8 118 35.6
Gohir.A12G184500 Gossypium hirsutum HOM05D007643 ORTHO05D007801 2.8e-08 62.8 134 36.6
MELO3C017259.2 Cucumis melo HOM05D007643 ORTHO05D007801 3.7e-08 62.4 88 38.6
RcHm_v2.0_Chr7g0183911 Rosa chinensis HOM05D007643 ORTHO05D007801 4.8e-08 62.0 159 33.3
Glyma.06G180500 Glycine max HOM05D007643 ORTHO05D007801 1.4e-07 60.5 124 34.7
Sp2g24160 Schrenkiella parvula HOM05D010173 ORTHO05D007801 1.4e-07 60.5 155 30.3
ATR0691G209 Amborella trichopoda HOM05D007643 ORTHO05D007801 3.1e-07 59.3 83 41.0
FAN13G0443 Fragaria x ananassa HOM05D007643 ORTHO05D007801 4.1e-07 58.9 47 53.2
MD06G1206900 Malus domestica HOM05D007643 ORTHO05D007801 5.3e-07 58.5 157 33.1
Manes.06G079602 Manihot esculenta HOM05D007643 ORTHO05D007801 5.3e-07 58.5 67 46.3
CDE02G0802 Ceratophyllum demersum HOM05D007643 ORTHO05D007801 7.0e-07 58.2 83 33.7
Nn3g17593 Nelumbo nucifera HOM05D007643 ORTHO05D007801 7.0e-07 58.2 51 51.0
Psat1g029200 Pisum sativum HOM05D007643 ORTHO05D007801 1.6e-06 57.0 154 34.4
PSO063G2669 Papaver somniferum HOM05D007643 ORTHO05D007801 2.6e-06 56.2 93 37.6
Carub.0008s2154 Capsella rubella HOM05D010173 ORTHO05D007801 3.5e-06 55.8 103 34.0
Thhalv10004975m.g Eutrema salsugineum HOM05D010173 ORTHO05D007801 3.5e-06 55.8 104 35.6
Sed0015671 Sechium edule HOM05D007643 ORTHO05D007801 3.5e-06 55.8 162 32.7
ClCG06G015360 Citrullus lanatus HOM05D007643 ORTHO05D007801 5.9e-06 55.1 159 31.4
FvH4_5g13250 Fragaria vesca HOM05D007643 ORTHO05D007801 5.9e-06 55.1 113 34.5
Lj1g0019261 Lotus japonicus HOM05D007643 ORTHO05D007801 5.9e-06 55.1 148 32.4


User provided reference genes

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