Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G00502 Erythranthe guttata HOM05D005408 ORTHO05D006790 0.0e+00 1533.5 814 100.0
Oeu002940.1 Olea europaea HOM05D005408 ORTHO05D006790 1.3e-242 843.6 910 55.7
Migut.N00286 Erythranthe guttata HOM05D005408 ORTHO05D006790 6.4e-242 841.3 920 54.2
MSTRG.21921 Avicennia marina HOM05D005408 ORTHO05D006790 1.6e-237 826.6 959 51.8
SalBow3G0714 Salvia bowleyana HOM05D005408 ORTHO05D006790 4.8e-237 825.1 948 52.7
Dinv27073 Davidia involucrata HOM05D005408 ORTHO05D006790 5.6e-230 801.6 997 50.9
SGA_v2.0_scaffold101G29731 Striga asiatica HOM05D005408 ORTHO05D006790 9.9e-227 790.8 862 54.9
Actinidia20821 Actinidia chinensis HOM05D005408 ORTHO05D006790 1.3e-226 790.4 969 51.3
Oeu005084.1 Olea europaea HOM05D005408 ORTHO05D006790 1.0e-223 780.8 913 53.2
Dinv29839 Davidia involucrata HOM05D005408 ORTHO05D006790 7.6e-219 764.6 951 50.1
SGA_v2.0_scaffold43G16217 Striga asiatica HOM05D005408 ORTHO05D006790 1.6e-216 756.9 948 50.9
GSVIVG01027854001 Vitis vinifera HOM05D005408 ORTHO05D006790 4.6e-216 755.4 916 49.8
Peaxi162Scf00392g00730 Petunia axillaris HOM05D005408 ORTHO05D006790 7.4e-214 748.0 948 48.9
CiPaw.02G109300 Carya illinoinensis HOM05D005408 ORTHO05D006790 1.6e-213 746.9 955 49.0
Thecc.04G259100 Theobroma cacao HOM05D005408 ORTHO05D006790 8.2e-213 744.6 923 51.0
MD16G1222000 Malus domestica HOM05D005408 ORTHO05D006790 1.1e-212 744.2 971 48.1
QL06p019224 Quercus lobata HOM05D005408 ORTHO05D006790 2.4e-212 743.0 912 50.9
CSS0047984 Camellia sinensis var. sinensis HOM05D005408 ORTHO05D006790 5.3e-212 741.9 984 47.7
Prupe.1G042300 Prunus persica HOM05D005408 ORTHO05D006790 2.0e-211 740.0 992 47.4
Haze_11418 Corylus avellana HOM05D005408 ORTHO05D006790 4.5e-211 738.8 952 48.4
Sopen09g033240 Solanum pennellii HOM05D005408 ORTHO05D006790 1.3e-210 737.3 975 48.2
Cfa014743 Carpinus fangiana HOM05D005408 ORTHO05D006790 5.0e-210 735.3 952 48.3
CAN.G220.39 Capsicum annuum HOM05D005408 ORTHO05D006790 1.1e-209 734.2 1012 48.2
MD13G1216600 Malus domestica HOM05D005408 ORTHO05D006790 2.5e-209 733.0 969 47.4
PGSC0003DMG400017212 Solanum tuberosum HOM05D005408 ORTHO05D006790 1.6e-208 730.3 974 47.9
TAR633G1608 Trochodendron aralioides HOM05D005408 ORTHO05D006790 1.6e-208 730.3 1006 46.9
COL.COLO4_15917 Corchorus olitorius HOM05D005408 ORTHO05D006790 1.0e-207 727.6 930 48.9
Potri.008G169200 Populus trichocarpa HOM05D005408 ORTHO05D006790 1.8e-207 726.9 918 49.2
Gohir.D02G046500 Gossypium hirsutum HOM05D005408 ORTHO05D006790 5.1e-207 725.3 910 49.7
Solyc09g090340.3 Solanum lycopersicum HOM05D005408 ORTHO05D006790 5.1e-207 725.3 965 47.9
CSS0016984 Camellia sinensis var. sinensis HOM05D005408 ORTHO05D006790 1.9e-206 723.4 969 47.6
MSTRG.4147 Avicennia marina HOM05D005408 ORTHO05D006790 5.7e-206 721.8 866 50.9
Manes.15G043200 Manihot esculenta HOM05D005408 ORTHO05D006790 1.3e-205 720.7 936 48.3
Duzib212G0761 Durio zibethinus HOM05D005408 ORTHO05D006790 2.2e-205 719.9 933 48.8
TAR362G0279 Trochodendron aralioides HOM05D005408 ORTHO05D006790 2.2e-205 719.9 987 46.8
Lj3A684T25 Lonicera japonica HOM05D005408 ORTHO05D006790 3.7e-205 719.2 993 49.7
Potri.010G069200 Populus trichocarpa HOM05D005408 ORTHO05D006790 1.4e-204 717.2 948 48.6
DCAR_024278 Daucus carota HOM05D005408 ORTHO05D006790 1.8e-204 716.8 934 48.7
RcHm_v2.0_Chr4g0394291 Rosa chinensis HOM05D005408 ORTHO05D006790 2.4e-204 716.5 947 48.6
TWI09G0385 Tripterygium wilfordii HOM05D005408 ORTHO05D006790 4.1e-204 715.7 927 48.2
Duzib151G0888 Durio zibethinus HOM05D005408 ORTHO05D006790 5.3e-204 715.3 926 49.1
Lj3A679T38 Lonicera japonica HOM05D005408 ORTHO05D006790 5.3e-204 715.3 996 49.5
Sc19g0003230 Simmondsia chinensis HOM05D005408 ORTHO05D006790 6.9e-204 714.9 934 47.6
Atru.chr4.2004 Acer truncatum HOM05D005408 ORTHO05D006790 1.2e-203 714.1 931 48.1
Ciclev10004264m.g Citrus clementina HOM05D005408 ORTHO05D006790 2.0e-203 713.4 931 48.0
FAN12G0827 Fragaria x ananassa HOM05D005408 ORTHO05D006790 2.0e-203 713.4 921 49.6
Gohir.A02G040500 Gossypium hirsutum HOM05D005408 ORTHO05D006790 3.4e-203 712.6 910 49.5
vmacro15459 Vaccinium macrocarpon HOM05D005408 ORTHO05D006790 4.5e-203 712.2 1091 44.5
FvH4_4g04020 Fragaria vesca HOM05D005408 ORTHO05D006790 6.5e-202 708.4 918 48.9
Rhsim02G0041600 Rhododendron simsii HOM05D005408 ORTHO05D006790 8.5e-202 708.0 1134 42.5
Manes.15G043300 Manihot esculenta HOM05D005408 ORTHO05D006790 1.1e-201 707.6 926 49.0
CARHR220500 Cardamine hirsuta HOM05D005408 ORTHO05D006790 1.9e-201 706.8 934 47.2
EL10Ac3g04981 Beta vulgaris HOM05D005408 ORTHO05D006790 3.2e-201 706.1 938 47.2
Aa31LG9G3050 Aethionema arabicum HOM05D005408 ORTHO05D006790 7.2e-201 704.9 902 47.1
FAN17G2537 Fragaria x ananassa HOM05D005408 ORTHO05D006790 7.2e-201 704.9 921 48.6
PGR004G2334 Punica granatum HOM05D005408 ORTHO05D006790 2.1e-200 703.4 904 48.3
Nitab4.5_0000596g0060 Nicotiana tabacum HOM05D005408 ORTHO05D006790 3.6e-200 702.6 1069 43.2
TWI53G1583 Tripterygium wilfordii HOM05D005408 ORTHO05D006790 1.8e-199 700.3 958 47.1
Nitab4.5_0000044g0530 Nicotiana tabacum HOM05D005408 ORTHO05D006790 6.7e-199 698.4 1014 45.0
Cc03_g05790 Coffea canephora HOM05D005408 ORTHO05D006790 1.5e-198 697.2 973 48.6
Carub.0007s2798 Capsella rubella HOM05D005408 ORTHO05D006790 2.6e-198 696.4 924 47.1
Eucgr.H03018 Eucalyptus grandis HOM05D005408 ORTHO05D006790 2.6e-198 696.4 919 47.2
ClCG05G004200 Citrullus lanatus HOM05D005408 ORTHO05D006790 4.4e-198 695.7 971 44.6
Thhalv10024359m.g Eutrema salsugineum HOM05D005408 ORTHO05D006790 9.7e-198 694.5 862 48.7
CiPaw.01G181400 Carya illinoinensis HOM05D005408 ORTHO05D006790 1.3e-197 694.1 940 47.2
Hma1.2p1_0112F.1_g054305 Hydrangea macrophylla HOM05D005408 ORTHO05D006790 2.8e-197 693.0 694 56.1
AL7G41950 Arabidopsis lyrata HOM05D005408 ORTHO05D006790 3.7e-197 692.6 865 48.1
Sp7g12340 Schrenkiella parvula HOM05D005408 ORTHO05D006790 4.8e-197 692.2 919 46.5
AT4G14310 Arabidopsis thaliana HOM05D005408 ORTHO05D006790 8.2e-197 691.4 917 47.2
CANSAT54G2691 Cannabis sativa HOM05D005408 ORTHO05D006790 8.2e-197 691.4 944 46.4
Sabra08G0129000 Salix brachista HOM05D005408 ORTHO05D006790 8.2e-197 691.4 942 47.3
Sabra10G0037900 Salix brachista HOM05D005408 ORTHO05D006790 8.2e-197 691.4 928 47.3
MELO3C006406.2 Cucumis melo HOM05D005408 ORTHO05D006790 1.4e-196 690.6 972 44.3
ECA248G0134 Erigeron canadensis HOM05D005408 ORTHO05D006790 2.4e-196 689.9 893 47.8
Nn1g02867 Nelumbo nucifera HOM05D005408 ORTHO05D006790 5.3e-196 688.7 1032 44.0
CsaV3_3G011930 Cucumis sativus L. HOM05D005408 ORTHO05D006790 1.2e-195 687.6 971 44.8
BcaNung06103 Brassica carinata HOM05D005408 ORTHO05D006790 2.0e-195 686.8 891 47.7
Hund03055 Selenicereus undatus HOM05D005408 ORTHO05D006790 2.0e-195 686.8 972 46.4
HanXRQChr11g0330791 Helianthus annuus HOM05D005408 ORTHO05D006790 2.6e-195 686.4 928 47.6
Gorai.005G051300 Gossypium raimondii HOM05D005408 ORTHO05D006790 6.5e-194 681.8 865 50.3
THA.LOC104804761 Tarenaya hassleriana HOM05D005408 ORTHO05D006790 1.4e-193 680.6 935 46.6
Lsat_1_v5_gn_1_74661 Lactuca sativa HOM05D005408 ORTHO05D006790 2.7e-192 676.4 956 46.1
C03p76860 Brassica napus HOM05D005408 ORTHO05D006790 6.1e-192 675.2 899 47.2
A08p24350 Brassica napus HOM05D005408 ORTHO05D006790 1.4e-191 674.1 897 47.3
AUR62015544 Chenopodium quinoa HOM05D005408 ORTHO05D006790 3.0e-191 672.9 932 46.1
Cpa.g.sc44.32 Carica papaya HOM05D005408 ORTHO05D006790 8.8e-191 671.4 952 45.6
FAN22G0039 Fragaria x ananassa HOM05D005408 ORTHO05D006790 1.5e-190 670.6 976 45.8
BcaC01g00205 Brassica carinata HOM05D005408 ORTHO05D006790 4.4e-190 669.1 899 46.6
TPR.G25189 Trifolium pratense HOM05D005408 ORTHO05D006790 4.4e-190 669.1 797 49.4
Glyma.02G003800 Glycine max HOM05D005408 ORTHO05D006790 5.7e-190 668.7 654 54.3
THA.LOC104822240 Tarenaya hassleriana HOM05D005408 ORTHO05D006790 5.7e-190 668.7 933 45.8
Sed0026902 Sechium edule HOM05D005408 ORTHO05D006790 4.8e-189 665.6 919 45.3
arahy.Tifrunner.gnm1.ann1.HQEG75 Arachis hypogaea HOM05D005408 ORTHO05D006790 4.1e-188 662.5 912 46.3
Lalb_Chr03g0037341 Lupinus albus HOM05D005408 ORTHO05D006790 4.5e-187 659.1 914 45.8
MBI07_g31083_MAGBIO Magnolia biondii HOM05D005408 ORTHO05D006790 4.5e-187 659.1 992 43.0
arahy.Tifrunner.gnm1.ann1.NA4LRU Arachis hypogaea HOM05D005408 ORTHO05D006790 5.9e-187 658.7 929 45.2
Ca_03010_v3 Cicer arietinum L. HOM05D005408 ORTHO05D006790 7.7e-187 658.3 861 48.1
BraA08t34390Z Brassica rapa HOM05D005408 ORTHO05D006790 1.0e-186 657.9 922 45.7
BolC3t19941H Brassica oleracea HOM05D005408 ORTHO05D006790 1.7e-186 657.1 911 45.3
Glyma.10G004700 Glycine max HOM05D005408 ORTHO05D006790 1.7e-186 657.1 657 54.0
Phvul.007G275400 Phaseolus vulgaris HOM05D005408 ORTHO05D006790 2.2e-186 656.8 648 54.6
VMungo0720G1073 Vigna mungo HOM05D005408 ORTHO05D006790 3.8e-186 656.0 633 55.1
Aqoxy5G00183 Aquilegia oxysepala HOM05D005408 ORTHO05D006790 2.5e-185 653.3 1012 43.5
Lj6g0021221 Lotus japonicus HOM05D005408 ORTHO05D006790 3.2e-185 652.9 867 46.0
AUR62002164 Chenopodium quinoa HOM05D005408 ORTHO05D006790 9.4e-185 651.4 918 46.1
Medtr1g041685 Medicago truncatula HOM05D005408 ORTHO05D006790 9.4e-185 651.4 868 47.0
PSO832G1937 Papaver somniferum HOM05D005408 ORTHO05D006790 3.6e-184 649.4 987 44.7
HanXRQChr01g0023201 Helianthus annuus HOM05D005408 ORTHO05D006790 6.1e-184 648.7 919 46.4
PSO210G0343 Papaver somniferum HOM05D005408 ORTHO05D006790 8.0e-184 648.3 995 44.9
Psat6g104520 Pisum sativum HOM05D005408 ORTHO05D006790 3.1e-180 636.3 895 45.3
Zm00001eb258510 Zea mays HOM05D005408 ORTHO05D006790 7.5e-166 588.6 680 49.0
Zm00001eb191660 Zea mays HOM05D005408 ORTHO05D006790 1.4e-164 584.3 684 49.1
CDE04G2551 Ceratophyllum demersum HOM05D005408 ORTHO05D006790 9.5e-161 571.6 677 48.0
ATR0736G089 Amborella trichopoda HOM05D005408 ORTHO05D006790 8.0e-160 568.5 723 47.4
CDE07G1006 Ceratophyllum demersum HOM05D005408 ORTHO05D006790 1.7e-154 550.8 974 39.2
unitig_736.g22443 Utricularia gibba HOM05D005408 ORTHO05D006790 2.2e-149 533.9 795 45.4
HPP92_008326 Vanilla planifolia HOM05D005408 ORTHO05D006790 4.3e-137 493.0 617 45.7
SEGI_14734 Sequoiadendron giganteum HOM05D005408 ORTHO05D006790 1.5e-134 484.6 711 42.1
TPR.G25191 Trifolium pratense HOM05D005408 ORTHO05D006790 2.8e-120 437.2 624 42.6
Ah.13g072600 Amaranthus hybridus HOM05D005408 ORTHO05D006790 5.5e-108 396.4 715 41.1
Mapoly0063s0094 Marchantia polymorpha HOM05D005408 ORTHO05D006790 2.1e-99 367.9 549 38.6
Pp3c16_10130 Physcomitrium patens HOM05D005408 ORTHO05D006790 1.4e-92 345.1 526 38.2
Pp3c25_7300 Physcomitrium patens HOM05D005408 ORTHO05D006790 1.9e-89 334.7 759 32.0
Os02g0809900 Oryza sativa ssp. japonica HOM05D005408 ORTHO05D006790 1.3e-85 322.0 282 56.4
AagrBONN_evm.TU.Sc2ySwM_228.3605 Anthoceros agrestis HOM05D005408 ORTHO05D006790 5.0e-85 320.1 450 39.1
SalBow8G3468 Salvia bowleyana HOM05D005408 ORTHO05D006790 4.4e-33 147.5 116 64.7
SalBow7G4774 Salvia bowleyana HOM05D005408 ORTHO05D006790 1.4e-31 142.5 169 49.1
CBR_g30942 Chara braunii HOM05D005408 ORTHO05D006790 1.7e-29 135.6 372 27.7
Hund11908 Selenicereus undatus HOM05D005408 ORTHO05D006790 7.8e-22 110.2 145 47.6
CiPaw.06G041800 Carya illinoinensis HOM05D005408 ORTHO05D006790 3.9e-21 107.8 318 35.2
Rhsim02G0041700 Rhododendron simsii HOM05D005408 ORTHO05D006790 1.6e-19 102.4 187 36.4
C04p41430 Brassica napus HOM05D005408 ORTHO05D006790 1.2e-14 86.3 130 40.8
BolC4t25724H Brassica oleracea HOM05D005408 ORTHO05D006790 1.6e-14 85.9 130 40.8
A04p07780 Brassica napus HOM05D005408 ORTHO05D006790 2.4e-10 72.0 81 51.9
BolC4t25725H Brassica oleracea HOM05D005408 ORTHO05D006790 4.0e-10 71.2 102 43.1
C04p41440 Brassica napus HOM05D005408 ORTHO05D006790 4.9e-08 64.3 105 41.0
unitig_899.g14890 Utricularia gibba HOM05D005408 ORTHO05D416926 6.4e-08 63.9 90 47.8
BcaC02g09333 Brassica carinata HOM05D005408 ORTHO05D006790 7.1e-07 60.5 55 56.4


User provided reference genes

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