Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G00496 Erythranthe guttata HOM05D006230 ORTHO05D007598 6.7e-76 287.3 152 100.0
SGA_v2.0_scaffold67G22731 Striga asiatica HOM05D006230 ORTHO05D007598 1.4e-52 209.9 152 73.0
Oeu023312.1 Olea europaea HOM05D006230 ORTHO05D007598 2.6e-51 205.7 152 70.4
SalBow3G4585 Salvia bowleyana HOM05D006230 ORTHO05D007598 3.1e-49 198.7 167 64.7
Oeu059405.1 Olea europaea HOM05D006230 ORTHO05D007598 7.2e-46 187.6 188 56.4
Nitab4.5_0001425g0090 Nicotiana tabacum HOM05D006230 ORTHO05D007598 5.2e-44 181.4 158 66.5
Dinv27088 Davidia involucrata HOM05D006230 ORTHO05D007598 2.0e-43 179.5 156 66.0
CSS0007771 Camellia sinensis var. sinensis HOM05D006230 ORTHO05D007598 2.6e-43 179.1 140 70.0
AUR62015538 Chenopodium quinoa HOM05D006230 ORTHO05D007598 5.7e-43 177.9 124 71.8
unitig_32.g10851 Utricularia gibba HOM05D006230 ORTHO05D007598 7.4e-43 177.6 125 74.4
Nitab4.5_0006936g0040 Nicotiana tabacum HOM05D006230 ORTHO05D007598 9.7e-43 177.2 158 64.6
Sed0003219 Sechium edule HOM05D006230 ORTHO05D007598 1.3e-42 176.8 145 65.5
Cc03_g05900 Coffea canephora HOM05D006230 ORTHO05D007598 2.2e-42 176.0 151 62.9
MELO3C006400.2 Cucumis melo HOM05D006230 ORTHO05D007598 1.8e-41 172.9 119 73.9
Solyc09g090410.3 Solanum lycopersicum HOM05D006230 ORTHO05D007598 2.4e-41 172.6 155 65.2
Sopen09g033320 Solanum pennellii HOM05D006230 ORTHO05D007598 2.4e-41 172.6 155 65.2
EL10Ac3g04971 Beta vulgaris HOM05D006230 ORTHO05D007598 3.1e-41 172.2 127 69.3
PGSC0003DMG400017161 Solanum tuberosum HOM05D006230 ORTHO05D007598 3.1e-41 172.2 152 63.8
Sed0015876 Sechium edule HOM05D006230 ORTHO05D007598 5.3e-41 171.4 145 64.8
Hma1.2p1_0112F.1_g054490 Hydrangea macrophylla HOM05D006230 ORTHO05D007598 2.6e-40 169.1 156 62.8
CANSAT78G0232 Cannabis sativa HOM05D006230 ORTHO05D007598 3.5e-40 168.7 133 68.4
CANSAT78G0887 Cannabis sativa HOM05D006230 ORTHO05D007598 3.5e-40 168.7 133 68.4
CAN.G220.45 Capsicum annuum HOM05D006230 ORTHO05D007598 3.5e-40 168.7 152 63.8
Atru.chr4.1981 Acer truncatum HOM05D006230 ORTHO05D007598 4.5e-40 168.3 118 72.9
ClCG05G004160 Citrullus lanatus HOM05D006230 ORTHO05D007598 4.5e-40 168.3 118 73.7
CsaV3_3G011880 Cucumis sativus L. HOM05D006230 ORTHO05D007598 4.5e-40 168.3 118 72.0
Sabra10G0038500 Salix brachista HOM05D006230 ORTHO05D007598 5.9e-40 167.9 147 64.6
Gohir.A02G041200 Gossypium hirsutum HOM05D006230 ORTHO05D007598 7.7e-40 167.5 153 64.1
Potri.010G068500 Populus trichocarpa HOM05D006230 ORTHO05D007598 2.2e-39 166.0 146 65.1
Thecc.04G260000 Theobroma cacao HOM05D006230 ORTHO05D007598 2.2e-39 166.0 124 70.2
TWI73G0434 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 2.2e-39 166.0 126 71.4
Ciclev10006136m.g Citrus clementina HOM05D006230 ORTHO05D007598 2.9e-39 165.6 157 62.4
COL.COLO4_15930 Corchorus olitorius HOM05D006230 ORTHO05D007598 3.8e-39 165.2 124 66.9
HanXRQChr14g0434851 Helianthus annuus HOM05D006230 ORTHO05D007598 3.8e-39 165.2 153 64.7
Peaxi162Scf00602g00421 Petunia axillaris HOM05D006230 ORTHO05D007598 3.8e-39 165.2 155 62.6
Gorai.005G052000 Gossypium raimondii HOM05D006230 ORTHO05D007598 5.0e-39 164.9 153 63.4
Sc13g0005900 Simmondsia chinensis HOM05D006230 ORTHO05D007598 6.5e-39 164.5 125 70.4
Lsat_1_v5_gn_2_39681 Lactuca sativa HOM05D006230 ORTHO05D007598 8.5e-39 164.1 155 61.9
Aqoxy2G03714 Aquilegia oxysepala HOM05D006230 ORTHO05D007598 1.5e-38 163.3 129 69.8
Gorai.011G177300 Gossypium raimondii HOM05D006230 ORTHO05D007598 1.9e-38 162.9 125 68.8
Duzib151G0304 Durio zibethinus HOM05D006230 ORTHO05D007598 3.2e-38 162.2 125 67.2
Duzib212G0996 Durio zibethinus HOM05D006230 ORTHO05D007598 3.2e-38 162.2 125 67.2
Cfa014753 Carpinus fangiana HOM05D006230 ORTHO05D007598 4.2e-38 161.8 152 63.2
Gohir.D02G047000 Gossypium hirsutum HOM05D006230 ORTHO05D007598 4.2e-38 161.8 153 62.7
Gohir.D10G157800 Gossypium hirsutum HOM05D006230 ORTHO05D007598 5.5e-38 161.4 125 68.0
GSVIVG01027870001 Vitis vinifera HOM05D006230 ORTHO05D007598 5.5e-38 161.4 118 72.0
Gohir.A10G109400 Gossypium hirsutum HOM05D006230 ORTHO05D007598 9.4e-38 160.6 116 69.8
Lalb_Chr01g0020881 Lupinus albus HOM05D006230 ORTHO05D007598 1.2e-37 160.2 143 62.9
Eucgr.H02995 Eucalyptus grandis HOM05D006230 ORTHO05D007598 1.6e-37 159.8 118 72.9
PSO017G6779 Papaver somniferum HOM05D006230 ORTHO05D007598 1.6e-37 159.8 140 63.6
THA.LOC104801077 Tarenaya hassleriana HOM05D006230 ORTHO05D007598 1.6e-37 159.8 153 62.1
Lalb_Chr03g0037521 Lupinus albus HOM05D006230 ORTHO05D007598 2.1e-37 159.5 143 65.0
Sp1g03290 Schrenkiella parvula HOM05D006230 ORTHO05D007598 2.1e-37 159.5 153 61.4
FvH4_4g04200 Fragaria vesca HOM05D006230 ORTHO05D007598 2.7e-37 159.1 132 66.7
PGR004G2031 Punica granatum HOM05D006230 ORTHO05D007598 2.7e-37 159.1 122 68.9
TPR.G32792 Trifolium pratense HOM05D006230 ORTHO05D007598 2.7e-37 159.1 125 69.6
PSO063G4949 Papaver somniferum HOM05D006230 ORTHO05D007598 3.6e-37 158.7 155 60.0
TWI53G0221 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 3.6e-37 158.7 118 70.3
Actinidia20827 Actinidia chinensis HOM05D006230 ORTHO05D007598 4.7e-37 158.3 120 71.7
Cpa.g.sc44.25 Carica papaya HOM05D006230 ORTHO05D007598 8.0e-37 157.5 134 61.9
Haze_11428 Corylus avellana HOM05D006230 ORTHO05D007598 1.0e-36 157.1 152 61.2
Phvul.007G278700 Phaseolus vulgaris HOM05D006230 ORTHO05D007598 1.0e-36 157.1 131 66.4
QL06p019992 Quercus lobata HOM05D006230 ORTHO05D007598 1.0e-36 157.1 151 61.6
Actinidia35808 Actinidia chinensis HOM05D006230 ORTHO05D007598 1.4e-36 156.8 154 60.4
Potri.008G169800 Populus trichocarpa HOM05D006230 ORTHO05D007598 1.4e-36 156.8 119 68.9
TAR636G3560 Trochodendron aralioides HOM05D006230 ORTHO05D007598 1.4e-36 156.8 156 58.3
AT2G33450 Arabidopsis thaliana HOM05D006230 ORTHO05D007598 1.8e-36 156.4 151 60.3
FAN12G2171 Fragaria x ananassa HOM05D006230 ORTHO05D007598 1.8e-36 156.4 132 65.9
AL1G14110 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 2.3e-36 156.0 153 60.8
AL4G29120 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 2.3e-36 156.0 151 60.9
Carub.0004s1508 Capsella rubella HOM05D006230 ORTHO05D007598 2.3e-36 156.0 151 60.3
ECA234G3973 Erigeron canadensis HOM05D006230 ORTHO05D007598 2.3e-36 156.0 134 64.9
FAN17G1889 Fragaria x ananassa HOM05D006230 ORTHO05D007598 3.0e-36 155.6 132 65.2
RcHm_v2.0_Chr4g0394691 Rosa chinensis HOM05D006230 ORTHO05D007598 4.0e-36 155.2 132 63.6
DCAR_002306 Daucus carota HOM05D006230 ORTHO05D007598 5.2e-36 154.8 126 67.5
CARHR127460 Cardamine hirsuta HOM05D006230 ORTHO05D007598 6.7e-36 154.5 151 59.6
vmacro08530 Vaccinium macrocarpon HOM05D006230 ORTHO05D007598 6.7e-36 154.5 131 64.9
Medtr1g041320 Medicago truncatula HOM05D006230 ORTHO05D007598 1.2e-35 153.7 125 67.2
Aa31LG5G3840 Aethionema arabicum HOM05D006230 ORTHO05D007598 1.5e-35 153.3 151 58.9
Manes.15G043800 Manihot esculenta HOM05D006230 ORTHO05D007598 1.5e-35 153.3 139 65.5
Sp4g15790 Schrenkiella parvula HOM05D006230 ORTHO05D007598 2.0e-35 152.9 155 60.0
Carub.0001s0365 Capsella rubella HOM05D006230 ORTHO05D007598 2.6e-35 152.5 148 59.5
Hund11917 Selenicereus undatus HOM05D006230 ORTHO05D007598 3.3e-35 152.1 152 58.6
BolC4t27775H Brassica oleracea HOM05D006230 ORTHO05D007598 5.7e-35 151.4 124 66.1
BraA04t18078Z Brassica rapa HOM05D006230 ORTHO05D007598 5.7e-35 151.4 119 68.1
Thhalv10017390m.g Eutrema salsugineum HOM05D006230 ORTHO05D007598 5.7e-35 151.4 127 66.1
Psat6g103800 Pisum sativum HOM05D006230 ORTHO05D007598 9.7e-35 150.6 127 63.8
Prupe.1G045100 Prunus persica HOM05D006230 ORTHO05D007598 9.7e-35 150.6 117 69.2
CiPaw.02G108600 Carya illinoinensis HOM05D006230 ORTHO05D007598 1.3e-34 150.2 120 69.2
Lj6g0026311 Lotus japonicus HOM05D006230 ORTHO05D007598 1.3e-34 150.2 125 65.6
Glyma.10G002600 Glycine max HOM05D006230 ORTHO05D007598 1.7e-34 149.8 119 68.1
MD16G1223800 Malus domestica HOM05D006230 ORTHO05D007598 2.8e-34 149.1 122 64.8
ATR0736G074 Amborella trichopoda HOM05D006230 ORTHO05D007598 3.7e-34 148.7 144 61.8
A04p25750 Brassica napus HOM05D006230 ORTHO05D007598 4.8e-34 148.3 120 68.3
C04p62980 Brassica napus HOM05D006230 ORTHO05D007598 4.8e-34 148.3 124 65.3
Ca_05177_v3 Cicer arietinum L. HOM05D006230 ORTHO05D007598 4.8e-34 148.3 152 57.2
BcaB02g10562 Brassica carinata HOM05D006230 ORTHO05D007598 1.4e-33 146.7 120 68.3
BcaB06g28689 Brassica carinata HOM05D006230 ORTHO05D007598 1.4e-33 146.7 120 67.5
Os05g0101400 Oryza sativa ssp. japonica HOM05D006230 ORTHO05D007598 1.4e-33 146.7 125 60.8
CDE05G0971 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 1.8e-33 146.4 86 80.2
Zm00001eb222850 Zea mays HOM05D006230 ORTHO05D007598 5.3e-33 144.8 124 63.7
BcaC02g07821 Brassica carinata HOM05D006230 ORTHO05D007598 7.0e-33 144.4 120 65.0
CDE11G0022 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 7.0e-33 144.4 88 78.4
HPP92_012809 Vanilla planifolia HOM05D006230 ORTHO05D007598 1.6e-32 143.3 123 63.4
BcaC02g11431 Brassica carinata HOM05D006230 ORTHO05D007598 4.5e-32 141.7 130 64.6
C04p15650 Brassica napus HOM05D006230 ORTHO05D007598 4.5e-32 141.7 130 64.6
MD13G1218400 Malus domestica HOM05D006230 ORTHO05D007598 4.5e-32 141.7 113 66.4
Zm00001eb047510 Zea mays HOM05D006230 ORTHO05D007598 1.7e-31 139.8 125 61.6
arahy.Tifrunner.gnm1.ann1.ADZ0J4 Arachis hypogaea HOM05D006230 ORTHO05D007598 5.0e-31 138.3 78 87.2
Thecc.10G124200 Theobroma cacao HOM05D006230 ORTHO05D007598 1.2e-29 133.7 104 66.3
BolC4t23134H Brassica oleracea HOM05D006230 ORTHO05D007598 2.1e-29 132.9 131 62.6
Prupe.8G083300 Prunus persica HOM05D006230 ORTHO05D007598 1.5e-27 126.7 82 76.8
RcHm_v2.0_Chr4g0394651 Rosa chinensis HOM05D006230 ORTHO05D007598 2.0e-27 126.3 133 52.6
Rhsim04G0174900 Rhododendron simsii HOM05D006230 ORTHO05D007598 3.7e-26 122.1 94 70.2
SEGI_13554 Sequoiadendron giganteum HOM05D006230 ORTHO05D007598 8.3e-26 120.9 138 51.4
MD00G1118000 Malus domestica HOM05D006230 ORTHO05D007598 1.4e-25 120.2 75 72.0
Ah.04g155450 Amaranthus hybridus HOM05D000071 ORTHO05D007598 4.5e-24 115.2 94 61.7
AagrBONN_evm.TU.Sc2ySwM_228.3795 Anthoceros agrestis HOM05D006230 ORTHO05D007598 5.9e-24 114.8 124 50.0
Pp3c5_28500 Physcomitrium patens HOM05D006230 ORTHO05D007598 4.2e-22 108.6 122 54.1
Pp3c6_1140 Physcomitrium patens HOM05D006230 ORTHO05D007598 7.2e-22 107.8 123 52.8
Mapoly0087s0077 Marchantia polymorpha HOM05D006230 ORTHO05D007598 9.5e-22 107.5 117 52.1
SMO131G0001 Selaginella moellendorffii HOM05D006230 ORTHO05D007598 2.1e-21 106.3 75 66.7
Duzib052G0467 Durio zibethinus HOM05D006230 ORTHO05D007598 8.8e-20 100.9 96 55.2
CBR_g23072 Chara braunii HOM05D006230 ORTHO05D007598 3.1e-17 92.4 78 59.0
MSTRG.9877 Avicennia marina HOM05D006230 ORTHO05D007598 1.2e-16 90.5 74 66.2
Cre06.g265800 Chlamydomonas reinhardtii HOM05D006230 ORTHO05D007598 2.9e-15 85.9 92 50.0
MCO07G061 Micromonas commoda HOM05D006230 ORTHO05D007598 2.5e-14 82.8 106 47.2
Nn3g19733 Nelumbo nucifera HOM05D006230 ORTHO05D007598 1.7e-07 60.1 36 80.6
VMungo0684G0001 Vigna mungo HOM05D006230 ORTHO05D007598 5.0e-07 58.5 65 46.2


User provided reference genes

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