Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G00393 Erythranthe guttata HOM05D000211 ORTHO05D002517 7.4e-40 166.8 86 100.0
Gohir.A10G117200 Gossypium hirsutum HOM05D000211 ORTHO05D002517 1.8e-25 119.0 86 80.2
CSS0026014 Camellia sinensis var. sinensis HOM05D000211 ORTHO05D002517 2.3e-25 118.6 86 79.1
CSS0032213 Camellia sinensis var. sinensis HOM05D000211 ORTHO05D002517 2.3e-25 118.6 86 79.1
Cc03_g04490 Coffea canephora HOM05D000211 ORTHO05D002517 2.3e-25 118.6 86 79.1
COL.COLO4_13175 Corchorus olitorius HOM05D000211 ORTHO05D002517 2.3e-25 118.6 86 79.1
Dinv44601 Davidia involucrata HOM05D000211 ORTHO05D002517 2.3e-25 118.6 86 79.1
Duzib212G0243 Durio zibethinus HOM05D000211 ORTHO05D002517 2.3e-25 118.6 86 79.1
Eucgr.H00506 Eucalyptus grandis HOM05D000211 ORTHO05D002517 2.3e-25 118.6 86 79.1
Thecc.04G241800 Theobroma cacao HOM05D000211 ORTHO05D002517 2.3e-25 118.6 86 79.1
CSS0010452 Camellia sinensis var. sinensis HOM05D000211 ORTHO05D002517 5.2e-25 117.5 86 77.9
CDE06G0590 Ceratophyllum demersum HOM05D000211 ORTHO05D002517 5.2e-25 117.5 86 77.9
Hma1.2p1_0897F.1_g234255 Hydrangea macrophylla HOM05D000211 ORTHO05D002517 5.2e-25 117.5 86 77.9
Hma1.2p1_0897F.1_g234260 Hydrangea macrophylla HOM05D000211 ORTHO05D002517 5.2e-25 117.5 86 77.9
Peaxi162Scf00467g00913 Petunia axillaris HOM05D000211 ORTHO05D002517 5.2e-25 117.5 86 77.9
Atru.chr4.2316 Acer truncatum HOM05D000211 ORTHO05D002517 6.7e-25 117.1 86 77.9
BcaB03g14640 Brassica carinata HOM05D000211 ORTHO05D002517 6.7e-25 117.1 86 76.7
BcaC01g03407 Brassica carinata HOM05D000211 ORTHO05D002517 6.7e-25 117.1 86 76.7
A03p43090 Brassica napus HOM05D000211 ORTHO05D002517 6.7e-25 117.1 86 76.7
C03p52900 Brassica napus HOM05D000211 ORTHO05D002517 6.7e-25 117.1 86 76.7
Thhalv10020340m.g Eutrema salsugineum HOM05D000211 ORTHO05D002517 6.7e-25 117.1 86 76.7
Gohir.A09G220800 Gossypium hirsutum HOM05D000211 ORTHO05D002517 6.7e-25 117.1 86 77.9
Gohir.D09G223100 Gossypium hirsutum HOM05D000211 ORTHO05D002517 6.7e-25 117.1 86 77.9
Gorai.006G244400 Gossypium raimondii HOM05D000211 ORTHO05D002517 6.7e-25 117.1 86 77.9
MBI04_g27055_MAGBIO Magnolia biondii HOM05D000211 ORTHO05D002517 6.7e-25 117.1 86 77.9
Nn1g02515 Nelumbo nucifera HOM05D000211 ORTHO05D002517 6.7e-25 117.1 86 77.9
Nitab4.5_0000941g0100 Nicotiana tabacum HOM05D000211 ORTHO05D002517 6.7e-25 117.1 86 76.7
Nitab4.5_0002398g0070 Nicotiana tabacum HOM05D000211 ORTHO05D002517 6.7e-25 117.1 86 76.7
TWI09G1205 Tripterygium wilfordii HOM05D000211 ORTHO05D002517 6.7e-25 117.1 86 77.9
Ciclev10004616m.g Citrus clementina HOM05D000211 ORTHO05D002517 8.8e-25 116.7 86 77.9
Manes.03G171200 Manihot esculenta HOM05D000211 ORTHO05D002517 8.8e-25 116.7 86 77.9
Manes.15G034400 Manihot esculenta HOM05D000211 ORTHO05D002517 8.8e-25 116.7 86 77.9
Peaxi162Scf00788g00013 Petunia axillaris HOM05D000211 ORTHO05D002517 8.8e-25 116.7 86 75.6
TAR636G0152 Trochodendron aralioides HOM05D000211 ORTHO05D002517 8.8e-25 116.7 86 77.9
vmacro15394 Vaccinium macrocarpon HOM05D000211 ORTHO05D002517 8.8e-25 116.7 86 77.9
AL3G37350 Arabidopsis lyrata HOM05D000211 ORTHO05D002517 1.2e-24 116.3 86 76.7
AT3G22960 Arabidopsis thaliana HOM05D000211 ORTHO05D002517 1.2e-24 116.3 86 76.7
Carub.0003s2310 Capsella rubella HOM05D000211 ORTHO05D002517 1.2e-24 116.3 86 76.7
CARHR098900 Cardamine hirsuta HOM05D000211 ORTHO05D002517 1.2e-24 116.3 86 76.7
Gorai.011G167200 Gossypium raimondii HOM05D000211 ORTHO05D002517 1.2e-24 116.3 86 79.1
Sc13g0004870 Simmondsia chinensis HOM05D000211 ORTHO05D002517 1.2e-24 116.3 86 77.9
THA.LOC104808583 Tarenaya hassleriana HOM05D000211 ORTHO05D002517 1.2e-24 116.3 86 77.9
Nitab4.5_0000977g0100 Nicotiana tabacum HOM05D000211 ORTHO05D002517 1.5e-24 115.9 86 75.6
SGA_v2.0_scaffold308G48116 Striga asiatica HOM05D000211 ORTHO05D002517 1.5e-24 115.9 86 76.7
TAR262G0002 Trochodendron aralioides HOM05D000211 ORTHO05D002517 1.5e-24 115.9 86 77.9
TAR365G0034 Trochodendron aralioides HOM05D000211 ORTHO05D002517 1.5e-24 115.9 86 77.9
GSVIVG01018079001 Vitis vinifera HOM05D000211 ORTHO05D002517 1.5e-24 115.9 86 77.9
Migut.N00225 Erythranthe guttata HOM05D000211 ORTHO05D002517 2.0e-24 115.5 86 77.9
Lj6A651G58 Lonicera japonica HOM05D000211 ORTHO05D002517 2.0e-24 115.5 86 76.7
Os07g0181000 Oryza sativa ssp. japonica HOM05D000211 ORTHO05D002517 2.0e-24 115.5 86 76.7
SalBow2G3289 Salvia bowleyana HOM05D000211 ORTHO05D002517 2.0e-24 115.5 86 76.7
Aa31LG8G9460 Aethionema arabicum HOM05D000211 ORTHO05D002517 2.6e-24 115.2 86 75.6
MSTRG.9942 Avicennia marina HOM05D000211 ORTHO05D002517 2.6e-24 115.2 86 76.7
BcaC09g49230 Brassica carinata HOM05D000211 ORTHO05D002517 2.6e-24 115.2 86 75.6
A01p32160 Brassica napus HOM05D000211 ORTHO05D002517 2.6e-24 115.2 86 75.6
C01p41180 Brassica napus HOM05D000211 ORTHO05D002517 2.6e-24 115.2 86 75.6
BolC1t04072H Brassica oleracea HOM05D000211 ORTHO05D002517 2.6e-24 115.2 86 75.6
BraA01t03341Z Brassica rapa HOM05D000211 ORTHO05D002517 2.6e-24 115.2 86 75.6
Duzib151G0070 Durio zibethinus HOM05D000211 ORTHO05D002517 2.6e-24 115.2 86 77.9
PGR142G0223 Punica granatum HOM05D000211 ORTHO05D002517 2.6e-24 115.2 86 77.9
Sp3g20650 Schrenkiella parvula HOM05D000211 ORTHO05D002517 2.6e-24 115.2 86 75.6
Actinidia08455 Actinidia chinensis HOM05D000211 ORTHO05D002517 3.3e-24 114.8 86 76.7
Lj5g0020856 Lotus japonicus HOM05D000211 ORTHO05D002517 3.3e-24 114.8 86 76.7
QL06p000493 Quercus lobata HOM05D000211 ORTHO05D002517 3.3e-24 114.8 85 76.5
SGA_v2.0_scaffold79G25612 Striga asiatica HOM05D000211 ORTHO05D002517 3.3e-24 114.8 86 75.6
Cfa008411 Carpinus fangiana HOM05D000211 ORTHO05D002517 5.7e-24 114.0 86 75.6
Haze_11256 Corylus avellana HOM05D000211 ORTHO05D002517 5.7e-24 114.0 86 75.6
DCAR_027259 Daucus carota HOM05D000211 ORTHO05D002517 5.7e-24 114.0 86 75.6
PSO210G5587 Papaver somniferum HOM05D000211 ORTHO05D002517 5.7e-24 114.0 86 76.7
PSO461G0067 Papaver somniferum HOM05D000211 ORTHO05D002517 5.7e-24 114.0 86 76.7
Zm00001eb301440 Zea mays HOM05D000211 ORTHO05D002517 5.7e-24 114.0 86 74.4
Actinidia05477 Actinidia chinensis HOM05D000211 ORTHO05D002517 7.5e-24 113.6 86 76.7
Glyma.20G211200 Glycine max HOM05D000211 ORTHO05D002517 7.5e-24 113.6 86 75.6
Nitab4.5_0003815g0060 Nicotiana tabacum HOM05D000211 ORTHO05D002517 7.5e-24 113.6 86 75.6
Phvul.007G110900 Phaseolus vulgaris HOM05D000211 ORTHO05D002517 7.5e-24 113.6 86 75.6
Potri.008G159700 Populus trichocarpa HOM05D000211 ORTHO05D002517 7.5e-24 113.6 86 75.6
arahy.Tifrunner.gnm1.ann1.53XZTF Arachis hypogaea HOM05D000211 ORTHO05D002517 9.7e-24 113.2 86 75.6
BcaB04g20483 Brassica carinata HOM05D000211 ORTHO05D002517 9.7e-24 113.2 86 73.3
CiPaw.02G118500 Carya illinoinensis HOM05D000211 ORTHO05D002517 9.7e-24 113.2 86 75.6
Glyma.10G178900 Glycine max HOM05D000211 ORTHO05D002517 9.7e-24 113.2 86 74.4
Gohir.D10G150200 Gossypium hirsutum HOM05D000211 ORTHO05D002517 9.7e-24 113.2 86 76.7
ATR0665G349 Amborella trichopoda HOM05D000211 ORTHO05D002517 1.3e-23 112.8 86 75.6
CAN.G749.13 Capsicum annuum HOM05D000211 ORTHO05D002517 1.3e-23 112.8 86 73.3
Solyc09g082970.3 Solanum lycopersicum HOM05D000211 ORTHO05D002517 1.3e-23 112.8 86 73.3
Sopen09g031830 Solanum pennellii HOM05D000211 ORTHO05D002517 1.3e-23 112.8 86 73.3
VMungo0720G2850 Vigna mungo HOM05D000211 ORTHO05D002517 1.3e-23 112.8 86 75.6
Ah.13g071570 Amaranthus hybridus HOM05D000211 ORTHO05D002517 1.7e-23 112.5 86 74.4
arahy.Tifrunner.gnm1.ann1.5P7LAL Arachis hypogaea HOM05D000211 ORTHO05D002517 1.7e-23 112.5 86 74.4
AUR62041212 Chenopodium quinoa HOM05D000211 ORTHO05D002517 1.7e-23 112.5 86 73.3
MBI11_g17666_MAGBIO Magnolia biondii HOM05D000211 ORTHO05D002517 1.7e-23 112.5 86 76.7
SEGI_23068 Sequoiadendron giganteum HOM05D000211 ORTHO05D002517 1.7e-23 112.5 85 71.8
Rhsim02G0031500 Rhododendron simsii HOM05D000211 ORTHO05D002517 2.2e-23 112.1 86 74.4
Sabra08G0121700 Salix brachista HOM05D000211 ORTHO05D002517 2.2e-23 112.1 86 74.4
Aqoxy2G03495 Aquilegia oxysepala HOM05D000211 ORTHO05D002517 2.8e-23 111.7 86 74.4
Potri.010G080700 Populus trichocarpa HOM05D000211 ORTHO05D002517 2.8e-23 111.7 86 74.4
arahy.Tifrunner.gnm1.ann1.RQR8IN Arachis hypogaea HOM05D000211 ORTHO05D002517 3.7e-23 111.3 86 74.4
Ca_09885_v3 Cicer arietinum L. HOM05D000211 ORTHO05D002517 3.7e-23 111.3 86 74.4
Lalb_Chr01g0020861 Lupinus albus HOM05D000211 ORTHO05D002517 3.7e-23 111.3 86 74.4
Lalb_Chr06g0168931 Lupinus albus HOM05D000211 ORTHO05D002517 3.7e-23 111.3 86 74.4
Psat6g113960 Pisum sativum HOM05D000211 ORTHO05D002517 3.7e-23 111.3 86 74.4
Hund20654 Selenicereus undatus HOM05D000211 ORTHO05D002517 3.7e-23 111.3 86 73.3
TPR.G22811 Trifolium pratense HOM05D000211 ORTHO05D002517 3.7e-23 111.3 86 74.4
ECA233G2529 Erigeron canadensis HOM05D000211 ORTHO05D002517 4.8e-23 110.9 86 75.6
CiPaw.01G193400 Carya illinoinensis HOM05D000211 ORTHO05D002517 8.3e-23 110.2 86 73.3
ClCG06G006570 Citrullus lanatus HOM05D000211 ORTHO05D002517 8.3e-23 110.2 86 74.4
MELO3C014272.2 Cucumis melo HOM05D000211 ORTHO05D002517 8.3e-23 110.2 86 74.4
CsaV3_2G013320 Cucumis sativus L. HOM05D000211 ORTHO05D002517 8.3e-23 110.2 86 74.4
Medtr1g076540 Medicago truncatula HOM05D000211 ORTHO05D002517 8.3e-23 110.2 86 73.3
Sed0009210 Sechium edule HOM05D000211 ORTHO05D002517 8.3e-23 110.2 86 74.4
TWI73G1169 Tripterygium wilfordii HOM05D000211 ORTHO05D002517 8.3e-23 110.2 86 73.3
RcHm_v2.0_Chr4g0388881 Rosa chinensis HOM05D000211 ORTHO05D002517 1.1e-22 109.8 86 73.3
CANSAT78G1331 Cannabis sativa HOM05D000211 ORTHO05D002517 1.4e-22 109.4 86 73.3
FvH4_4g01820 Fragaria vesca HOM05D000211 ORTHO05D002517 2.4e-22 108.6 86 72.1
FAN12G1283 Fragaria x ananassa HOM05D000211 ORTHO05D002517 2.4e-22 108.6 86 72.1
FAN12G3563 Fragaria x ananassa HOM05D000211 ORTHO05D002517 2.4e-22 108.6 86 72.1
FAN17G2806 Fragaria x ananassa HOM05D000211 ORTHO05D002517 2.4e-22 108.6 86 72.1
FAN22G1099 Fragaria x ananassa HOM05D000211 ORTHO05D002517 2.4e-22 108.6 86 72.1
MD16G1202700 Malus domestica HOM05D000211 ORTHO05D002517 2.4e-22 108.6 86 72.1
Prupe.1G024200 Prunus persica HOM05D000211 ORTHO05D002517 2.4e-22 108.6 85 72.9
HanXRQChr16g0514671 Helianthus annuus HOM05D000211 ORTHO05D002517 3.1e-22 108.2 86 74.4
CDE07G1718 Ceratophyllum demersum HOM05D000211 ORTHO05D002517 4.1e-22 107.8 80 76.2
TWI53G1723 Tripterygium wilfordii HOM05D000211 ORTHO05D002517 4.1e-22 107.8 86 73.3
Zm00001eb060760 Zea mays HOM05D000211 ORTHO05D002517 4.1e-22 107.8 86 73.3
BolC3t17555H Brassica oleracea HOM05D000211 ORTHO05D002517 7.0e-22 107.1 80 75.0
BraA03t13451Z Brassica rapa HOM05D000211 ORTHO05D002517 7.0e-22 107.1 80 75.0
Sed0002520 Sechium edule HOM05D000211 ORTHO05D002517 9.1e-22 106.7 86 72.1
MD13G1202600 Malus domestica HOM05D000211 ORTHO05D002517 1.2e-21 106.3 86 70.9
THA.LOC104822803 Tarenaya hassleriana HOM05D000211 ORTHO05D002517 1.6e-21 105.9 84 71.4
arahy.Tifrunner.gnm1.ann1.75KGS3 Arachis hypogaea HOM05D000211 ORTHO05D002517 5.9e-21 104.0 84 71.4
SMO116G0304 Selaginella moellendorffii HOM05D000211 ORTHO05D002517 5.9e-21 104.0 86 69.8
Dinv34558 Davidia involucrata HOM05D000211 ORTHO05D002517 1.0e-20 103.2 86 67.4
HPP92_018607 Vanilla planifolia HOM05D000211 ORTHO05D002517 1.0e-20 103.2 82 72.0
HanXRQChr15g0468861 Helianthus annuus HOM05D000211 ORTHO05D002517 1.3e-20 102.8 86 70.9
Lsat_1_v5_gn_5_68180 Lactuca sativa HOM05D000211 ORTHO05D002517 1.7e-20 102.4 83 72.3
unitig_736.g22454 Utricularia gibba HOM05D000211 ORTHO05D002517 1.7e-20 102.4 86 67.4
GSVIVG01003140001 Vitis vinifera HOM05D000211 ORTHO05D002517 2.2e-20 102.1 86 66.3
Ciclev10019453m.g Citrus clementina HOM05D000211 ORTHO05D002517 1.5e-19 99.4 86 66.3
Hund02871 Selenicereus undatus HOM05D000211 ORTHO05D002517 5.5e-19 97.4 85 64.7
Pp3c3_25400 Physcomitrium patens HOM05D000211 ORTHO05D002517 3.6e-18 94.7 91 63.7
AagrBONN_evm.TU.Sc2ySwM_344.768 Anthoceros agrestis HOM05D000211 ORTHO05D002517 6.1e-18 94.0 94 62.8
Thecc.01G269100 Theobroma cacao HOM05D000211 ORTHO05D002517 6.1e-18 94.0 85 64.7
AUR62032269 Chenopodium quinoa HOM05D000211 ORTHO05D002517 8.0e-18 93.6 86 66.3
AUR62011956 Chenopodium quinoa HOM05D000211 ORTHO05D002517 1.0e-17 93.2 86 66.3
EL10Ac5g10479 Beta vulgaris HOM05D000211 ORTHO05D002517 1.4e-17 92.8 86 62.8
Duzib211G0394 Durio zibethinus HOM05D000211 ORTHO05D002517 3.0e-17 91.7 85 62.4
Ah.11g050080 Amaranthus hybridus HOM05D000211 ORTHO05D002517 4.0e-17 91.3 84 64.3
COL.COLO4_06096 Corchorus olitorius HOM05D000211 ORTHO05D002517 4.0e-17 91.3 86 60.5
Mapoly0070s0058 Marchantia polymorpha HOM05D000211 ORTHO05D002517 5.2e-17 90.9 94 59.6
AagrBONN_evm.TU.Sc2ySwM_344.4845 Anthoceros agrestis HOM05D000211 ORTHO05D002517 8.8e-17 90.1 91 59.3
Gohir.A08G187700 Gossypium hirsutum HOM05D000211 ORTHO05D002517 1.5e-16 89.4 85 62.4
Pp3c4_11860 Physcomitrium patens HOM05D000211 ORTHO05D002517 1.5e-16 89.4 91 59.3
Gohir.D08G206000 Gossypium hirsutum HOM05D000211 ORTHO05D002517 2.0e-16 89.0 85 61.2
Gorai.004G218100 Gossypium raimondii HOM05D000211 ORTHO05D002517 2.0e-16 89.0 85 61.2
Mapoly0065s0034 Marchantia polymorpha HOM05D000211 ORTHO05D002517 2.6e-16 88.6 95 60.0
Pp3c12_16120 Physcomitrium patens HOM05D000211 ORTHO05D002517 9.8e-16 86.7 91 58.2
Oeu064228.1 Olea europaea HOM05D000211 ORTHO05D002517 5.4e-14 80.9 75 61.3
CBR_g38623 Chara braunii HOM05D000211 ORTHO05D002517 2.9e-12 75.1 92 50.0
CBR_g38625 Chara braunii HOM05D000211 ORTHO05D002517 2.9e-12 75.1 92 50.0
Pp3c19_11090 Physcomitrium patens HOM05D000211 ORTHO05D002517 2.9e-12 75.1 80 55.0
CBR_g3803 Chara braunii HOM05D000211 ORTHO05D002517 4.7e-10 67.8 92 44.6
SEGI_21223 Sequoiadendron giganteum HOM05D000211 ORTHO05D002517 8.0e-10 67.0 76 57.9
DCAR_002690 Daucus carota HOM05D003696 ORTHO05D005158 3.0e-09 65.1 64 56.2
Pp3c22_21680 Physcomitrium patens HOM05D000211 ORTHO05D002517 4.0e-09 64.7 91 48.4
Pp3c22_21700 Physcomitrium patens HOM05D000211 ORTHO05D002517 4.0e-09 64.7 91 48.4
MBI16_g05033_MAGBIO Magnolia biondii HOM05D000211 ORTHO05D002517 2.8e-07 58.5 94 44.7
unitig_899.g14882 Utricularia gibba HOM05D000211 ORTHO05D002517 1.4e-06 56.2 26 100.0
Rhsim11G0149900 Rhododendron simsii HOM05D000211 ORTHO05D002517 1.8e-06 55.8 80 46.2
SGA_v2.0_scaffold519G52681 Striga asiatica HOM05D000211 ORTHO05D002517 4.1e-06 54.7 93 40.9
Dinv16066 Davidia involucrata HOM05D000211 ORTHO05D002517 9.2e-06 53.5 78 44.9
Medtr1g105965 Medicago truncatula HOM05D000211 ORTHO05D002517 9.2e-06 53.5 93 39.8
Prupe.8G151100 Prunus persica HOM05D000211 ORTHO05D002517 9.2e-06 53.5 93 43.0


User provided reference genes

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