Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G00360 Erythranthe guttata HOM05D007411 ORTHO05D009025 7.1e-103 377.5 221 100.0
SGA_v2.0_scaffold151G36714 Striga asiatica HOM05D007411 ORTHO05D009025 6.6e-40 168.3 219 48.4
SalBow2G3064 Salvia bowleyana HOM05D007411 ORTHO05D009025 2.1e-38 163.3 198 45.5
Solyc09g082310.2 Solanum lycopersicum HOM05D007411 ORTHO05D009025 1.9e-31 140.2 129 52.7
Sopen09g031190 Solanum pennellii HOM05D007411 ORTHO05D009025 1.9e-31 140.2 129 52.7
CAN.G1094.25 Capsicum annuum HOM05D007411 ORTHO05D009025 4.3e-31 139.0 129 53.5
Nitab4.5_0004062g0070 Nicotiana tabacum HOM05D007411 ORTHO05D009025 4.3e-31 139.0 124 52.4
Nitab4.5_0002307g0080 Nicotiana tabacum HOM05D007411 ORTHO05D009025 7.3e-31 138.3 104 58.7
Dinv14014 Davidia involucrata HOM05D007411 ORTHO05D009025 1.8e-29 133.7 120 55.8
Hma1.2p1_1572F.1_g291440 Hydrangea macrophylla HOM05D007411 ORTHO05D009025 9.8e-28 127.9 159 45.9
Hma1.2p1_2201F.1_g317040 Hydrangea macrophylla HOM05D007411 ORTHO05D009025 9.8e-28 127.9 159 45.9
Prupe.1G017200 Prunus persica HOM05D007411 ORTHO05D009025 1.7e-27 127.1 150 46.0
Actinidia23528 Actinidia chinensis HOM05D007411 ORTHO05D009025 2.7e-25 119.8 130 44.6
Peaxi162Scf00092g00336 Petunia axillaris HOM05D007411 ORTHO05D009025 6.0e-25 118.6 92 53.3
ECA236G4939 Erigeron canadensis HOM05D007411 ORTHO05D009025 2.3e-24 116.7 126 46.8
MD13G1196400 Malus domestica HOM05D007411 ORTHO05D009025 8.6e-24 114.8 118 49.2
QL06p001698 Quercus lobata HOM05D007411 ORTHO05D009025 8.6e-24 114.8 180 39.4
FvH4_4g15980 Fragaria vesca HOM05D007411 ORTHO05D009025 1.5e-23 114.0 104 51.0
FAN12G4330 Fragaria x ananassa HOM05D007411 ORTHO05D009025 1.9e-23 113.6 104 51.0
FAN07G0509 Fragaria x ananassa HOM05D007411 ORTHO05D009025 3.3e-23 112.8 124 47.6
MELO3C012663.2 Cucumis melo HOM05D007411 ORTHO05D009025 4.3e-23 112.5 109 46.8
MD16G1196900 Malus domestica HOM05D007411 ORTHO05D009025 4.3e-23 112.5 94 54.3
FAN17G1166 Fragaria x ananassa HOM05D007411 ORTHO05D009025 5.6e-23 112.1 104 51.0
CsaV3_7G022390 Cucumis sativus L. HOM05D007411 ORTHO05D009025 7.3e-23 111.7 116 44.8
C06p16920 Brassica napus HOM05D007411 ORTHO05D009025 1.6e-22 110.5 125 41.6
Ciclev10006648m.g Citrus clementina HOM05D007411 ORTHO05D009025 2.1e-22 110.2 108 51.9
A05p15610 Brassica napus HOM05D007411 ORTHO05D009025 6.2e-22 108.6 127 42.5
A05p16750 Brassica napus HOM05D007411 ORTHO05D009025 6.2e-22 108.6 127 42.5
FAN22G0418 Fragaria x ananassa HOM05D007411 ORTHO05D009025 6.2e-22 108.6 104 49.0
AT4G14805 Arabidopsis thaliana HOM05D007411 ORTHO05D009025 1.1e-21 107.8 107 47.7
BraA05t20579Z Brassica rapa HOM05D007411 ORTHO05D009025 1.1e-21 107.8 127 42.5
Sp7g12940 Schrenkiella parvula HOM05D007411 ORTHO05D009025 1.1e-21 107.8 107 47.7
BolC6t36888H Brassica oleracea HOM05D007411 ORTHO05D009025 1.4e-21 107.5 197 32.5
BraA05t20476Z Brassica rapa HOM05D007411 ORTHO05D009025 2.3e-21 106.7 203 33.5
BcaC02g11603 Brassica carinata HOM05D007411 ORTHO05D009025 3.1e-21 106.3 127 40.9
C04p13410 Brassica napus HOM05D007411 ORTHO05D009025 3.1e-21 106.3 127 40.9
Cfa008473 Carpinus fangiana HOM05D007411 ORTHO05D009025 3.1e-21 106.3 102 51.0
Lsat_1_v5_gn_9_80381 Lactuca sativa HOM05D007411 ORTHO05D009025 3.1e-21 106.3 106 46.2
Potri.010G085000 Populus trichocarpa HOM05D007411 ORTHO05D009025 3.1e-21 106.3 109 47.7
TWI09G1055 Tripterygium wilfordii HOM05D007411 ORTHO05D009025 3.1e-21 106.3 154 38.3
BcaC08g44271 Brassica carinata HOM05D007411 ORTHO05D009025 4.0e-21 105.9 127 41.7
ClCG06G006330 Citrullus lanatus HOM05D007411 ORTHO05D009025 4.0e-21 105.9 136 39.7
THA.LOC104808560 Tarenaya hassleriana HOM05D007411 ORTHO05D009025 4.0e-21 105.9 116 45.7
arahy.Tifrunner.gnm1.ann1.SC2WWN Arachis hypogaea HOM05D007411 ORTHO05D009025 5.2e-21 105.5 100 50.0
arahy.Tifrunner.gnm1.ann1.UE7NK8 Arachis hypogaea HOM05D007411 ORTHO05D009025 5.2e-21 105.5 100 50.0
CiPaw.01G198400 Carya illinoinensis HOM05D007411 ORTHO05D009025 6.8e-21 105.1 106 49.1
BcaB02g07857 Brassica carinata HOM05D007411 ORTHO05D009025 1.5e-20 104.0 105 46.7
BcaB04g18262 Brassica carinata HOM05D007411 ORTHO05D009025 1.5e-20 104.0 128 40.6
CARHR221360 Cardamine hirsuta HOM05D007411 ORTHO05D009025 1.5e-20 104.0 125 45.6
AL7G41060 Arabidopsis lyrata HOM05D007411 ORTHO05D009025 2.0e-20 103.6 117 45.3
CSS0014995 Camellia sinensis var. sinensis HOM05D007411 ORTHO05D009025 2.0e-20 103.6 90 54.4
Thhalv10027383m.g Eutrema salsugineum HOM05D007411 ORTHO05D009025 2.0e-20 103.6 115 41.7
Nn6g34119 Nelumbo nucifera HOM05D007411 ORTHO05D009025 2.0e-20 103.6 115 47.8
Gohir.A09G217300 Gossypium hirsutum HOM05D007411 ORTHO05D009025 4.4e-20 102.4 101 51.5
DCAR_027228 Daucus carota HOM05D002080 ORTHO05D002062 1.3e-19 100.9 96 45.8
HanXRQChr05g0131941 Helianthus annuus HOM05D007411 ORTHO05D009025 1.7e-19 100.5 102 46.1
Gohir.D09G219700 Gossypium hirsutum HOM05D007411 ORTHO05D009025 2.9e-19 99.8 170 39.4
Gorai.006G240700 Gossypium raimondii HOM05D007411 ORTHO05D009025 3.7e-19 99.4 170 39.4
RcHm_v2.0_Chr4g0415591 Rosa chinensis HOM05D007411 ORTHO05D009025 3.7e-19 99.4 97 52.6
BcaC07g37855 Brassica carinata HOM05D007411 ORTHO05D009025 4.9e-19 99.0 122 42.6
BolC8t48245H Brassica oleracea HOM05D007411 ORTHO05D009025 4.9e-19 99.0 122 42.6
BraA08t33142Z Brassica rapa HOM05D007411 ORTHO05D009025 6.4e-19 98.6 122 41.8
Duzib151G0508 Durio zibethinus HOM05D007411 ORTHO05D009025 6.4e-19 98.6 92 47.8
Aqoxy5G00439 Aquilegia oxysepala HOM05D007411 ORTHO05D009025 8.3e-19 98.2 109 43.1
A08p11480 Brassica napus HOM05D007411 ORTHO05D009025 8.3e-19 98.2 122 41.8
Glyma.01G235100 Glycine max HOM05D007411 ORTHO05D009025 8.3e-19 98.2 100 45.0
Sed0024167 Sechium edule HOM05D007411 ORTHO05D009025 8.3e-19 98.2 121 38.8
Ca_24421_v3 Cicer arietinum L. HOM05D007411 ORTHO05D009025 2.4e-18 96.7 108 45.4
PGR004G0639 Punica granatum HOM05D007411 ORTHO05D009025 3.2e-18 96.3 104 44.2
LjContig00222g0000468 Lotus japonicus HOM05D007411 ORTHO05D009025 7.1e-18 95.1 107 45.8
CANSAT78G1457 Cannabis sativa HOM05D007411 ORTHO05D009025 1.6e-17 94.0 113 40.7
Manes.03G176101 Manihot esculenta HOM05D007411 ORTHO05D009025 2.1e-17 93.6 103 46.6
Atru.chr4.2432 Acer truncatum HOM05D007411 ORTHO05D009025 6.0e-17 92.0 94 47.9
Thecc.04G235100 Theobroma cacao HOM05D007411 ORTHO05D009025 6.0e-17 92.0 72 55.6
RcHm_v2.0_Chr4g0391821 Rosa chinensis HOM05D007411 ORTHO05D009025 1.0e-16 91.3 105 46.7
Sc13g0004560 Simmondsia chinensis HOM05D007411 ORTHO05D009025 1.0e-16 91.3 101 42.6
Medtr5g006900 Medicago truncatula HOM05D007411 ORTHO05D009025 1.3e-16 90.9 100 46.0
Cpa.g.sc58.79 Carica papaya HOM05D007411 ORTHO05D009025 2.3e-16 90.1 144 40.3
PSO210G5563 Papaver somniferum HOM05D007411 ORTHO05D009025 2.3e-16 90.1 99 43.4
PSO832G1886 Papaver somniferum HOM05D007411 ORTHO05D009025 3.9e-16 89.4 99 43.4
VMungo1215G0970 Vigna mungo HOM05D007411 ORTHO05D009025 5.1e-16 89.0 99 47.5
Phvul.002G042700 Phaseolus vulgaris HOM05D007411 ORTHO05D009025 8.6e-16 88.2 123 42.3
TAR633G2267 Trochodendron aralioides HOM05D007411 ORTHO05D009025 8.6e-16 88.2 97 45.4
Carub.0007s2732 Capsella rubella HOM05D007411 ORTHO05D009025 1.1e-15 87.8 88 45.5
COL.COLO4_21515 Corchorus olitorius HOM05D007411 ORTHO05D009025 1.1e-15 87.8 80 48.8
Psat2g190000 Pisum sativum HOM05D007411 ORTHO05D009025 1.5e-15 87.4 107 41.1
Lalb_Chr05g0211151 Lupinus albus HOM05D007411 ORTHO05D009025 1.9e-15 87.0 98 43.9
Medtr2g049980 Medicago truncatula HOM05D007411 ORTHO05D009025 3.3e-15 86.3 100 44.0
Eucgr.H03438 Eucalyptus grandis HOM05D007411 ORTHO05D009025 5.6e-15 85.5 117 40.2
Psat7g023320 Pisum sativum HOM05D007411 ORTHO05D009025 9.5e-15 84.7 107 43.0
CDE05G0749 Ceratophyllum demersum HOM05D007411 ORTHO05D009025 1.6e-14 84.0 107 41.1
TPR.G3913 Trifolium pratense HOM05D007411 ORTHO05D009025 3.6e-14 82.8 94 44.7
LjContig00222g0003473 Lotus japonicus HOM05D007411 ORTHO05D009025 3.1e-13 79.7 124 42.7
MBI11_g32995_MAGBIO Magnolia biondii HOM05D007411 ORTHO05D009025 1.5e-12 77.4 178 33.1
Potri.008G155300 Populus trichocarpa HOM05D007411 ORTHO05D009025 4.9e-11 72.4 83 41.0
Peaxi162Scf00092g00337 Petunia axillaris HOM05D007411 ORTHO05D009025 1.6e-09 67.4 54 51.9
Zm00001eb408970 Zea mays HOM05D032292 ORTHO05D009025 1.5e-07 60.8 138 31.2
FvH4_3g08061 Fragaria vesca HOM05D007411 ORTHO05D009025 3.3e-07 59.7 52 53.8
Actinidia06458 Actinidia chinensis HOM05D040481 ORTHO05D009025 5.6e-07 58.9 141 29.1
SEGI_16230 Sequoiadendron giganteum HOM05D000489 ORTHO05D000372 9.6e-07 58.2 97 36.1
SEGI_32233 Sequoiadendron giganteum HOM05D000489 ORTHO05D000372 9.6e-07 58.2 97 36.1
TAR633G1834 Trochodendron aralioides HOM05D007411 ORTHO05D009025 9.6e-07 58.2 89 36.0
CAN.G158.7 Capsicum annuum HOM05D001204 ORTHO05D001428 6.2e-06 55.5 99 35.4
SGA_v2.0_scaffold8G04510 Striga asiatica HOM05D000489 ORTHO05D000372 8.1e-06 55.1 93 37.6
TAR633G0575 Trochodendron aralioides HOM05D007411 ORTHO05D009025 8.1e-06 55.1 84 34.5


User provided reference genes

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