Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G00301 Erythranthe guttata HOM05D004989 ORTHO05D006335 9.4e-201 703.4 366 100.0
MSTRG.4001 Avicennia marina HOM05D004989 ORTHO05D006335 2.4e-164 582.4 359 82.2
SalBow2G0224 Salvia bowleyana HOM05D004989 ORTHO05D006335 7.8e-163 577.4 377 79.8
Cc03_g03230 Coffea canephora HOM05D004989 ORTHO05D006335 5.8e-150 534.6 359 74.9
Dinv38405 Davidia involucrata HOM05D004989 ORTHO05D006335 5.8e-150 534.6 359 76.9
MSTRG.10011 Avicennia marina HOM05D004989 ORTHO05D006335 3.7e-149 531.9 311 84.9
Peaxi162Scf00134g02033 Petunia axillaris HOM05D004989 ORTHO05D006335 6.4e-149 531.2 355 75.8
HanXRQChr12g0359311 Helianthus annuus HOM05D004989 ORTHO05D006335 1.0e-146 523.9 362 73.5
CAN.G69.27 Capsicum annuum HOM05D004989 ORTHO05D006335 9.5e-145 517.3 311 81.0
unitig_736.g22488 Utricularia gibba HOM05D004989 ORTHO05D006335 9.5e-145 517.3 364 74.5
Dinv44490 Davidia involucrata HOM05D004989 ORTHO05D006335 1.6e-144 516.5 359 73.8
CSS0000312 Camellia sinensis var. sinensis HOM05D004989 ORTHO05D006335 2.8e-144 515.8 367 73.0
RcHm_v2.0_Chr4g0417841 Rosa chinensis HOM05D004989 ORTHO05D006335 2.3e-143 512.7 361 72.3
FvH4_4g14760 Fragaria vesca HOM05D004989 ORTHO05D006335 5.2e-143 511.5 361 72.6
CSS0017868 Camellia sinensis var. sinensis HOM05D004989 ORTHO05D006335 8.9e-143 510.8 373 72.9
Solyc01g079860.3 Solanum lycopersicum HOM05D004989 ORTHO05D006335 1.5e-142 510.0 311 80.7
Sopen01g031620 Solanum pennellii HOM05D004989 ORTHO05D006335 1.5e-142 510.0 311 80.4
Cfa015597 Carpinus fangiana HOM05D004989 ORTHO05D006335 2.6e-142 509.2 369 71.8
CANSAT78G0752 Cannabis sativa HOM05D004989 ORTHO05D006335 4.4e-142 508.4 362 72.4
Prupe.1G152800 Prunus persica HOM05D004989 ORTHO05D006335 4.4e-142 508.4 358 72.9
GSVIVG01017902001 Vitis vinifera HOM05D004989 ORTHO05D006335 1.7e-141 506.5 359 73.8
TAR365G0616 Trochodendron aralioides HOM05D004989 ORTHO05D006335 2.2e-141 506.1 362 72.1
MD16G1186000 Malus domestica HOM05D004989 ORTHO05D006335 3.7e-141 505.4 366 71.3
CiPaw.02G093300 Carya illinoinensis HOM05D004989 ORTHO05D006335 6.4e-141 504.6 360 71.9
ECA234G2869 Erigeron canadensis HOM05D004989 ORTHO05D006335 1.1e-140 503.8 312 78.8
Aqoxy3G00936 Aquilegia oxysepala HOM05D004989 ORTHO05D006335 1.4e-140 503.4 361 70.6
EL10Ac3g05973 Beta vulgaris HOM05D004989 ORTHO05D006335 3.2e-140 502.3 361 70.9
Ca_00634_v3 Cicer arietinum L. HOM05D004989 ORTHO05D006335 4.6e-139 498.4 374 70.9
Oeu042787.2 Olea europaea HOM05D004989 ORTHO05D006335 4.6e-139 498.4 431 63.3
arahy.Tifrunner.gnm1.ann1.L7AGGG Arachis hypogaea HOM05D004989 ORTHO05D006335 7.8e-139 497.7 370 71.1
PSO017G3853 Papaver somniferum HOM05D004989 ORTHO05D006335 1.0e-138 497.3 370 68.4
FAN17G0130 Fragaria x ananassa HOM05D004989 ORTHO05D006335 2.3e-138 496.1 380 68.2
Lj6g0002948 Lotus japonicus HOM05D004989 ORTHO05D006335 3.9e-138 495.4 363 70.2
arahy.Tifrunner.gnm1.ann1.8A1ZYN Arachis hypogaea HOM05D004989 ORTHO05D006335 6.6e-138 494.6 370 70.8
vmacro15315 Vaccinium macrocarpon HOM05D004989 ORTHO05D006335 6.6e-138 494.6 359 72.1
Medtr2g022530 Medicago truncatula HOM05D004989 ORTHO05D006335 2.5e-137 492.7 359 71.9
QL06p003872 Quercus lobata HOM05D004989 ORTHO05D006335 3.3e-137 492.3 374 69.3
Lalb_Chr18g0056141 Lupinus albus HOM05D004989 ORTHO05D006335 4.3e-137 491.9 359 71.9
Gorai.005G041000 Gossypium raimondii HOM05D004989 ORTHO05D006335 5.6e-137 491.5 373 68.9
Manes.03G183100 Manihot esculenta HOM05D004989 ORTHO05D006335 7.3e-137 491.1 363 70.8
Glyma.07G257800 Glycine max HOM05D004989 ORTHO05D006335 1.2e-136 490.3 361 70.4
Nitab4.5_0005927g0020 Nicotiana tabacum HOM05D004989 ORTHO05D006335 1.6e-136 490.0 381 69.0
Glyma.17G016200 Glycine max HOM05D004989 ORTHO05D006335 2.1e-136 489.6 360 70.8
Gohir.A02G029300 Gossypium hirsutum HOM05D004989 ORTHO05D006335 2.1e-136 489.6 373 69.2
Gohir.D02G037100 Gossypium hirsutum HOM05D004989 ORTHO05D006335 2.8e-136 489.2 373 68.6
CDE07G1289 Ceratophyllum demersum HOM05D004989 ORTHO05D006335 3.6e-136 488.8 364 68.4
Aa31LG11G10490 Aethionema arabicum HOM05D004989 ORTHO05D006335 8.1e-136 487.6 364 70.6
Thecc.04G224100 Theobroma cacao HOM05D004989 ORTHO05D006335 8.1e-136 487.6 373 70.0
VMungo1215G0587 Vigna mungo HOM05D004989 ORTHO05D006335 8.1e-136 487.6 361 69.5
Potri.008G203600 Populus trichocarpa HOM05D004989 ORTHO05D006335 1.8e-135 486.5 360 70.3
AUR62026218 Chenopodium quinoa HOM05D004989 ORTHO05D006335 6.8e-135 484.6 352 71.3
Nn1g02182 Nelumbo nucifera HOM05D004989 ORTHO05D006335 6.8e-135 484.6 362 68.2
Nitab4.5_0000630g0050 Nicotiana tabacum HOM05D004989 ORTHO05D006335 6.8e-135 484.6 287 82.6
PGSC0003DMG400009024 Solanum tuberosum HOM05D004989 ORTHO05D006335 1.2e-134 483.8 289 82.4
MELO3C006557.2 Cucumis melo HOM05D004989 ORTHO05D006335 2.6e-134 482.6 360 70.0
PSO478G2898 Papaver somniferum HOM05D004989 ORTHO05D006335 3.4e-134 482.3 312 76.3
MBI14_g28267_MAGBIO Magnolia biondii HOM05D004989 ORTHO05D006335 9.9e-134 480.7 353 70.3
Sed0017941 Sechium edule HOM05D004989 ORTHO05D006335 1.3e-133 480.3 367 68.4
RcHm_v2.0_Chr0c32g0501661 Rosa chinensis HOM05D004989 ORTHO05D006335 4.9e-133 478.4 349 71.6
Phvul.003G091700 Phaseolus vulgaris HOM05D004989 ORTHO05D006335 6.4e-133 478.0 317 75.4
Rhsim02G0020900 Rhododendron simsii HOM05D004989 ORTHO05D006335 8.4e-133 477.6 397 64.2
Atru.chr4.2544 Acer truncatum HOM05D004989 ORTHO05D006335 1.4e-132 476.9 306 78.8
CsaV3_3G013610 Cucumis sativus L. HOM05D004989 ORTHO05D006335 1.9e-132 476.5 360 69.2
Thhalv10013830m.g Eutrema salsugineum HOM05D004989 ORTHO05D006335 5.4e-132 474.9 364 68.1
FAN22G1009 Fragaria x ananassa HOM05D004989 ORTHO05D006335 5.4e-132 474.9 376 66.5
AT5G19150 Arabidopsis thaliana HOM05D004989 ORTHO05D006335 9.3e-132 474.2 364 68.4
AL6G30570 Arabidopsis lyrata HOM05D004989 ORTHO05D006335 7.8e-131 471.1 364 68.1
Eucgr.B01122 Eucalyptus grandis HOM05D004989 ORTHO05D006335 7.8e-131 471.1 365 65.5
Carub.0006s1748 Capsella rubella HOM05D004989 ORTHO05D006335 2.3e-130 469.5 364 67.3
BcaB01g04874 Brassica carinata HOM05D004989 ORTHO05D006335 3.0e-130 469.2 364 67.0
RcHm_v2.0_Chr0c32g0501471 Rosa chinensis HOM05D004989 ORTHO05D006335 3.0e-130 469.2 362 67.7
CARHR193800 Cardamine hirsuta HOM05D004989 ORTHO05D006335 8.7e-130 467.6 364 68.1
Sp6g25210 Schrenkiella parvula HOM05D004989 ORTHO05D006335 8.7e-130 467.6 364 67.0
THA.LOC104818802 Tarenaya hassleriana HOM05D004989 ORTHO05D006335 8.7e-130 467.6 371 65.8
BolC3t13560H Brassica oleracea HOM05D004989 ORTHO05D006335 1.9e-129 466.5 360 68.3
COL.COLO4_26626 Corchorus olitorius HOM05D004989 ORTHO05D006335 1.9e-129 466.5 412 61.7
Os11g0276300 Oryza sativa ssp. japonica HOM05D004989 ORTHO05D006335 1.9e-129 466.5 364 65.4
HPP92_005520 Vanilla planifolia HOM05D004989 ORTHO05D006335 2.5e-129 466.1 362 66.9
Ah.07g202120 Amaranthus hybridus HOM05D004989 ORTHO05D006335 3.3e-129 465.7 361 67.0
Hund12013 Selenicereus undatus HOM05D004989 ORTHO05D006335 4.3e-129 465.3 319 71.5
ATR0743G104 Amborella trichopoda HOM05D004989 ORTHO05D006335 7.3e-129 464.5 352 67.6
BraA02t05485Z Brassica rapa HOM05D004989 ORTHO05D006335 1.6e-128 463.4 316 73.7
Sabra08G0157900 Salix brachista HOM05D004989 ORTHO05D006335 2.1e-128 463.0 396 63.1
BcaB01g05136 Brassica carinata HOM05D004989 ORTHO05D006335 8.1e-128 461.1 360 67.5
BraA03t10257Z Brassica rapa HOM05D004989 ORTHO05D006335 1.1e-127 460.7 377 64.7
Zm00001eb168810 Zea mays HOM05D004989 ORTHO05D006335 1.1e-127 460.7 318 69.5
BcaC03g13646 Brassica carinata HOM05D004989 ORTHO05D006335 6.9e-127 458.0 316 72.8
BolC2t06940H Brassica oleracea HOM05D004989 ORTHO05D006335 6.9e-127 458.0 316 72.8
A03p09380 Brassica napus HOM05D004989 ORTHO05D006335 2.6e-126 456.1 355 67.9
C03p10950 Brassica napus HOM05D004989 ORTHO05D006335 3.4e-126 455.7 369 65.3
BcaB05g23373 Brassica carinata HOM05D004989 ORTHO05D006335 4.4e-126 455.3 316 72.8
RcHm_v2.0_Chr3g0483801 Rosa chinensis HOM05D004989 ORTHO05D006335 2.2e-125 453.0 281 80.4
A02p05270 Brassica napus HOM05D004989 ORTHO05D006335 4.2e-124 448.7 307 73.6
C02p10390 Brassica napus HOM05D004989 ORTHO05D006335 3.5e-123 445.7 324 70.1
Sc13g0004100 Simmondsia chinensis HOM05D004989 ORTHO05D006335 3.0e-122 442.6 305 73.4
TWI73G0966 Tripterygium wilfordii HOM05D004989 ORTHO05D006335 5.1e-122 441.8 362 66.3
C03p10960 Brassica napus HOM05D004989 ORTHO05D006335 1.9e-121 439.9 364 64.6
Haze_00947 Corylus avellana HOM05D004989 ORTHO05D006335 5.6e-121 438.3 357 65.3
Actinidia36991 Actinidia chinensis HOM05D004989 ORTHO05D006335 1.1e-119 434.1 364 64.6
Lj6g0017812 Lotus japonicus HOM05D004989 ORTHO05D006335 2.0e-118 429.9 315 69.2
Ciclev10005119m.g Citrus clementina HOM05D004989 ORTHO05D006335 1.3e-117 427.2 301 71.8
Lj6A574T37 Lonicera japonica HOM05D004989 ORTHO05D006335 8.4e-117 424.5 243 85.6
Psat1g182800 Pisum sativum HOM05D004989 ORTHO05D006335 1.1e-116 424.1 253 82.6
Hma1.2p1_2553F.1_g324330 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 3.5e-115 419.1 254 83.1
Mapoly0063s0079 Marchantia polymorpha HOM05D004989 ORTHO05D006335 1.5e-102 377.1 317 60.9
SMO361G0104 Selaginella moellendorffii HOM05D004989 ORTHO05D006335 2.2e-101 373.2 306 62.4
CBR_g26053 Chara braunii HOM05D004989 ORTHO05D006335 4.6e-99 365.5 337 55.2
C03p10910 Brassica napus HOM05D004989 ORTHO05D006335 1.9e-97 360.1 257 72.0
SGA_v2.0_scaffold39G15320 Striga asiatica HOM05D004989 ORTHO05D006335 4.8e-96 355.5 196 89.3
SHI00391 Sapria himalayana HOM05D004989 ORTHO05D006335 5.0e-93 345.5 257 66.9
C03p10860 Brassica napus HOM05D004989 ORTHO05D006335 7.2e-92 341.7 360 55.3
HPP92_005588 Vanilla planifolia HOM05D004989 ORTHO05D006335 9.4e-92 341.3 294 63.3
Duzib151G0886 Durio zibethinus HOM05D004989 ORTHO05D006335 1.0e-90 337.8 366 54.6
ClCG05G005360 Citrullus lanatus HOM05D004989 ORTHO05D006335 2.3e-90 336.7 245 69.8
BcaB01g05294 Brassica carinata HOM05D004989 ORTHO05D006335 4.8e-88 328.9 371 52.8
PGR142G2933 Punica granatum HOM05D004989 ORTHO05D006335 1.1e-87 327.8 365 52.9
AagrBONN_evm.TU.Sc2ySwM_344.1251 Anthoceros agrestis HOM05D004989 ORTHO05D006335 2.6e-86 323.2 321 53.9
Pp3c8_1650 Physcomitrium patens HOM05D004989 ORTHO05D006335 5.2e-82 308.9 287 56.4
FAN07G2774 Fragaria x ananassa HOM05D004989 ORTHO05D006335 4.8e-80 302.4 268 60.4
TPR.G28611 Trifolium pratense HOM05D004989 ORTHO05D006739 1.7e-77 293.9 176 81.2
Hma1.2p1_2553F.1_g324320 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 2.2e-77 293.5 198 76.8
arahy.Tifrunner.gnm1.ann1.BS3LH0 Arachis hypogaea HOM05D004989 ORTHO05D006335 1.4e-74 284.3 370 47.8
Cre06.g250500 Chlamydomonas reinhardtii HOM05D004989 ORTHO05D006335 2.1e-67 260.4 336 40.8
arahy.Tifrunner.gnm1.ann1.J5ZRE9 Arachis hypogaea HOM05D004989 ORTHO05D006335 1.4e-66 257.7 188 68.1
Ca_00654_v3 Cicer arietinum L. HOM05D004989 ORTHO05D006335 3.0e-66 256.5 198 70.2
MCO05G313 Micromonas commoda HOM05D004989 ORTHO05D006335 2.2e-64 250.4 332 43.7
arahy.Tifrunner.gnm1.ann1.HR1U72 Arachis hypogaea HOM05D004989 ORTHO05D006335 1.1e-63 248.1 187 67.4
TPR.G30683 Trifolium pratense HOM05D004989 ORTHO05D006335 4.1e-63 246.1 164 75.6
Hma1.2p1_0995F.1_g245810 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 9.5e-60 235.0 177 71.8
SEGI_35556 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 6.1e-59 232.3 200 60.5
Cpa.g.sc147.7 Carica papaya HOM05D004989 ORTHO05D006335 1.3e-56 224.6 216 59.3
PRCOL_00001617 Prasinoderma coloniale HOM05D004989 ORTHO05D006335 1.6e-54 217.6 352 38.1
SEGI_27897 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 3.0e-50 203.4 123 76.4
SEGI_07547 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 6.8e-50 202.2 125 73.6
Cfa024379 Carpinus fangiana HOM05D004989 ORTHO05D006335 8.9e-50 201.8 289 38.8
Hund03167 Selenicereus undatus HOM05D004989 ORTHO05D006335 2.0e-49 200.7 121 76.9
Haze_26760 Corylus avellana HOM05D004980 ORTHO05D006505 3.2e-47 193.4 255 42.7
Atru.chr4.2545 Acer truncatum HOM05D004989 ORTHO05D006335 5.4e-47 192.6 159 64.2
Cre05.g234664 Chlamydomonas reinhardtii HOM05D004989 ORTHO05D006335 1.2e-43 181.4 353 34.3
SEGI_12399 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 2.5e-36 157.1 129 62.0
Atru.chr4.2547 Acer truncatum HOM05D004989 ORTHO05D000586 1.7e-32 144.4 117 62.4
Cfa015379 Carpinus fangiana HOM05D000407 ORTHO05D002981 1.3e-29 134.8 168 47.6
Actinidia08511 Actinidia chinensis HOM05D004989 ORTHO05D006335 1.1e-28 131.7 313 33.5
Cpa.g.sc147.6 Carica papaya HOM05D004989 ORTHO05D006335 3.4e-25 120.2 69 82.6
Cpa.g.sc147.5 Carica papaya HOM05D004989 ORTHO05D006335 1.3e-21 108.2 94 61.7
CBR_g19747 Chara braunii HOM05D000409 ORTHO05D000184 3.6e-19 100.1 87 57.5
TPR.G30666 Trifolium pratense HOM05D004989 ORTHO05D006335 8.1e-19 99.0 87 60.9
AUR62026378 Chenopodium quinoa HOM05D004989 ORTHO05D006335 7.1e-15 85.9 72 58.3
FAN07G1160 Fragaria x ananassa HOM05D004989 ORTHO05D006335 3.8e-08 63.5 44 70.5


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