Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G00280 Erythranthe guttata HOM05D003956 ORTHO05D004850 0.0e+00 1161.4 581 100.0
Migut.G00282 Erythranthe guttata HOM05D003956 ORTHO05D004850 0.0e+00 1160.2 581 99.8
Oeu032695.1 Olea europaea HOM05D003956 ORTHO05D004850 8.7e-310 1066.2 581 90.0
Sed0002405 Sechium edule HOM05D003956 ORTHO05D004850 2.5e-309 1064.7 581 89.0
Peaxi162Scf00095g00414 Petunia axillaris HOM05D003956 ORTHO05D004850 5.7e-309 1063.5 581 89.5
TAR365G1004 Trochodendron aralioides HOM05D003956 ORTHO05D004850 3.7e-308 1060.8 581 88.6
PGSC0003DMG400032107 Solanum tuberosum HOM05D003956 ORTHO05D004850 4.1e-307 1057.4 580 89.1
MELO3C006585.2 Cucumis melo HOM05D003956 ORTHO05D004850 6.9e-307 1056.6 581 88.6
Manes.03G188300 Manihot esculenta HOM05D003956 ORTHO05D004850 1.5e-306 1055.4 581 88.6
CSS0033563 Camellia sinensis var. sinensis HOM05D003956 ORTHO05D004850 2.0e-306 1055.0 581 89.2
Nitab4.5_0000059g0230 Nicotiana tabacum HOM05D003956 ORTHO05D004850 2.0e-306 1055.0 593 87.5
Dinv44455 Davidia involucrata HOM05D003956 ORTHO05D004850 3.4e-306 1054.3 581 88.3
Rhsim04G0213100 Rhododendron simsii HOM05D003956 ORTHO05D004850 3.4e-306 1054.3 581 88.6
Gorai.011G181800 Gossypium raimondii HOM05D003956 ORTHO05D004850 1.7e-305 1052.0 581 88.5
GSVIVG01017850001 Vitis vinifera HOM05D003956 ORTHO05D004850 2.2e-305 1051.6 581 88.0
Atru.chr4.2704 Acer truncatum HOM05D003956 ORTHO05D004850 2.9e-305 1051.2 581 88.1
Ciclev10006837m.g Citrus clementina HOM05D003956 ORTHO05D004850 2.9e-305 1051.2 590 87.8
Cfa015539 Carpinus fangiana HOM05D003956 ORTHO05D004850 6.5e-305 1050.0 581 88.6
Actinidia23451 Actinidia chinensis HOM05D003956 ORTHO05D004850 8.5e-305 1049.7 581 88.3
Sopen01g032260 Solanum pennellii HOM05D003956 ORTHO05D004850 8.5e-305 1049.7 581 88.8
Cc03_g02730 Coffea canephora HOM05D003956 ORTHO05D004850 1.4e-304 1048.9 582 88.0
PGR004G0287 Punica granatum HOM05D003956 ORTHO05D004850 1.4e-304 1048.9 581 88.1
Prupe.1G146600 Prunus persica HOM05D003956 ORTHO05D004850 1.9e-304 1048.5 581 87.1
Solyc01g080460.3 Solanum lycopersicum HOM05D003956 ORTHO05D004850 3.2e-304 1047.7 581 88.5
CsaV3_3G013930 Cucumis sativus L. HOM05D003956 ORTHO05D004850 4.2e-304 1047.3 581 88.0
CANSAT78G1736 Cannabis sativa HOM05D003956 ORTHO05D004850 7.2e-304 1046.6 581 87.6
Eucgr.H03642 Eucalyptus grandis HOM05D003956 ORTHO05D004850 7.2e-304 1046.6 580 87.8
SGA_v2.0_scaffold142G35643 Striga asiatica HOM05D003956 ORTHO05D004850 9.4e-304 1046.2 581 89.7
TWI09G0935 Tripterygium wilfordii HOM05D003956 ORTHO05D004850 9.4e-304 1046.2 581 88.0
Gohir.D10G162900 Gossypium hirsutum HOM05D003956 ORTHO05D004850 1.2e-303 1045.8 581 88.1
ECA240G3955 Erigeron canadensis HOM05D003956 ORTHO05D004850 3.6e-303 1044.3 581 87.4
CiPaw.01G156600 Carya illinoinensis HOM05D003956 ORTHO05D004850 4.6e-303 1043.9 581 87.1
Nitab4.5_0010477g0010 Nicotiana tabacum HOM05D003956 ORTHO05D004850 4.6e-303 1043.9 608 84.9
Potri.010G027800 Populus trichocarpa HOM05D003956 ORTHO05D004850 7.9e-303 1043.1 581 87.4
Actinidia40209 Actinidia chinensis HOM05D003956 ORTHO05D004850 1.4e-302 1042.3 581 87.6
CAN.G889.10 Capsicum annuum HOM05D003956 ORTHO05D004850 1.4e-302 1042.3 581 88.0
QL06p006231 Quercus lobata HOM05D003956 ORTHO05D004850 1.4e-302 1042.3 592 86.0
RcHm_v2.0_Chr4g0420131 Rosa chinensis HOM05D003956 ORTHO05D004850 5.1e-302 1040.4 581 86.1
Duzib212G0153 Durio zibethinus HOM05D003956 ORTHO05D004850 6.7e-302 1040.0 581 87.1
Duzib151G0049 Durio zibethinus HOM05D003956 ORTHO05D004850 1.5e-301 1038.9 581 87.3
MD13G1177500 Malus domestica HOM05D003956 ORTHO05D004850 2.6e-301 1038.1 610 84.1
Nn3g21184 Nelumbo nucifera HOM05D003956 ORTHO05D004850 4.4e-301 1037.3 581 86.4
Aqoxy2G03183 Aquilegia oxysepala HOM05D003956 ORTHO05D004850 1.3e-300 1035.8 581 87.1
FvH4_4g16670 Fragaria vesca HOM05D003956 ORTHO05D004850 1.7e-300 1035.4 580 86.0
FAN12G0499 Fragaria x ananassa HOM05D003956 ORTHO05D004850 1.7e-300 1035.4 580 86.0
FAN12G2270 Fragaria x ananassa HOM05D003956 ORTHO05D004850 1.7e-300 1035.4 580 86.0
Haze_01011 Corylus avellana HOM05D003956 ORTHO05D004850 2.2e-300 1035.0 581 87.4
FAN17G1489 Fragaria x ananassa HOM05D003956 ORTHO05D004850 4.8e-300 1033.9 580 86.0
FAN07G1911 Fragaria x ananassa HOM05D003956 ORTHO05D004850 2.4e-299 1031.6 580 85.9
Lsat_1_v5_gn_5_51481 Lactuca sativa HOM05D003956 ORTHO05D004850 5.3e-299 1030.4 580 87.2
MD13G1177400 Malus domestica HOM05D003956 ORTHO05D004850 5.3e-299 1030.4 581 86.4
Hma1.2p1_0511F.1_g169230 Hydrangea macrophylla HOM05D003956 ORTHO05D004850 6.9e-299 1030.0 580 86.9
Psat0ss7919g0200 Pisum sativum HOM05D003956 ORTHO05D004850 6.9e-299 1030.0 581 85.9
Nn4g26122 Nelumbo nucifera HOM05D003956 ORTHO05D004850 1.2e-298 1029.2 581 86.7
FAN22G1243 Fragaria x ananassa HOM05D003956 ORTHO05D004850 2.0e-298 1028.5 580 85.7
Glyma.07G253700 Glycine max HOM05D003956 ORTHO05D004850 2.6e-298 1028.1 581 86.7
MD16G1179500 Malus domestica HOM05D003956 ORTHO05D004850 1.0e-297 1026.2 581 86.4
TPR.G28132 Trifolium pratense HOM05D003956 ORTHO05D004850 1.0e-297 1026.2 581 85.7
unitig_749.g14056 Utricularia gibba HOM05D003956 ORTHO05D004850 1.7e-297 1025.4 581 87.1
Glyma.17G020600 Glycine max HOM05D003956 ORTHO05D004850 2.2e-297 1025.0 581 86.6
Lj4g0014830 Lotus japonicus HOM05D003956 ORTHO05D004850 2.2e-297 1025.0 581 85.5
Ca_21564_v3 Cicer arietinum L. HOM05D003956 ORTHO05D004850 3.2e-296 1021.1 578 85.6
VMungo1215G0684 Vigna mungo HOM05D003956 ORTHO05D004850 3.2e-296 1021.1 581 85.7
PSO302G0065 Papaver somniferum HOM05D003956 ORTHO05D004850 7.2e-296 1020.0 581 84.3
MSTRG.10031 Avicennia marina HOM05D003956 ORTHO05D004850 1.2e-295 1019.2 581 85.4
SalBow2G1708 Salvia bowleyana HOM05D003956 ORTHO05D004850 1.2e-295 1019.2 581 87.1
PSO170G3340 Papaver somniferum HOM05D003956 ORTHO05D004850 2.1e-295 1018.5 581 84.3
Aa31LG9G1910 Aethionema arabicum HOM05D003956 ORTHO05D004850 2.7e-295 1018.1 579 85.1
MD16G1179300 Malus domestica HOM05D003956 ORTHO05D004850 2.7e-295 1018.1 580 85.9
Phvul.003G098200 Phaseolus vulgaris HOM05D003956 ORTHO05D004850 3.6e-295 1017.7 581 85.4
Lalb_Chr13g0303991 Lupinus albus HOM05D003956 ORTHO05D004850 1.8e-294 1015.4 581 85.2
Sc25g0004550 Simmondsia chinensis HOM05D003956 ORTHO05D004850 1.8e-294 1015.4 581 84.5
MD16G1179400 Malus domestica HOM05D003956 ORTHO05D004850 1.5e-293 1012.3 580 85.2
Sabra10G0012900 Salix brachista HOM05D003956 ORTHO05D004850 2.6e-293 1011.5 581 85.4
ATR0626G228 Amborella trichopoda HOM05D003956 ORTHO05D004850 5.7e-293 1010.4 580 84.1
Hund20662 Selenicereus undatus HOM05D003956 ORTHO05D004850 5.7e-293 1010.4 581 84.7
THA.LOC104820228 Tarenaya hassleriana HOM05D003956 ORTHO05D004850 7.4e-293 1010.0 581 83.8
CDE08G0632 Ceratophyllum demersum HOM05D003956 ORTHO05D004850 1.3e-292 1009.2 581 83.5
MSTRG.10030 Avicennia marina HOM05D003956 ORTHO05D004850 1.7e-292 1008.8 581 84.2
QL06p005921 Quercus lobata HOM05D003956 ORTHO05D004850 6.3e-292 1006.9 580 84.5
Cpa.g.sc16.74 Carica papaya HOM05D003956 ORTHO05D004850 1.4e-291 1005.7 581 83.8
Sp7g13780 Schrenkiella parvula HOM05D003956 ORTHO05D004850 7.0e-291 1003.4 581 83.8
arahy.Tifrunner.gnm1.ann1.YQ8C5N Arachis hypogaea HOM05D003956 ORTHO05D004850 1.6e-290 1002.3 580 84.8
Actinidia32373 Actinidia chinensis HOM05D003956 ORTHO05D004850 5.0e-289 997.3 581 83.1
Hund19586 Selenicereus undatus HOM05D003956 ORTHO05D004850 2.5e-288 995.0 581 82.6
arahy.Tifrunner.gnm1.ann1.EQKV61 Arachis hypogaea HOM05D003956 ORTHO05D004850 7.2e-288 993.4 596 82.6
Thhalv10024330m.g Eutrema salsugineum HOM05D003956 ORTHO05D004850 1.6e-287 992.3 581 83.5
Lj3C806G12 Lonicera japonica HOM05D003956 ORTHO05D004850 3.0e-286 988.0 583 83.7
vmacro08238 Vaccinium macrocarpon HOM05D003956 ORTHO05D004850 5.2e-286 987.3 694 72.8
AT4G15530 Arabidopsis thaliana HOM05D003956 ORTHO05D004850 6.7e-286 986.9 580 82.9
AL7G39990 Arabidopsis lyrata HOM05D003956 ORTHO05D004850 1.2e-285 986.1 581 82.8
ClCG05G005590 Citrullus lanatus HOM05D003956 ORTHO05D004850 1.2e-285 986.1 570 85.3
CARHR222330 Cardamine hirsuta HOM05D003956 ORTHO05D004850 2.0e-285 985.3 581 82.8
Carub.0007s2635 Capsella rubella HOM05D003956 ORTHO05D004850 7.5e-285 983.4 581 82.4
BcaNung00266 Brassica carinata HOM05D003956 ORTHO05D004850 1.3e-284 982.6 580 82.4
C01p27430 Brassica napus HOM05D003956 ORTHO05D004850 1.3e-284 982.6 580 82.2
A01p22040 Brassica napus HOM05D003956 ORTHO05D004850 1.7e-284 982.2 580 82.2
BraA01t02110Z Brassica rapa HOM05D003956 ORTHO05D004850 1.7e-284 982.2 580 82.2
BcaC09g50248 Brassica carinata HOM05D003956 ORTHO05D004850 1.8e-283 978.8 580 82.1
Zm00001eb287770 Zea mays HOM05D003956 ORTHO05D004850 1.8e-283 978.8 581 81.4
BraA03t14011Z Brassica rapa HOM05D003956 ORTHO05D004850 3.1e-283 978.0 581 81.6
C07p47210 Brassica napus HOM05D003956 ORTHO05D004850 5.3e-283 977.2 581 81.8
Os05g0405000 Oryza sativa ssp. japonica HOM05D003956 ORTHO05D004850 5.3e-283 977.2 581 80.9
BolC7t45243H Brassica oleracea HOM05D003956 ORTHO05D004850 9.1e-283 976.5 581 81.6
BcaC06g32940 Brassica carinata HOM05D003956 ORTHO05D004850 1.2e-282 976.1 581 81.4
CDE02G0811 Ceratophyllum demersum HOM05D003956 ORTHO05D004850 1.2e-282 976.1 598 79.9
Zm00001eb349810 Zea mays HOM05D003956 ORTHO05D004850 1.2e-282 976.1 581 81.2
Rhsim02G0016700 Rhododendron simsii HOM05D003956 ORTHO05D004850 1.3e-281 972.6 570 83.2
BolC1t02682H Brassica oleracea HOM05D003956 ORTHO05D004850 2.2e-281 971.8 587 81.1
DCAR_023283 Daucus carota HOM05D003956 ORTHO05D004850 1.1e-280 969.5 581 82.6
Duzib151G0209 Durio zibethinus HOM05D003956 ORTHO05D004850 1.9e-280 968.8 581 81.1
Thecc.04G272800 Theobroma cacao HOM05D003956 ORTHO05D004850 2.7e-279 964.9 581 80.9
vmacro15287 Vaccinium macrocarpon HOM05D003956 ORTHO05D004850 3.6e-279 964.5 610 78.5
Thecc.04G272600 Theobroma cacao HOM05D003956 ORTHO05D004850 6.1e-279 963.8 540 87.0
AagrBONN_evm.TU.Sc2ySwM_228.3276 Anthoceros agrestis HOM05D003956 ORTHO05D004850 2.3e-278 961.8 580 79.8
BcaC09g50243 Brassica carinata HOM05D003956 ORTHO05D004850 4.0e-278 961.1 586 80.4
arahy.Tifrunner.gnm1.ann1.I3NY02 Arachis hypogaea HOM05D003956 ORTHO05D004850 5.2e-278 960.7 580 80.9
A03p49170 Brassica napus HOM05D003956 ORTHO05D004850 2.6e-277 958.4 567 81.3
Mapoly0009s0124 Marchantia polymorpha HOM05D003956 ORTHO05D004850 6.3e-276 953.7 580 79.8
PGR031G3666 Punica granatum HOM05D003956 ORTHO05D004850 4.5e-274 947.6 581 78.7
SMO351G0542 Selaginella moellendorffii HOM05D003956 ORTHO05D004850 1.5e-272 942.6 577 78.7
Pp3c5_22540 Physcomitrium patens HOM05D003956 ORTHO05D004850 8.0e-271 936.8 577 78.9
CSS0018237 Camellia sinensis var. sinensis HOM05D003956 ORTHO05D004850 1.5e-269 932.6 582 79.9
Eucgr.B01186 Eucalyptus grandis HOM05D003956 ORTHO05D004850 9.8e-269 929.9 560 79.5
unitig_26.g8936 Utricularia gibba HOM05D003956 ORTHO05D004850 2.7e-266 921.8 581 80.9
Ah.11g043140 Amaranthus hybridus HOM05D003956 ORTHO05D004850 7.3e-264 913.7 566 79.9
EL10Ac1g01820 Beta vulgaris HOM05D003956 ORTHO05D004850 3.6e-263 911.4 581 78.8
CSS0013368 Camellia sinensis var. sinensis HOM05D003956 ORTHO05D004850 3.0e-257 891.7 511 84.3
arahy.Tifrunner.gnm1.ann1.DC6B04 Arachis hypogaea HOM05D003956 ORTHO05D004850 5.4e-251 870.9 580 74.5
Psat4g028880 Pisum sativum HOM05D003956 ORTHO05D004850 6.0e-250 867.5 511 81.4
MCO12G211 Micromonas commoda HOM05D003956 ORTHO05D004850 2.1e-234 815.8 580 68.8
Cre17.g734548 Chlamydomonas reinhardtii HOM05D003956 ORTHO05D004850 1.7e-228 796.2 581 67.5
Hma1.2p1_2025F.1_g311530 Hydrangea macrophylla HOM05D003956 ORTHO05D004850 2.9e-228 795.4 588 70.6
Gohir.A10G105700 Gossypium hirsutum HOM05D003956 ORTHO05D004850 2.7e-218 762.3 423 86.8
AUR62035456 Chenopodium quinoa HOM05D003956 ORTHO05D004850 1.5e-213 746.5 505 75.6
TPR.G28133 Trifolium pratense HOM05D003956 ORTHO05D004850 3.2e-203 712.2 577 63.8
Cre10.g424750 Chlamydomonas reinhardtii HOM05D003956 ORTHO05D004850 7.6e-197 691.0 590 59.8
AUR62034949 Chenopodium quinoa HOM05D003956 ORTHO05D004850 1.3e-191 673.7 451 75.8
SGA_v2.0_scaffold86G26866 Striga asiatica HOM05D003956 ORTHO05D004850 1.3e-172 610.5 466 71.0
MCO01G687 Micromonas commoda HOM05D003956 ORTHO05D004850 4.2e-171 605.5 601 54.6
BcaC06g33414 Brassica carinata HOM05D003956 ORTHO05D004850 1.2e-162 577.4 338 84.3
SGA_v2.0_scaffold86G26865 Striga asiatica HOM05D003956 ORTHO05D004850 4.0e-145 519.2 391 69.6
Medtr4g118355 Medicago truncatula HOM05D003956 ORTHO05D004850 2.3e-140 503.4 296 83.8
Medtr4g118350 Medicago truncatula HOM05D003956 ORTHO05D004850 1.1e-121 441.4 256 80.9
AUR62034328 Chenopodium quinoa HOM05D003956 ORTHO05D004850 2.6e-112 410.2 423 53.7
arahy.Tifrunner.gnm1.ann1.9WT78J Arachis hypogaea HOM05D003956 ORTHO05D004850 2.4e-102 377.1 321 63.6
arahy.Tifrunner.gnm1.ann1.HZTZ4X Arachis hypogaea HOM05D003956 ORTHO05D004850 2.6e-88 330.5 264 65.5
CBR_g50184 Chara braunii HOM05D003956 ORTHO05D004850 1.9e-83 314.3 384 46.4
arahy.Tifrunner.gnm1.ann1.7LSJ4G Arachis hypogaea HOM05D003956 ORTHO05D004850 4.8e-66 256.5 227 61.7
AUR62034950 Chenopodium quinoa HOM05D003956 ORTHO05D004850 4.1e-65 253.4 158 77.8
AUR62035455 Chenopodium quinoa HOM05D003956 ORTHO05D004850 4.2e-62 243.4 134 85.8
arahy.Tifrunner.gnm1.ann1.989M5Y Arachis hypogaea HOM05D003956 ORTHO05D004850 9.4e-62 242.3 216 59.3
AagrBONN_evm.TU.Sc2ySwM_362.937 Anthoceros agrestis HOM05D003956 ORTHO05D004850 3.5e-48 197.2 119 77.3
arahy.Tifrunner.gnm1.ann1.S9XVUY Arachis hypogaea HOM05D003956 ORTHO05D004850 1.8e-41 174.9 268 41.4
HanXRQChr03g0080571 Helianthus annuus HOM05D003956 ORTHO05D004850 1.6e-37 161.8 108 71.3
HanXRQChr16g0518081 Helianthus annuus HOM05D003956 ORTHO05D004850 7.5e-35 152.9 89 78.7
Lsat_1_v5_gn_2_81921 Lactuca sativa HOM05D005278 ORTHO05D006500 1.9e-30 138.3 88 73.9
arahy.Tifrunner.gnm1.ann1.LGH8AH Arachis hypogaea HOM05D003956 ORTHO05D004850 2.8e-29 134.4 83 77.1
Pp3s196_40 Physcomitrium patens HOM05D003956 ORTHO05D044360 7.0e-25 119.8 431 28.3
arahy.Tifrunner.gnm1.ann1.G5444S Arachis hypogaea HOM05D003956 ORTHO05D004850 2.3e-23 114.8 95 64.2
TPR.G26738 Trifolium pratense HOM05D003956 ORTHO05D000576 6.4e-18 96.7 56 73.2
TPR.G35464 Trifolium pratense HOM05D003956 ORTHO05D004850 9.2e-17 92.8 60 70.0
MBI15_g32557_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 1.5e-11 75.5 60 65.0
arahy.Tifrunner.gnm1.ann1.57CL3B Arachis hypogaea HOM05D003956 ORTHO05D004850 4.4e-11 73.9 51 70.6
arahy.Tifrunner.gnm1.ann1.V4Y3U4 Arachis hypogaea HOM05D003956 ORTHO05D004850 5.8e-11 73.6 49 73.5
SGA_v2.0_scaffold86G26869 Striga asiatica HOM05D000924 ORTHO05D001209 4.9e-10 70.5 46 73.9
arahy.Tifrunner.gnm1.ann1.GGZS5I Arachis hypogaea HOM05D003956 ORTHO05D004850 2.7e-08 64.7 43 72.1


User provided reference genes

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