Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G00270 Erythranthe guttata HOM05D006719 ORTHO05D007063 1.4e-35 152.9 112 100.0
Peaxi162Scf00534g00017 Petunia axillaris HOM05D006719 ORTHO05D007063 1.8e-17 92.8 112 51.8
CSS0008404 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 5.2e-17 91.3 110 76.4
CSS0019267 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 5.2e-17 91.3 110 76.4
Cfa015380 Carpinus fangiana HOM05D006719 ORTHO05D007063 7.5e-16 87.4 93 53.8
MSTRG.21797 Avicennia marina HOM05D006719 ORTHO05D007063 1.3e-15 86.7 97 78.4
Potri.008G207500 Populus trichocarpa HOM05D006719 ORTHO05D007063 6.3e-15 84.3 105 73.3
DCAR_030531 Daucus carota HOM05D006719 ORTHO05D007063 1.8e-14 82.8 107 72.9
Ciclev10006148m.g Citrus clementina HOM05D006719 ORTHO05D007063 7.0e-14 80.9 92 82.6
Duzib151G0940 Durio zibethinus HOM05D006719 ORTHO05D007063 7.0e-14 80.9 97 78.4
Gorai.006G263400 Gossypium raimondii HOM05D006719 ORTHO05D007063 7.0e-14 80.9 104 76.9
VMungo1309G0351 Vigna mungo HOM05D006719 ORTHO05D007063 7.0e-14 80.9 87 86.2
THA.LOC104821772 Tarenaya hassleriana HOM05D006719 ORTHO05D007063 1.6e-13 79.7 94 77.7
Prupe.1G137900 Prunus persica HOM05D006719 ORTHO05D007063 2.7e-13 79.0 104 72.1
MD13G1169300 Malus domestica HOM05D006719 ORTHO05D007063 1.7e-12 76.3 93 79.6
BcaC07g37932 Brassica carinata HOM05D006719 ORTHO05D007063 1.9e-11 72.8 93 47.3
BolC8t48317H Brassica oleracea HOM05D006719 ORTHO05D007063 1.9e-11 72.8 93 47.3
Dinv29768 Davidia involucrata HOM05D001303 ORTHO05D001129 1.9e-11 72.8 107 70.1
SGA_v2.0_scaffold147G36286 Striga asiatica HOM05D006719 ORTHO05D007063 1.9e-11 72.8 82 76.8
Gohir.A09G239500 Gossypium hirsutum HOM05D006719 ORTHO05D007063 2.5e-11 72.4 82 85.4
CiPaw.01G149100 Carya illinoinensis HOM05D006719 ORTHO05D007063 4.2e-11 71.6 84 53.6
Solyc01g066900.4 Solanum lycopersicum HOM05D006719 ORTHO05D007063 4.2e-11 71.6 112 69.6
vmacro08144 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 4.2e-11 71.6 111 67.6
vmacro22972 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 4.2e-11 71.6 111 67.6
Duzib212G0625 Durio zibethinus HOM05D006719 ORTHO05D007063 5.5e-11 71.2 87 81.6
COL.COLO4_13881 Corchorus olitorius HOM05D006719 ORTHO05D007063 7.2e-11 70.9 97 75.3
FAN07G2874 Fragaria x ananassa HOM05D006719 ORTHO05D007063 7.2e-11 70.9 98 44.9
FAN17G0015 Fragaria x ananassa HOM05D006719 ORTHO05D007063 9.4e-11 70.5 98 43.9
Psat1g153440 Pisum sativum HOM05D006719 ORTHO05D007063 9.4e-11 70.5 100 72.0
Potri.010G024600 Populus trichocarpa HOM05D006719 ORTHO05D007063 9.4e-11 70.5 106 67.9
BraA08t33189Z Brassica rapa HOM05D006719 ORTHO05D007063 1.2e-10 70.1 93 75.3
unitig_37.g12394 Utricularia gibba HOM05D006719 ORTHO05D007063 1.6e-10 69.7 110 67.3
Dinv44385 Davidia involucrata HOM05D006719 ORTHO05D007063 2.1e-10 69.3 110 67.3
ECA233G1326 Erigeron canadensis HOM05D006719 ORTHO05D007063 2.7e-10 68.9 93 74.2
Sabra10G0014400 Salix brachista HOM05D006719 ORTHO05D007063 2.7e-10 68.9 117 41.0
Thecc.04G284000 Theobroma cacao HOM05D006719 ORTHO05D007063 2.7e-10 68.9 97 74.2
MD16G1170500 Malus domestica HOM05D006719 ORTHO05D007063 3.6e-10 68.6 93 76.3
Manes.03G194500 Manihot esculenta HOM05D006719 ORTHO05D007063 3.6e-10 68.6 97 71.1
Gorai.011G189600 Gossypium raimondii HOM05D006719 ORTHO05D007063 4.7e-10 68.2 104 69.2
Hma1.2p1_2670F.1_g326650 Hydrangea macrophylla HOM05D006719 ORTHO05D007063 4.7e-10 68.2 110 66.4
Zm00001eb137600 Zea mays HOM05D006719 ORTHO05D007063 4.7e-10 68.2 108 56.5
Gohir.D10G170100 Gossypium hirsutum HOM05D006719 ORTHO05D007063 6.1e-10 67.8 104 69.2
SalBow2G1281 Salvia bowleyana HOM05D006719 ORTHO05D007063 1.4e-09 66.6 39 84.6
HPP92_017216 Vanilla planifolia HOM05D006719 ORTHO05D007063 1.4e-09 66.6 107 48.6
Gohir.D09G240400 Gossypium hirsutum HOM05D006719 ORTHO05D007063 1.8e-09 66.2 82 82.9
Peaxi162Scf00024g00041 Petunia axillaris HOM05D006719 ORTHO05D007063 3.0e-09 65.5 95 72.6
Gohir.A10G163700 Gossypium hirsutum HOM05D006719 ORTHO05D007063 5.2e-09 64.7 104 67.3
MBI18_g14088_MAGBIO Magnolia biondii HOM05D000713 ORTHO05D000547 1.5e-08 63.2 91 42.9
Carub.0007s2587 Capsella rubella HOM05D006719 ORTHO05D007063 2.0e-08 62.8 101 67.3
Sopen01g028510 Solanum pennellii HOM05D006719 ORTHO05D007063 2.0e-08 62.8 112 66.1
Actinidia40259 Actinidia chinensis HOM05D006719 ORTHO05D007063 2.6e-08 62.4 110 66.4
Oeu037752.1 Olea europaea HOM05D006719 ORTHO05D007063 2.6e-08 62.4 95 72.6
HanXRQChr08g0227651 Helianthus annuus HOM05D006719 ORTHO05D007063 3.4e-08 62.0 93 72.0
AUR62040366 Chenopodium quinoa HOM05D006719 ORTHO05D007063 5.7e-08 61.2 123 38.2
PSO170G6252 Papaver somniferum HOM05D006719 ORTHO05D007063 5.7e-08 61.2 95 71.6
Peaxi162Scf00024g00231 Petunia axillaris HOM05D006719 ORTHO05D007063 5.7e-08 61.2 95 70.5
A08p11980 Brassica napus HOM05D006719 ORTHO05D007063 7.5e-08 60.8 41 73.2
MBI19_g42338_MAGBIO Magnolia biondii HOM05D006719 ORTHO05D007063 7.5e-08 60.8 117 58.1
Atru.chr4.2828 Acer truncatum HOM05D006719 ORTHO05D007063 1.3e-07 60.1 92 72.8
Ca_01942_v3 Cicer arietinum L. HOM05D006719 ORTHO05D007063 2.2e-07 59.3 95 70.5
Lj6g0006694 Lotus japonicus HOM05D006719 ORTHO05D007063 4.8e-07 58.2 95 70.5
Duzib052G0445 Durio zibethinus HOM05D006719 ORTHO05D007063 1.1e-06 57.0 96 68.8
Thhalv10026485m.g Eutrema salsugineum HOM05D006719 ORTHO05D007063 1.4e-06 56.6 93 69.9
RcHm_v2.0_Chr4g0422101 Rosa chinensis HOM05D006719 ORTHO05D007063 1.4e-06 56.6 90 68.9
THA.LOC104820261 Tarenaya hassleriana HOM05D006719 ORTHO05D007063 1.8e-06 56.2 94 69.1
CARHR290290 Cardamine hirsuta HOM05D006719 ORTHO05D007063 2.4e-06 55.8 108 63.0
Phvul.009G247500 Phaseolus vulgaris HOM05D006719 ORTHO05D007063 3.1e-06 55.5 87 75.9
FAN12G0931 Fragaria x ananassa HOM05D006719 ORTHO05D007063 7.0e-06 54.3 90 68.9


User provided reference genes

Program Settings