Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G00182 Erythranthe guttata HOM05D006881 ORTHO05D008423 1.3e-71 273.1 153 100.0
MSTRG.10082 Avicennia marina HOM05D006881 ORTHO05D008423 1.8e-49 199.5 157 77.1
SGA_v2.0_scaffold86G26903 Striga asiatica HOM05D006881 ORTHO05D008423 1.9e-46 189.5 157 75.2
SalBow2G0124 Salvia bowleyana HOM05D006881 ORTHO05D008423 9.4e-46 187.2 157 75.2
SalBow2G2956 Salvia bowleyana HOM05D006881 ORTHO05D008423 8.8e-44 180.6 118 78.8
Oeu021111.1 Olea europaea HOM05D006881 ORTHO05D008423 3.1e-41 172.2 162 70.4
unitig_748.g8741 Utricularia gibba HOM05D006881 ORTHO05D008423 2.7e-40 169.1 118 70.3
PGSC0003DMG400010658 Solanum tuberosum HOM05D006881 ORTHO05D008423 7.7e-40 167.5 155 67.1
Sopen01g029530 Solanum pennellii HOM05D006881 ORTHO05D008423 1.0e-39 167.2 155 67.7
Cc03_g02070 Coffea canephora HOM05D006881 ORTHO05D008423 5.0e-39 164.9 151 71.5
Solyc01g067580.4 Solanum lycopersicum HOM05D006881 ORTHO05D008423 1.9e-38 162.9 154 66.2
CAN.G223.19 Capsicum annuum HOM05D006881 ORTHO05D008423 2.8e-37 159.1 118 67.8
vmacro15245 Vaccinium macrocarpon HOM05D006881 ORTHO05D008423 1.8e-36 156.4 154 61.0
Dinv38306 Davidia involucrata HOM05D006881 ORTHO05D008423 6.8e-36 154.5 103 75.7
Sabra08G0154800 Salix brachista HOM05D006881 ORTHO05D008423 6.8e-36 154.5 155 63.2
CARHR194480 Cardamine hirsuta HOM05D006881 ORTHO05D008423 2.0e-35 152.9 160 63.8
Aa31LG11G11080 Aethionema arabicum HOM05D006881 ORTHO05D008423 2.6e-35 152.5 159 63.5
BcaB05g23335 Brassica carinata HOM05D006881 ORTHO05D008423 3.4e-35 152.1 161 64.6
Peaxi162Scf00386g00414 Petunia axillaris HOM05D006881 ORTHO05D008423 5.7e-35 151.4 103 74.8
Potri.008G216700 Populus trichocarpa HOM05D006881 ORTHO05D008423 5.7e-35 151.4 155 63.2
BcaC03g13606 Brassica carinata HOM05D006881 ORTHO05D008423 7.5e-35 151.0 161 64.0
C02p10000 Brassica napus HOM05D006881 ORTHO05D008423 7.5e-35 151.0 161 64.0
AL6G29810 Arabidopsis lyrata HOM05D006881 ORTHO05D008423 1.7e-34 149.8 158 65.2
AT5G18540 Arabidopsis thaliana HOM05D006881 ORTHO05D008423 1.7e-34 149.8 162 63.0
Carub.0006s1681 Capsella rubella HOM05D006881 ORTHO05D008423 1.7e-34 149.8 158 63.9
Thhalv10014829m.g Eutrema salsugineum HOM05D006881 ORTHO05D008423 4.9e-34 148.3 161 61.5
Lsat_1_v5_gn_3_24181 Lactuca sativa HOM05D006881 ORTHO05D008423 6.4e-34 147.9 112 70.5
CSS0005297 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 8.3e-34 147.5 162 63.0
CSS0009612 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 8.3e-34 147.5 158 62.7
GSVIVG01017769001 Vitis vinifera HOM05D006881 ORTHO05D008423 8.3e-34 147.5 157 64.3
Manes.03G192600 Manihot esculenta HOM05D006881 ORTHO05D008423 1.8e-33 146.4 148 63.5
Actinidia00041 Actinidia chinensis HOM05D006881 ORTHO05D008423 2.4e-33 146.0 158 53.8
Psat1g151960 Pisum sativum HOM05D006881 ORTHO05D008423 2.4e-33 146.0 148 62.8
Cpa.g.sc16.153 Carica papaya HOM05D006881 ORTHO05D008423 3.2e-33 145.6 103 69.9
Sp6g25790 Schrenkiella parvula HOM05D006881 ORTHO05D008423 4.1e-33 145.2 158 61.4
EL10Ac3g06585 Beta vulgaris HOM05D006881 ORTHO05D008423 5.4e-33 144.8 120 62.5
TAR636G2672 Trochodendron aralioides HOM05D006881 ORTHO05D008423 7.0e-33 144.4 103 68.0
HanXRQChr17g0536111 Helianthus annuus HOM05D006881 ORTHO05D008423 9.2e-33 144.1 104 73.1
ECA246G4172 Erigeron canadensis HOM05D006881 ORTHO05D008423 1.6e-32 143.3 108 71.3
A02p04970 Brassica napus HOM05D006881 ORTHO05D008423 2.0e-32 142.9 109 68.8
PSO210G1559 Papaver somniferum HOM05D006881 ORTHO05D008423 2.7e-32 142.5 109 65.1
Prupe.1G139200 Prunus persica HOM05D006881 ORTHO05D008423 3.5e-32 142.1 120 62.5
DCAR_024558 Daucus carota HOM05D006881 ORTHO05D008423 5.9e-32 141.4 120 64.2
PSO170G5464 Papaver somniferum HOM05D006881 ORTHO05D008423 5.9e-32 141.4 111 64.0
BraA02t05456Z Brassica rapa HOM05D006881 ORTHO05D008423 7.8e-32 141.0 105 70.5
Duzib212G0198 Durio zibethinus HOM05D006881 ORTHO05D008423 7.8e-32 141.0 159 59.7
TPR.G23710 Trifolium pratense HOM05D006881 ORTHO05D008423 7.8e-32 141.0 110 63.6
Nitab4.5_0013689g0020 Nicotiana tabacum HOM05D006881 ORTHO05D008423 1.3e-31 140.2 155 63.2
Ca_02413_v3 Cicer arietinum L. HOM05D002802 ORTHO05D003166 3.0e-31 139.0 110 62.7
Eucgr.B01283 Eucalyptus grandis HOM05D006881 ORTHO05D008423 5.0e-31 138.3 115 66.1
MBI19_g24002_MAGBIO Magnolia biondii HOM05D006881 ORTHO05D008423 5.0e-31 138.3 110 64.5
MD13G1170800 Malus domestica HOM05D006881 ORTHO05D008423 1.1e-30 137.1 119 65.5
THA.LOC104818851 Tarenaya hassleriana HOM05D006881 ORTHO05D008423 1.1e-30 137.1 120 62.5
arahy.Tifrunner.gnm1.ann1.E8HU74 Arachis hypogaea HOM05D006881 ORTHO05D008423 1.9e-30 136.3 102 67.6
Ciclev10005896m.g Citrus clementina HOM05D006881 ORTHO05D008423 1.9e-30 136.3 160 61.2
CiPaw.01G150600 Carya illinoinensis HOM05D006881 ORTHO05D008423 2.5e-30 136.0 119 58.8
Lalb_Chr18g0051811 Lupinus albus HOM05D006881 ORTHO05D008423 2.5e-30 136.0 110 60.9
Phvul.009G245900 Phaseolus vulgaris HOM05D006881 ORTHO05D008423 4.3e-30 135.2 109 64.2
Thecc.04G282000 Theobroma cacao HOM05D006881 ORTHO05D008423 4.3e-30 135.2 115 63.5
CANSAT78G0809 Cannabis sativa HOM05D006881 ORTHO05D008423 5.6e-30 134.8 152 61.8
Hund20570 Selenicereus undatus HOM05D006881 ORTHO05D008423 7.3e-30 134.4 123 61.0
FvH4_4g17670 Fragaria vesca HOM05D006881 ORTHO05D008423 9.5e-30 134.0 105 69.5
FAN12G2006 Fragaria x ananassa HOM05D006881 ORTHO05D008423 9.5e-30 134.0 105 69.5
FAN12G2996 Fragaria x ananassa HOM05D006881 ORTHO05D008423 9.5e-30 134.0 105 69.5
FAN17G1543 Fragaria x ananassa HOM05D006881 ORTHO05D008423 1.2e-29 133.7 105 69.5
QL06p008283 Quercus lobata HOM05D006881 ORTHO05D008423 1.2e-29 133.7 105 67.6
Aqoxy2G03052 Aquilegia oxysepala HOM05D006881 ORTHO05D008423 2.1e-29 132.9 110 64.5
ClCG05G005980 Citrullus lanatus HOM05D006881 ORTHO05D008423 2.8e-29 132.5 119 59.7
FAN07G1171 Fragaria x ananassa HOM05D006881 ORTHO05D008423 3.6e-29 132.1 105 68.6
Zm00001eb330210 Zea mays HOM05D006881 ORTHO05D008423 4.7e-29 131.7 117 59.0
Glyma.09G046900 Glycine max HOM05D006881 ORTHO05D008423 8.0e-29 131.0 101 66.3
BolC2t06902H Brassica oleracea HOM05D006881 ORTHO05D008423 1.4e-28 130.2 102 69.6
Gohir.A02G048200 Gossypium hirsutum HOM05D006881 ORTHO05D008423 1.4e-28 130.2 157 58.6
RcHm_v2.0_Chr4g0421611 Rosa chinensis HOM05D006881 ORTHO05D008423 2.3e-28 129.4 105 65.7
A10p21020 Brassica napus HOM05D006881 ORTHO05D008423 3.1e-28 129.0 165 57.0
VMungo1309G2079 Vigna mungo HOM05D006881 ORTHO05D008423 3.1e-28 129.0 101 66.3
Gohir.D02G053300 Gossypium hirsutum HOM05D006881 ORTHO05D008423 4.0e-28 128.6 157 59.2
Sed0007304 Sechium edule HOM05D006881 ORTHO05D008423 4.0e-28 128.6 155 58.1
TWI09G1277 Tripterygium wilfordii HOM05D006881 ORTHO05D008423 4.0e-28 128.6 110 62.7
Medtr2g437470 Medicago truncatula HOM05D006881 ORTHO05D008423 6.8e-28 127.9 101 64.4
Glyma.15G154400 Glycine max HOM05D006881 ORTHO05D008423 1.2e-27 127.1 101 65.3
Os07g0669600 Oryza sativa ssp. japonica HOM05D006881 ORTHO05D008423 1.2e-27 127.1 100 64.0
Atru.chr4.2800 Acer truncatum HOM05D006881 ORTHO05D008423 1.5e-27 126.7 106 65.1
Gorai.005G059100 Gossypium raimondii HOM05D006881 ORTHO05D008423 1.5e-27 126.7 114 60.5
PGR031G0133 Punica granatum HOM05D006881 ORTHO05D008423 3.4e-27 125.6 169 57.4
Lj6g0021421 Lotus japonicus HOM05D006881 ORTHO05D008423 5.8e-27 124.8 102 64.7
BraA10t44166Z Brassica rapa HOM05D006881 ORTHO05D008423 2.2e-26 122.9 167 57.5
arahy.Tifrunner.gnm1.ann1.NXX1KJ Arachis hypogaea HOM05D006881 ORTHO05D008423 2.9e-26 122.5 121 56.2
CsaV3_3G014430 Cucumis sativus L. HOM05D006881 ORTHO05D008423 4.9e-26 121.7 158 56.3
Hma1.2p1_0698F.1_g205340 Hydrangea macrophylla HOM05D006881 ORTHO05D008423 2.4e-25 119.4 82 73.2
MELO3C006643.2 Cucumis melo HOM05D006881 ORTHO05D008423 7.0e-25 117.9 154 55.8
Rhsim02G0011900 Rhododendron simsii HOM05D006881 ORTHO05D008423 7.0e-25 117.9 84 71.4
Nn3g21363 Nelumbo nucifera HOM05D006881 ORTHO05D008423 9.2e-25 117.5 81 70.4
Sc19g0005040 Simmondsia chinensis HOM05D006881 ORTHO05D008423 2.0e-24 116.3 122 55.7
HPP92_025214 Vanilla planifolia HOM05D006881 ORTHO05D008423 2.7e-24 115.9 100 60.0
HPP92_025226 Vanilla planifolia HOM05D006881 ORTHO05D008423 2.7e-24 115.9 100 60.0
Ah.13g074590 Amaranthus hybridus HOM05D006881 ORTHO05D008423 7.8e-24 114.4 118 57.6
CDE09G1155 Ceratophyllum demersum HOM05D006881 ORTHO05D008423 1.0e-23 114.0 101 62.4
CSS0034417 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 1.3e-23 113.6 87 66.7
ATR0706G047 Amborella trichopoda HOM05D006881 ORTHO05D008423 3.3e-22 109.0 108 52.8
SHI00284 Sapria himalayana HOM05D006881 ORTHO05D008423 7.3e-22 107.8 87 65.5
Mapoly0010s0048 Marchantia polymorpha HOM05D006881 ORTHO05D008423 1.4e-20 103.6 115 49.6
SMO367G0816 Selaginella moellendorffii HOM05D006881 ORTHO05D008423 1.4e-20 103.6 106 56.6
SEGI_11441 Sequoiadendron giganteum HOM05D006881 ORTHO05D008423 1.4e-20 103.6 114 50.9
CSS0015929 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 1.7e-18 96.7 168 48.8
TWI73G0635 Tripterygium wilfordii HOM05D006881 ORTHO05D008423 4.9e-18 95.1 81 61.7
Haze_01236 Corylus avellana HOM05D006881 ORTHO05D008423 8.3e-18 94.4 81 61.7
Pp3c15_10020 Physcomitrium patens HOM05D006881 ORTHO05D008423 9.2e-17 90.9 112 48.2
BcaC04g18670 Brassica carinata HOM05D006881 ORTHO05D008423 1.3e-15 87.0 64 68.8
AUR62040384 Chenopodium quinoa HOM05D006881 ORTHO05D008423 2.5e-14 82.8 53 75.5
AagrBONN_evm.TU.Sc2ySwM_228.1971 Anthoceros agrestis HOM05D006881 ORTHO05D008423 4.3e-14 82.0 99 47.5
BcaB08g36664 Brassica carinata HOM05D006881 ORTHO05D008423 9.5e-14 80.9 104 59.6
CDE02G3907 Ceratophyllum demersum HOM05D006881 ORTHO05D008423 9.5e-14 80.9 76 61.8
CSS0002463 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 6.2e-13 78.2 105 43.8
C09p57950 Brassica napus HOM05D006881 ORTHO05D008423 8.9e-12 74.3 103 45.6
BolC9t58662H Brassica oleracea HOM05D006881 ORTHO05D008423 8.9e-12 74.3 103 45.6
CBR_g46646 Chara braunii HOM05D006881 ORTHO05D008423 3.4e-11 72.4 93 45.2
Nitab4.5_0000784g0080 Nicotiana tabacum HOM05D006881 ORTHO05D008423 2.3e-07 59.7 156 42.3


User provided reference genes

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