Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G00164 Erythranthe guttata HOM05D003821 ORTHO05D004449 3.4e-40 167.9 88 100.0
MSTRG.3917 Avicennia marina HOM05D003821 ORTHO05D004449 2.2e-31 138.7 88 84.1
Oeu027727.1 Olea europaea HOM05D003821 ORTHO05D004449 8.4e-31 136.7 87 80.5
MSTRG.24794 Avicennia marina HOM05D003821 ORTHO05D004449 1.6e-29 132.5 87 79.3
Hma1.2p1_0078F.1_g040550 Hydrangea macrophylla HOM05D003821 ORTHO05D004449 1.8e-28 129.0 86 79.1
Oeu026313.1 Olea europaea HOM05D003821 ORTHO05D004449 1.8e-28 129.0 87 78.2
Nitab4.5_0000191g0110 Nicotiana tabacum HOM05D003821 ORTHO05D004449 1.1e-27 126.3 113 65.5
Rhsim02G0009100 Rhododendron simsii HOM05D003821 ORTHO05D004449 1.9e-27 125.6 101 70.3
Manes.15G012400 Manihot esculenta HOM05D003821 ORTHO05D004449 3.3e-27 124.8 87 77.0
TWI09G0102 Tripterygium wilfordii HOM05D003821 ORTHO05D004449 7.4e-27 123.6 86 75.6
CiPaw.08G097300 Carya illinoinensis HOM05D003821 ORTHO05D004449 2.8e-26 121.7 86 74.4
Phvul.009G247900 Phaseolus vulgaris HOM05D003821 ORTHO05D004449 4.8e-26 120.9 74 82.4
TWI53G1984 Tripterygium wilfordii HOM05D003821 ORTHO05D004449 8.2e-26 120.2 86 73.3
CiPaw.07G106400 Carya illinoinensis HOM05D003821 ORTHO05D004449 6.9e-25 117.1 78 76.9
Ca_10352_v3 Cicer arietinum L. HOM05D003821 ORTHO05D004449 9.0e-25 116.7 86 70.9
AL7G39490 Arabidopsis lyrata HOM05D003821 ORTHO05D004449 1.5e-24 115.9 73 79.5
AT4G15802 Arabidopsis thaliana HOM05D003821 ORTHO05D004449 1.5e-24 115.9 73 79.5
Psat3g022560 Pisum sativum HOM05D003821 ORTHO05D004449 1.5e-24 115.9 76 77.6
Carub.0007s2585 Capsella rubella HOM05D003821 ORTHO05D004449 4.5e-24 114.4 71 81.7
CARHR290310 Cardamine hirsuta HOM05D003821 ORTHO05D004449 5.8e-24 114.0 72 79.2
Thecc.04G284600 Theobroma cacao HOM05D003821 ORTHO05D004449 4.9e-23 110.9 86 70.9
Haze_04896 Corylus avellana HOM05D003821 ORTHO05D004449 1.9e-22 109.0 91 65.9
Sed0001615 Sechium edule HOM05D003821 ORTHO05D004449 3.2e-22 108.2 99 64.6
CAN.G185.14 Capsicum annuum HOM05D003821 ORTHO05D004449 4.2e-22 107.8 86 68.6
SGA_v2.0_scaffold147G36288 Striga asiatica HOM05D003821 ORTHO05D004449 1.2e-21 106.3 88 68.2
SGA_v2.0_scaffold91G27999 Striga asiatica HOM05D003821 ORTHO05D004449 1.2e-21 106.3 113 58.4
Atru.chr4.2835 Acer truncatum HOM05D003821 ORTHO05D004449 1.3e-20 102.8 134 49.3
CANSAT78G0465 Cannabis sativa HOM05D003821 ORTHO05D004449 1.8e-20 102.4 78 69.2
QL10p053326 Quercus lobata HOM05D003821 ORTHO05D004449 2.3e-20 102.1 93 61.3
QL10p054532 Quercus lobata HOM05D003821 ORTHO05D004449 2.3e-20 102.1 93 61.3
Medtr1g088760 Medicago truncatula HOM05D003821 ORTHO05D004449 3.9e-20 101.3 114 52.6
PGSC0003DMG400022856 Solanum tuberosum HOM05D003821 ORTHO05D004449 8.7e-20 100.1 115 54.8
SGA_v2.0_scaffold428G51522 Striga asiatica HOM05D003821 ORTHO05D004449 8.7e-20 100.1 87 65.5
Ciclev10007067m.g Citrus clementina HOM05D003821 ORTHO05D004449 1.1e-19 99.8 128 49.2
Gorai.004G142200 Gossypium raimondii HOM05D003821 ORTHO05D004449 1.1e-19 99.8 127 48.8
BraA08t33190Z Brassica rapa HOM05D003821 ORTHO05D004449 1.5e-19 99.4 105 58.1
Nn4g25849 Nelumbo nucifera HOM05D003821 ORTHO05D004449 1.5e-19 99.4 86 61.6
Os06g0274000 Oryza sativa ssp. japonica HOM05D003821 ORTHO05D004449 3.3e-19 98.2 75 72.0
TPR.G9594 Trifolium pratense HOM05D003821 ORTHO05D004449 3.3e-19 98.2 114 52.6
vmacro08148 Vaccinium macrocarpon HOM05D003821 ORTHO05D004449 4.3e-19 97.8 150 44.0
BcaB04g18333 Brassica carinata HOM05D003821 ORTHO05D004449 7.4e-19 97.1 77 68.8
BraA01t02079Z Brassica rapa HOM05D000802 ORTHO05D013138 9.7e-19 96.7 98 61.2
Gohir.D08G138600 Gossypium hirsutum HOM05D003821 ORTHO05D004449 1.3e-18 96.3 87 60.9
BolC7t45268H Brassica oleracea HOM05D003821 ORTHO05D004449 1.6e-18 95.9 77 68.8
BraA03t14035Z Brassica rapa HOM05D003821 ORTHO05D004449 1.6e-18 95.9 76 69.7
FvH4_4g18020 Fragaria vesca HOM05D003821 ORTHO05D004449 1.6e-18 95.9 87 60.9
Nitab4.5_0000570g0120 Nicotiana tabacum HOM05D003821 ORTHO05D004449 2.2e-18 95.5 86 61.6
TPR.G33980 Trifolium pratense HOM05D003821 ORTHO05D004449 2.2e-18 95.5 104 55.8
Peaxi162Scf00048g00209 Petunia axillaris HOM05D003821 ORTHO05D004449 6.3e-18 94.0 81 67.9
COL.COLO4_13871 Corchorus olitorius HOM05D003821 ORTHO05D004449 1.1e-17 93.2 95 56.8
RcHm_v2.0_Chr6g0293541 Rosa chinensis HOM05D003821 ORTHO05D004449 1.1e-17 93.2 107 52.3
FAN12G1096 Fragaria x ananassa HOM05D003821 ORTHO05D004449 1.8e-17 92.4 87 60.9
TWI79G0264 Tripterygium wilfordii HOM05D003821 ORTHO05D004449 1.8e-17 92.4 72 68.1
Nitab4.5_0003546g0070 Nicotiana tabacum HOM05D003821 ORTHO05D004449 4.1e-17 91.3 106 54.7
Haze_01204 Corylus avellana HOM05D003821 ORTHO05D004449 5.3e-17 90.9 104 53.8
CSS0027872 Camellia sinensis var. sinensis HOM05D003821 ORTHO05D004449 2.0e-16 89.0 98 57.1
Nitab4.5_0004438g0100 Nicotiana tabacum HOM05D003821 ORTHO05D004449 2.0e-16 89.0 95 53.7
FAN07G0841 Fragaria x ananassa HOM05D003821 ORTHO05D004449 3.4e-16 88.2 88 60.2
Actinidia32231 Actinidia chinensis HOM05D003821 ORTHO05D004449 5.9e-16 87.4 85 60.0
VMungo1309G1076 Vigna mungo HOM05D003821 ORTHO05D004449 7.7e-16 87.0 80 60.0
Gohir.A08G117600 Gossypium hirsutum HOM05D003821 ORTHO05D004449 1.0e-15 86.7 87 56.3
Cpa.g.sc9.208 Carica papaya HOM05D003821 ORTHO05D004449 1.3e-15 86.3 92 56.5
Zm00001eb380410 Zea mays HOM05D003821 ORTHO05D004449 1.3e-15 86.3 72 66.7
A03p49340 Brassica napus HOM05D003821 ORTHO05D004449 3.8e-15 84.7 77 61.0
AUR62008616 Chenopodium quinoa HOM05D003821 ORTHO05D004449 3.8e-15 84.7 87 57.5
FAN15G2810 Fragaria x ananassa HOM05D003821 ORTHO05D004449 6.5e-15 84.0 86 57.0
FAN24G2279 Fragaria x ananassa HOM05D003821 ORTHO05D004449 6.5e-15 84.0 86 57.0
Gohir.A10G164000 Gossypium hirsutum HOM05D003821 ORTHO05D004449 6.5e-15 84.0 67 68.7
vmacro15236 Vaccinium macrocarpon HOM05D003821 ORTHO05D004449 6.5e-15 84.0 107 51.4
AUR62033168 Chenopodium quinoa HOM05D003821 ORTHO05D004449 8.5e-15 83.6 87 56.3
ATR0580G132 Amborella trichopoda HOM05D003821 ORTHO05D004449 1.4e-14 82.8 94 56.4
FAN27G2508 Fragaria x ananassa HOM05D003821 ORTHO05D004449 1.4e-14 82.8 86 53.5
Gorai.007G237400 Gossypium raimondii HOM05D003821 ORTHO05D004449 1.4e-14 82.8 82 59.8
SalBow2G1159 Salvia bowleyana HOM05D003821 ORTHO05D004449 1.4e-14 82.8 103 55.3
Ah.04g153550 Amaranthus hybridus HOM05D003821 ORTHO05D004449 2.5e-14 82.0 88 58.0
Migut.N00088 Erythranthe guttata HOM05D003821 ORTHO05D004449 3.2e-14 81.6 88 53.4
A01p21700 Brassica napus HOM05D000802 ORTHO05D013138 4.2e-14 81.3 82 59.8
arahy.Tifrunner.gnm1.ann1.UD53LE Arachis hypogaea HOM05D003821 ORTHO05D004449 7.2e-14 80.5 73 64.4
BcaC06g33446 Brassica carinata HOM05D003821 ORTHO05D004449 7.2e-14 80.5 73 63.0
ClCG09G006050 Citrullus lanatus HOM05D003821 ORTHO05D004449 9.4e-14 80.1 86 54.7
FvH4_2g25350 Fragaria vesca HOM05D003821 ORTHO05D004449 9.4e-14 80.1 86 52.3
FAN17G0959 Fragaria x ananassa HOM05D003821 ORTHO05D004449 1.2e-13 79.7 83 57.8
FAN20G2567 Fragaria x ananassa HOM05D000897 ORTHO05D000716 1.2e-13 79.7 85 55.3
Potri.014G131701 Populus trichocarpa HOM05D003821 ORTHO05D004449 1.2e-13 79.7 84 54.8
EL10Ac7g17441 Beta vulgaris HOM05D003821 ORTHO05D004449 1.6e-13 79.3 107 47.7
Gohir.D11G223400 Gossypium hirsutum HOM05D003821 ORTHO05D004449 1.6e-13 79.3 62 71.0
BcaC06g32965 Brassica carinata HOM05D003821 ORTHO05D004449 2.7e-13 78.6 73 60.3
Prupe.1G136900 Prunus persica HOM05D003821 ORTHO05D004449 2.7e-13 78.6 87 54.0
PGR031G0623 Punica granatum HOM05D003821 ORTHO05D004449 2.7e-13 78.6 85 57.6
Sc24g0003850 Simmondsia chinensis HOM05D000714 ORTHO05D000544 2.7e-13 78.6 85 55.3
BcaNung00244 Brassica carinata HOM05D000802 ORTHO05D013138 3.6e-13 78.2 72 62.5
DCAR_002813 Daucus carota HOM05D003821 ORTHO05D004449 3.6e-13 78.2 79 57.0
THA.LOC104820264 Tarenaya hassleriana HOM05D003821 ORTHO05D004449 3.6e-13 78.2 83 55.4
unitig_748.g8733 Utricularia gibba HOM05D003821 ORTHO05D004449 6.1e-13 77.4 87 54.0
arahy.Tifrunner.gnm1.ann1.LH51N9 Arachis hypogaea HOM05D003821 ORTHO05D004449 1.8e-12 75.9 84 54.8
DCAR_013986 Daucus carota HOM05D003821 ORTHO05D004449 2.3e-12 75.5 99 49.5
Potri.010G025000 Populus trichocarpa HOM05D003821 ORTHO05D004449 2.3e-12 75.5 87 51.7
BcaC07g37933 Brassica carinata HOM05D003821 ORTHO05D004449 3.0e-12 75.1 88 54.5
A08p11990 Brassica napus HOM05D003821 ORTHO05D004449 3.0e-12 75.1 88 51.1
Rhsim04G0221500 Rhododendron simsii HOM05D003821 ORTHO05D004449 5.1e-12 74.3 142 38.7
Sabra10G0014100 Salix brachista HOM05D003821 ORTHO05D004449 5.1e-12 74.3 174 35.6
Manes.05G064201 Manihot esculenta HOM05D003821 ORTHO05D004449 6.7e-12 73.9 60 68.3
Mapoly0039s0070 Marchantia polymorpha HOM05D003821 ORTHO05D004449 8.8e-12 73.6 74 55.4
Manes.03G194900 Manihot esculenta HOM05D003821 ORTHO05D004449 2.5e-11 72.0 79 51.9
C01p27060 Brassica napus HOM05D003821 ORTHO05D004449 5.7e-11 70.9 41 85.4
CANSAT25G1361 Cannabis sativa HOM05D003821 ORTHO05D004449 5.7e-11 70.9 71 52.1
Sp7g14190 Schrenkiella parvula HOM05D003821 ORTHO05D004449 5.7e-11 70.9 41 85.4
PSO832G3070 Papaver somniferum HOM05D003821 ORTHO05D004449 9.7e-11 70.1 81 49.4
Potri.008G208100 Populus trichocarpa HOM05D003821 ORTHO05D004449 9.7e-11 70.1 87 48.3
CAN.G484.32 Capsicum annuum HOM05D003821 ORTHO05D004449 1.7e-10 69.3 130 43.8
MELO3C016019.2 Cucumis melo HOM05D003821 ORTHO05D004449 2.2e-10 68.9 45 77.8
RcHm_v2.0_Chr4g0422231 Rosa chinensis HOM05D003821 ORTHO05D004449 2.2e-10 68.9 41 80.5
Cc03_g01940 Coffea canephora HOM05D003821 ORTHO05D004449 2.8e-10 68.6 41 85.4
C07p47410 Brassica napus HOM05D003821 ORTHO05D004449 4.8e-10 67.8 107 43.0
Ciclev10023083m.g Citrus clementina HOM05D003821 ORTHO05D004449 4.8e-10 67.8 86 47.7
BolC8t48318H Brassica oleracea HOM05D003821 ORTHO05D004449 6.3e-10 67.4 87 50.6
Sabra08G0153500 Salix brachista HOM05D003821 ORTHO05D004449 8.2e-10 67.0 127 40.2
Lalb_Chr15g0078581 Lupinus albus HOM05D003821 ORTHO05D004449 1.1e-09 66.6 41 78.0
MD11G1304500 Malus domestica HOM05D003821 ORTHO05D004449 1.1e-09 66.6 41 78.0
Pp3c16_4400 Physcomitrium patens HOM05D003821 ORTHO05D004449 1.4e-09 66.2 89 50.6
Hund05412 Selenicereus undatus HOM05D003821 ORTHO05D004449 1.4e-09 66.2 41 78.0
Cre07.g329800 Chlamydomonas reinhardtii HOM05D003821 ORTHO05D004449 1.8e-09 65.9 76 50.0
Duzib138G0767 Durio zibethinus HOM05D003821 ORTHO05D004449 1.8e-09 65.9 88 45.5
TAR362G0968 Trochodendron aralioides HOM05D003821 ORTHO05D004449 1.8e-09 65.9 85 47.1
Lalb_Chr18g0047131 Lupinus albus HOM05D003821 ORTHO05D004449 2.4e-09 65.5 41 78.0
PSO210G2740 Papaver somniferum HOM05D003821 ORTHO05D004449 3.1e-09 65.1 81 46.9
Nn3g21436 Nelumbo nucifera HOM05D000763 ORTHO05D000599 4.1e-09 64.7 41 75.6
GSVIVG01017758001 Vitis vinifera HOM05D003821 ORTHO05D004449 4.1e-09 64.7 41 78.0
Medtr7g108615 Medicago truncatula HOM05D003821 ORTHO05D004449 5.3e-09 64.3 41 75.6
Psat6g166600 Pisum sativum HOM05D003821 ORTHO05D004449 5.3e-09 64.3 86 47.7
Zm00001eb098770 Zea mays HOM05D003821 ORTHO05D004449 5.3e-09 64.3 81 46.9
Lj5g0023739 Lotus japonicus HOM05D003821 ORTHO05D004449 6.9e-09 63.9 82 48.8
Gohir.D01G051650 Gossypium hirsutum HOM05D003821 ORTHO05D004449 9.1e-09 63.5 41 75.6
Gohir.D08G087850 Gossypium hirsutum HOM05D003821 ORTHO05D004449 9.1e-09 63.5 41 75.6
Gorai.002G124200 Gossypium raimondii HOM05D003821 ORTHO05D004449 9.1e-09 63.5 41 75.6
Peaxi162Scf00086g00435 Petunia axillaris HOM05D003821 ORTHO05D004449 1.2e-08 63.2 34 88.2
Thecc.01G297100 Theobroma cacao HOM05D003821 ORTHO05D004449 1.2e-08 63.2 86 44.2
TAR365G0642 Trochodendron aralioides HOM05D003821 ORTHO05D004449 1.2e-08 63.2 86 46.5
Gohir.D08G106266 Gossypium hirsutum HOM05D003821 ORTHO05D004449 1.5e-08 62.8 40 77.5
THA.LOC104817510 Tarenaya hassleriana HOM05D003821 ORTHO05D004449 1.5e-08 62.8 86 44.2
RcHm_v2.0_Chr4g0422221 Rosa chinensis HOM05D003821 ORTHO05D004449 2.0e-08 62.4 43 74.4
Lj4g0002252 Lotus japonicus HOM05D003821 ORTHO05D004449 2.6e-08 62.0 40 77.5
Aa31LG10G6300 Aethionema arabicum HOM05D003821 ORTHO05D004449 3.4e-08 61.6 111 38.7
Prupe.8G258100 Prunus persica HOM05D003821 ORTHO05D004449 4.5e-08 61.2 86 44.2
CsaV3_7G029090 Cucumis sativus L. HOM05D003821 ORTHO05D004449 7.7e-08 60.5 75 49.3
Duzib133G0834 Durio zibethinus HOM05D003821 ORTHO05D004449 7.7e-08 60.5 85 47.1
Manes.01G217100 Manihot esculenta HOM05D003821 ORTHO05D004449 7.7e-08 60.5 71 50.7
Hund20554 Selenicereus undatus HOM05D003821 ORTHO05D004449 7.7e-08 60.5 117 40.2
PGR004G1635 Punica granatum HOM05D003821 ORTHO05D004449 1.0e-07 60.1 84 48.8
CSS0020997 Camellia sinensis var. sinensis HOM05D003821 ORTHO05D004449 1.3e-07 59.7 40 80.0
CSS0044842 Camellia sinensis var. sinensis HOM05D003821 ORTHO05D004449 1.3e-07 59.7 40 80.0
CSS0048427 Camellia sinensis var. sinensis HOM05D003821 ORTHO05D004449 1.3e-07 59.7 40 80.0
MD03G1285000 Malus domestica HOM05D003821 ORTHO05D004449 1.3e-07 59.7 48 66.7
SHI29056 Sapria himalayana HOM05D000030 ORTHO05D000009 1.3e-07 59.7 79 48.1
THA.LOC104802574 Tarenaya hassleriana HOM05D003821 ORTHO05D004449 1.3e-07 59.7 83 45.8
Gorai.N022500 Gossypium raimondii HOM05D003821 ORTHO05D004449 2.2e-07 58.9 41 75.6
Atru.chr5.1182 Acer truncatum HOM05D003821 ORTHO05D004449 5.0e-07 57.8 86 41.9
Aa31LG8G3720 Aethionema arabicum HOM05D003821 ORTHO05D004449 5.0e-07 57.8 73 46.6
Gorai.005G060300 Gossypium raimondii HOM05D003821 ORTHO05D004449 5.0e-07 57.8 41 70.7
TWI14G0562 Tripterygium wilfordii HOM05D003821 ORTHO05D004449 5.0e-07 57.8 87 46.0
Glyma.10G019600 Glycine max HOM05D003821 ORTHO05D004449 6.5e-07 57.4 76 46.1
HanXRQChr06g0169061 Helianthus annuus HOM05D003821 ORTHO05D004449 6.5e-07 57.4 41 68.3
THA.LOC104821775 Tarenaya hassleriana HOM05D003821 ORTHO05D004449 6.5e-07 57.4 72 47.2
Hma1.2p1_0209F.1_g088610 Hydrangea macrophylla HOM05D003821 ORTHO05D004449 8.5e-07 57.0 44 65.9
Ah.08g213210 Amaranthus hybridus HOM05D003821 ORTHO05D004449 1.4e-06 56.2 46 63.0
Gohir.A12G010600 Gossypium hirsutum HOM05D003821 ORTHO05D004449 1.4e-06 56.2 86 43.0
Gohir.D12G011000 Gossypium hirsutum HOM05D003821 ORTHO05D004449 1.4e-06 56.2 86 44.2
MBI02_g32313_MAGBIO Magnolia biondii HOM05D036700 ORTHO05D048553 1.4e-06 56.2 45 68.9
unitig_32.g10644 Utricularia gibba HOM05D003821 ORTHO05D004449 1.4e-06 56.2 35 77.1
Glyma.03G213100 Glycine max HOM05D003821 ORTHO05D004449 1.9e-06 55.8 49 57.1
Medtr7g108610 Medicago truncatula HOM05D003821 ORTHO05D004449 1.9e-06 55.8 38 71.1
Glyma.02G154700 Glycine max HOM05D003821 ORTHO05D004449 4.2e-06 54.7 76 44.7
Gorai.008G011000 Gossypium raimondii HOM05D003821 ORTHO05D004449 5.5e-06 54.3 85 43.5
PRCOL_00003111 Prasinoderma coloniale HOM05D003821 ORTHO05D004449 5.5e-06 54.3 58 51.7
MELO3C032813.2 Cucumis melo HOM05D003821 ORTHO05D004449 9.4e-06 53.5 34 76.5


User provided reference genes

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