Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G00097 Erythranthe guttata HOM05D002444 ORTHO05D009235 1.5e-122 444.5 421 100.0
MSTRG.3868 Avicennia marina HOM05D002444 ORTHO05D009235 4.2e-64 250.4 426 59.2
SGA_v2.0_scaffold18G08390 Striga asiatica HOM05D002444 ORTHO05D009235 6.3e-60 236.5 423 57.0
SalBow8G2135 Salvia bowleyana HOM05D002444 ORTHO05D009235 6.6e-57 226.5 421 57.5
Oeu019954.2 Olea europaea HOM05D002444 ORTHO05D009235 1.5e-48 198.7 431 51.7
Rhsim04G0232800 Rhododendron simsii HOM05D002444 ORTHO05D009235 2.3e-41 174.9 426 50.9
CSS0000232 Camellia sinensis var. sinensis HOM05D002444 ORTHO05D009235 3.9e-41 174.1 433 50.6
Lj6C687T6 Lonicera japonica HOM05D002444 ORTHO05D009235 1.5e-40 172.2 434 51.8
Dinv44313 Davidia involucrata HOM05D002444 ORTHO05D009235 3.6e-39 167.5 188 48.4
QL02p088731 Quercus lobata HOM05D002444 ORTHO05D009235 3.4e-37 161.0 426 49.5
Hma1.2p1_0078F.1_g040150 Hydrangea macrophylla HOM05D002444 ORTHO05D009235 5.8e-37 160.2 434 46.3
Actinidia40353 Actinidia chinensis HOM05D002444 ORTHO05D009235 1.7e-36 158.7 188 44.1
Haze_01077 Corylus avellana HOM05D002444 ORTHO05D009235 4.9e-36 157.1 433 48.3
vmacro08072 Vaccinium macrocarpon HOM05D002444 ORTHO05D009235 1.9e-35 155.2 182 45.6
Cpa.g.sc9.92 Carica papaya HOM05D002444 ORTHO05D009235 7.1e-35 153.3 420 42.6
Thecc.04G296100 Theobroma cacao HOM05D002444 ORTHO05D009235 3.0e-33 147.9 421 49.2
CiPaw.02G076500 Carya illinoinensis HOM05D002444 ORTHO05D009235 1.9e-32 145.2 188 44.7
Sabra08G0082100 Salix brachista HOM05D002444 ORTHO05D009235 1.2e-31 142.5 435 43.4
Cc03_g01100 Coffea canephora HOM05D002444 ORTHO05D009235 1.6e-31 142.1 179 44.7
Duzib151G0185 Durio zibethinus HOM05D002444 ORTHO05D009235 1.6e-31 142.1 421 43.7
Potri.008G108300 Populus trichocarpa HOM05D002444 ORTHO05D009235 2.8e-31 141.4 435 42.3
TAR374G0260 Trochodendron aralioides HOM05D002444 ORTHO05D009235 2.8e-31 141.4 194 40.7
Prupe.1G002300 Prunus persica HOM05D002444 ORTHO05D009235 3.6e-31 141.0 191 44.5
AUR62042953 Chenopodium quinoa HOM05D002444 ORTHO05D009235 1.1e-30 139.4 428 42.8
Nitab4.5_0000169g0070 Nicotiana tabacum HOM05D002444 ORTHO05D009235 2.4e-30 138.3 176 43.2
Gohir.A09G064700 Gossypium hirsutum HOM05D002444 ORTHO05D009235 3.1e-30 137.9 421 44.7
PGSC0003DMG401007553 Solanum tuberosum HOM05D002444 ORTHO05D009235 1.2e-29 136.0 183 42.6
CAN.G197.15 Capsicum annuum HOM05D002444 ORTHO05D009235 2.0e-29 135.2 428 42.8
DCAR_023334 Daucus carota HOM05D002444 ORTHO05D009235 4.4e-29 134.0 189 43.4
Sopen01g026450 Solanum pennellii HOM05D002444 ORTHO05D009235 4.4e-29 134.0 183 43.2
Sp3g15130 Schrenkiella parvula HOM05D002444 ORTHO05D009235 5.8e-29 133.7 359 46.5
TWI73G0446 Tripterygium wilfordii HOM05D002444 ORTHO05D009235 7.6e-29 133.3 185 42.7
Nitab4.5_0005333g0010 Nicotiana tabacum HOM05D002444 ORTHO05D009235 9.9e-29 132.9 176 42.6
unitig_748.g7794 Utricularia gibba HOM05D002444 ORTHO05D009235 1.3e-28 132.5 178 43.8
EL10Ac3g04919 Beta vulgaris HOM05D002444 ORTHO05D009235 1.7e-28 132.1 421 46.3
Thhalv10022362m.g Eutrema salsugineum HOM05D002444 ORTHO05D009235 2.2e-28 131.7 359 47.4
MD00G1073300 Malus domestica HOM05D002444 ORTHO05D009235 3.8e-28 131.0 153 45.1
RcHm_v2.0_Chr7g0221991 Rosa chinensis HOM05D002444 ORTHO05D009235 3.8e-28 131.0 179 41.3
Nn3g21650 Nelumbo nucifera HOM05D002444 ORTHO05D009235 6.4e-28 130.2 189 39.7
Aa31LG8G3960 Aethionema arabicum HOM05D002444 ORTHO05D009235 8.4e-28 129.8 359 47.1
COL.COLO4_34661 Corchorus olitorius HOM05D001121 ORTHO05D009235 8.4e-28 129.8 177 41.8
Carub.0003s1662 Capsella rubella HOM05D002444 ORTHO05D009235 1.4e-27 129.0 358 46.9
Gorai.006G078600 Gossypium raimondii HOM05D002444 ORTHO05D009235 2.4e-27 128.3 176 42.0
Lsat_1_v5_gn_6_19160 Lactuca sativa HOM05D002444 ORTHO05D009235 5.4e-27 127.1 178 42.7
Sc13g0006330 Simmondsia chinensis HOM05D002444 ORTHO05D009235 1.6e-26 125.6 425 46.8
AL3G29860 Arabidopsis lyrata HOM05D002444 ORTHO05D009235 4.6e-26 124.0 359 45.4
COL.COLO4_29076 Corchorus olitorius HOM05D002444 ORTHO05D009235 6.0e-26 123.6 110 53.6
CsaV3_3G015050 Cucumis sativus L. HOM05D002444 ORTHO05D009235 6.0e-26 123.6 446 44.6
FAN13G1854 Fragaria x ananassa HOM05D002444 ORTHO05D009235 6.0e-26 123.6 177 44.6
FvH4_5g29230 Fragaria vesca HOM05D002444 ORTHO05D009235 1.7e-25 122.1 177 44.1
AUR62016141 Chenopodium quinoa HOM05D002444 ORTHO05D009235 3.0e-25 121.3 185 38.9
MELO3C006701.2 Cucumis melo HOM05D002444 ORTHO05D009235 5.1e-25 120.6 192 40.6
FAN18G1273 Fragaria x ananassa HOM05D002444 ORTHO05D009235 5.1e-25 120.6 177 43.5
THA.LOC104821798 Tarenaya hassleriana HOM05D002444 ORTHO05D009235 6.6e-25 120.2 346 44.8
Sed0015924 Sechium edule HOM05D002444 ORTHO05D009235 2.5e-24 118.2 177 40.1
A01p37370 Brassica napus HOM05D002444 ORTHO05D009235 4.3e-24 117.5 360 29.7
BraA01t03795Z Brassica rapa HOM05D002444 ORTHO05D009235 4.3e-24 117.5 360 29.7
COL.COLO4_36843 Corchorus olitorius HOM05D002444 ORTHO05D009235 9.6e-24 116.3 107 51.4
Manes.03G202100 Manihot esculenta HOM05D002444 ORTHO05D009235 1.6e-23 115.5 368 43.2
MBI06_g47069_MAGBIO Magnolia biondii HOM05D002444 ORTHO05D009235 4.8e-23 114.0 191 38.2
PGR142G0401 Punica granatum HOM05D002444 ORTHO05D009235 6.2e-23 113.6 115 51.3
SHI00166 Sapria himalayana HOM05D002444 ORTHO05D009235 6.2e-23 113.6 123 44.7
C01p47300 Brassica napus HOM05D002444 ORTHO05D009235 1.1e-22 112.8 360 29.7
FAN04G0068 Fragaria x ananassa HOM05D002444 ORTHO05D009235 1.8e-22 112.1 174 42.5
BolC1t04700H Brassica oleracea HOM05D002444 ORTHO05D009235 3.1e-22 111.3 360 29.4
Ah.04g154860 Amaranthus hybridus HOM05D002444 ORTHO05D009235 9.0e-22 109.8 99 51.5
BcaC09g48647 Brassica carinata HOM05D002444 ORTHO05D009235 1.5e-21 109.0 112 45.5
arahy.Tifrunner.gnm1.ann1.9AMP7R Arachis hypogaea HOM05D002444 ORTHO05D009235 1.7e-20 105.5 104 49.0
CANSAT01G1305 Cannabis sativa HOM05D002444 ORTHO05D009235 2.9e-20 104.8 345 38.6
arahy.Tifrunner.gnm1.ann1.48GXQL Arachis hypogaea HOM05D002444 ORTHO05D009235 4.2e-19 100.9 104 48.1
Lj4g0020012 Lotus japonicus HOM05D002444 ORTHO05D009235 7.1e-19 100.1 155 40.6
Lalb_Chr05g0229111 Lupinus albus HOM05D002444 ORTHO05D009235 7.1e-19 100.1 146 40.4
Glyma.08G268300 Glycine max HOM05D002444 ORTHO05D009235 9.3e-19 99.8 366 42.6
TAR365G0161 Trochodendron aralioides HOM05D002444 ORTHO05D009235 2.1e-18 98.6 162 37.0
TPR.G24811 Trifolium pratense HOM05D002444 ORTHO05D009235 5.1e-17 94.0 384 41.9
CARHR092170 Cardamine hirsuta HOM05D002444 ORTHO05D009235 2.8e-15 88.2 309 47.9
Medtr8g070060 Medicago truncatula HOM05D002444 ORTHO05D009235 8.1e-15 86.7 137 35.0
Lj6C687T3 Lonicera japonica HOM05D002444 ORTHO05D009235 9.0e-14 83.2 63 60.3
VMungo0251G0274 Vigna mungo HOM05D002444 ORTHO05D009235 2.6e-13 81.6 103 37.9
Psat4g114600 Pisum sativum HOM05D002444 ORTHO05D009235 5.8e-13 80.5 332 43.4
Ca_22522_v3 Cicer arietinum L. HOM05D002444 ORTHO05D009235 4.9e-12 77.4 68 48.5
Atru.chr2.1158 Acer truncatum HOM05D002444 ORTHO05D009235 2.4e-11 75.1 78 42.3
Atru.chr2.1176 Acer truncatum HOM05D002444 ORTHO05D009235 2.4e-11 75.1 78 42.3
Zm00001eb028360 Zea mays HOM05D002444 ORTHO05D009235 2.4e-11 75.1 118 34.7
Gohir.D02G117100 Gossypium hirsutum HOM05D002444 ORTHO05D009235 1.2e-10 72.8 77 36.4
Gorai.005G136500 Gossypium raimondii HOM05D002444 ORTHO05D009235 1.2e-10 72.8 77 36.4
AT3G16890 Arabidopsis thaliana HOM05D002444 ORTHO05D009235 2.1e-10 72.0 61 47.5
Phvul.003G282300 Phaseolus vulgaris HOM05D002444 ORTHO05D009235 2.1e-10 72.0 68 42.6
Oeu036988.1 Olea europaea HOM05D002444 ORTHO05D009235 3.5e-10 71.2 78 39.7
CDE02G3715 Ceratophyllum demersum HOM05D002444 ORTHO05D009235 6.0e-10 70.5 70 42.9
Os12g0557800 Oryza sativa ssp. japonica HOM05D002444 ORTHO05D009235 3.0e-09 68.2 121 34.7
MBI06_g47128_MAGBIO Magnolia biondii HOM05D002444 ORTHO05D009235 2.1e-07 62.0 176 30.1
ATR0743G013 Amborella trichopoda HOM05D002444 ORTHO05D009235 2.8e-07 61.6 106 31.1
AUR62016136 Chenopodium quinoa HOM05D000356 ORTHO05D000265 1.8e-06 58.9 71 36.6


User provided reference genes

Program Settings