Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G00085 Erythranthe guttata HOM05D007152 ORTHO05D008912 4.6e-98 361.3 193 100.0
Migut.G00124 Erythranthe guttata HOM05D007152 ORTHO05D008912 2.1e-95 352.4 193 96.4
SalBow2G3473 Salvia bowleyana HOM05D007152 ORTHO05D008912 4.4e-64 248.4 195 70.3
SGA_v2.0_scaffold18G08363 Striga asiatica HOM05D007152 ORTHO05D008912 1.2e-45 187.2 195 62.1
Nitab4.5_0007965g0010 Nicotiana tabacum HOM05D007152 ORTHO05D008912 2.3e-33 146.4 202 47.5
PGSC0003DMG400017287 Solanum tuberosum HOM05D007152 ORTHO05D008912 5.2e-33 145.2 212 48.6
Gohir.D10G173100 Gossypium hirsutum HOM05D007152 ORTHO05D008912 1.6e-26 123.6 216 41.7
QL06p010801 Quercus lobata HOM05D007152 ORTHO05D008912 1.8e-25 120.2 200 45.0
Gohir.A10G167100 Gossypium hirsutum HOM05D007152 ORTHO05D008912 2.3e-25 119.8 217 42.4
Gorai.011G193700 Gossypium raimondii HOM05D007152 ORTHO05D008912 5.2e-25 118.6 217 41.5
Dinv44343 Davidia involucrata HOM05D007152 ORTHO05D008912 6.8e-25 118.2 195 47.7
Cc03_g01440 Coffea canephora HOM05D007152 ORTHO05D008912 8.9e-25 117.9 202 48.0
MBI18_g04558_MAGBIO Magnolia biondii HOM05D000387 ORTHO05D008912 8.9e-25 117.9 192 42.7
Hma1.2p1_1352F.1_g277500 Hydrangea macrophylla HOM05D007152 ORTHO05D008912 2.6e-24 116.3 199 43.7
TWI73G1002 Tripterygium wilfordii HOM05D007152 ORTHO05D008912 2.6e-24 116.3 209 43.5
Peaxi162Scf00065g10111 Petunia axillaris HOM05D007152 ORTHO05D008912 3.4e-24 115.9 210 46.2
Thecc.04G290300 Theobroma cacao HOM05D007152 ORTHO05D008912 3.4e-24 115.9 219 39.3
TAR362G0707 Trochodendron aralioides HOM05D007152 ORTHO05D008912 7.5e-24 114.8 207 45.4
Sopen07g029030 Solanum pennellii HOM05D007152 ORTHO05D008912 9.8e-24 114.4 213 45.5
MELO3C021305.2 Cucumis melo HOM05D007152 ORTHO05D008912 1.3e-23 114.0 214 42.1
CANSAT78G0935 Cannabis sativa HOM05D007152 ORTHO05D008912 1.7e-23 113.6 208 43.8
Aqoxy2G02883 Aquilegia oxysepala HOM05D007152 ORTHO05D008912 2.2e-23 113.2 202 45.0
THA.LOC104818902 Tarenaya hassleriana HOM05D007152 ORTHO05D008912 4.9e-23 112.1 208 37.5
Haze_01149 Corylus avellana HOM05D007152 ORTHO05D008912 1.4e-22 110.5 198 42.4
Nitab4.5_0000306g0360 Nicotiana tabacum HOM05D007152 ORTHO05D008912 1.9e-22 110.2 194 44.3
GSVIVG01035097001 Vitis vinifera HOM05D007152 ORTHO05D008912 1.9e-22 110.2 210 44.3
Lsat_1_v5_gn_3_21801 Lactuca sativa HOM05D007152 ORTHO05D008912 4.1e-22 109.0 199 44.7
PGR004G0508 Punica granatum HOM05D007152 ORTHO05D008912 4.1e-22 109.0 204 39.7
ClCG06G004920 Citrullus lanatus HOM05D007152 ORTHO05D008912 1.2e-21 107.5 214 37.9
Nn6g34202 Nelumbo nucifera HOM05D007152 ORTHO05D008912 1.6e-21 107.1 210 44.3
CiPaw.01G144800 Carya illinoinensis HOM05D007152 ORTHO05D008912 3.5e-21 105.9 206 42.2
Duzib212G0417 Durio zibethinus HOM05D007152 ORTHO05D008912 4.6e-21 105.5 217 38.7
Prupe.1G130200 Prunus persica HOM05D007152 ORTHO05D008912 7.8e-21 104.8 208 40.4
Sc13g0003130 Simmondsia chinensis HOM05D007152 ORTHO05D008912 7.8e-21 104.8 100 63.0
CiPaw.02G079300 Carya illinoinensis HOM05D007152 ORTHO05D008912 1.0e-20 104.4 200 39.5
Actinidia14275 Actinidia chinensis HOM05D007152 ORTHO05D008912 1.3e-20 104.0 189 46.6
Solyc07g055660.2 Solanum lycopersicum HOM05D007152 ORTHO05D008912 3.0e-20 102.8 212 36.3
MD16G1162700 Malus domestica HOM05D007152 ORTHO05D008912 1.9e-19 100.1 212 41.0
ECA246G2204 Erigeron canadensis HOM05D007152 ORTHO05D008912 3.3e-19 99.4 194 43.3
RcHm_v2.0_Chr4g0423591 Rosa chinensis HOM05D007152 ORTHO05D008912 4.3e-19 99.0 205 39.5
CsaV3_6G022730 Cucumis sativus L. HOM05D007152 ORTHO05D008912 7.3e-19 98.2 194 41.8
Lj4g0009216 Lotus japonicus HOM05D007152 ORTHO05D008912 7.3e-19 98.2 170 44.7
VMungo1215G1115 Vigna mungo HOM05D007152 ORTHO05D008912 1.6e-18 97.1 167 44.9
Eucgr.H03966 Eucalyptus grandis HOM05D007152 ORTHO05D008912 2.1e-18 96.7 207 41.5
Atru.chr4.2916 Acer truncatum HOM05D007152 ORTHO05D008912 2.8e-18 96.3 193 39.4
CARHR081420 Cardamine hirsuta HOM05D007152 ORTHO05D008912 3.6e-18 95.9 203 39.9
Glyma.17G029000 Glycine max HOM05D007152 ORTHO05D008912 1.1e-17 94.4 152 47.4
Sed0011406 Sechium edule HOM05D007152 ORTHO05D008912 1.4e-17 94.0 72 54.2
C05p60530 Brassica napus HOM05D007152 ORTHO05D008912 2.3e-17 93.2 209 40.7
BolC5t34707H Brassica oleracea HOM05D007152 ORTHO05D008912 2.3e-17 93.2 209 40.7
Actinidia13384 Actinidia chinensis HOM05D007152 ORTHO05D008912 3.1e-17 92.8 56 71.4
Thhalv10022432m.g Eutrema salsugineum HOM05D007152 ORTHO05D008912 4.0e-17 92.4 207 42.0
Phvul.003G108000 Phaseolus vulgaris HOM05D007152 ORTHO05D008912 4.0e-17 92.4 168 47.0
Aa31LG5G17390 Aethionema arabicum HOM05D007152 ORTHO05D008912 5.2e-17 92.0 205 42.9
Glyma.07G244800 Glycine max HOM05D007152 ORTHO05D008912 8.9e-17 91.3 150 47.3
BNapus_Darmor_BZH_scaffold_117p00080 Brassica napus HOM05D007152 ORTHO05D008912 1.5e-16 90.5 195 43.6
Duzib151G0510 Durio zibethinus HOM05D007152 ORTHO05D008912 1.5e-16 90.5 199 42.2
FvH4_4g18790 Fragaria vesca HOM05D007152 ORTHO05D008912 2.6e-16 89.7 203 38.4
FAN12G2857 Fragaria x ananassa HOM05D007152 ORTHO05D008912 2.6e-16 89.7 203 38.4
Carub.0003s0633 Capsella rubella HOM05D007152 ORTHO05D008912 3.4e-16 89.4 207 39.6
FAN12G4239 Fragaria x ananassa HOM05D007152 ORTHO05D008912 3.4e-16 89.4 203 38.4
Manes.15G009801 Manihot esculenta HOM05D007152 ORTHO05D008912 3.4e-16 89.4 111 44.1
Sabra10G0005500 Salix brachista HOM05D007152 ORTHO05D008912 5.8e-16 88.6 79 58.2
BolC3t16516H Brassica oleracea HOM05D007152 ORTHO05D008912 9.8e-16 87.8 194 37.6
A03p34880 Brassica napus HOM05D007152 ORTHO05D008912 1.3e-15 87.4 194 40.7
Manes.03G199400 Manihot esculenta HOM05D007152 ORTHO05D008912 1.3e-15 87.4 208 34.1
BraA05t22853Z Brassica rapa HOM05D007152 ORTHO05D008912 1.7e-15 87.0 203 40.9
Potri.010G006600 Populus trichocarpa HOM05D007152 ORTHO05D008912 2.2e-15 86.7 121 56.2
Lalb_Chr20g0121161 Lupinus albus HOM05D007152 ORTHO05D008912 2.9e-15 86.3 144 43.8
CSS0046950 Camellia sinensis var. sinensis HOM05D007152 ORTHO05D008912 3.7e-15 85.9 189 38.6
A05p41300 Brassica napus HOM05D007152 ORTHO05D008912 4.9e-15 85.5 204 41.2
CSS0044056 Camellia sinensis var. sinensis HOM05D007152 ORTHO05D008912 1.4e-14 84.0 189 38.1
Eucgr.B01571 Eucalyptus grandis HOM05D007152 ORTHO05D008912 2.4e-14 83.2 189 40.2
FAN07G1963 Fragaria x ananassa HOM05D007152 ORTHO05D008912 4.1e-14 82.4 201 38.8
Lsat_1_v5_gn_6_76040 Lactuca sativa HOM05D007152 ORTHO05D008912 1.6e-13 80.5 186 39.8
Sp3g05760 Schrenkiella parvula HOM05D007152 ORTHO05D008912 1.6e-13 80.5 203 38.4
Ciclev10006039m.g Citrus clementina HOM05D007152 ORTHO05D008912 2.7e-13 79.7 194 34.5
FAN17G1647 Fragaria x ananassa HOM05D007152 ORTHO05D008912 2.7e-13 79.7 197 37.6
AT3G06780 Arabidopsis thaliana HOM05D007152 ORTHO05D008912 3.5e-13 79.3 205 37.1
C03p42450 Brassica napus HOM05D007152 ORTHO05D008912 3.5e-13 79.3 194 36.6
BraA01t04415Z Brassica rapa HOM05D007152 ORTHO05D008912 3.5e-13 79.3 195 41.5
AL3G17910 Arabidopsis lyrata HOM05D007152 ORTHO05D008912 4.6e-13 79.0 206 36.9
HanXRQChr07g0199211 Helianthus annuus HOM05D007152 ORTHO05D008912 6.0e-13 78.6 197 38.6
Medtr4g120400 Medicago truncatula HOM05D007152 ORTHO05D008912 6.0e-13 78.6 166 43.4
COL.COLO4_13806 Corchorus olitorius HOM05D007152 ORTHO05D008912 1.0e-12 77.8 216 30.1
Ah.04g153700 Amaranthus hybridus HOM05D007152 ORTHO05D008912 1.3e-12 77.4 58 55.2
Cfa015435 Carpinus fangiana HOM05D007152 ORTHO05D008912 1.3e-12 77.4 198 36.4
EL10Ac3g06653 Beta vulgaris HOM05D007152 ORTHO05D008912 3.9e-12 75.9 97 53.6
ECA240G1188 Erigeron canadensis HOM05D007152 ORTHO05D008912 5.1e-12 75.5 185 37.3
Ca_21475_v3 Cicer arietinum L. HOM05D007152 ORTHO05D008912 8.6e-12 74.7 160 42.5
Potri.008G211000 Populus trichocarpa HOM05D007152 ORTHO05D008912 1.1e-11 74.3 200 35.0
AUR62018060 Chenopodium quinoa HOM05D007152 ORTHO05D008912 1.5e-11 73.9 76 50.0
Eucgr.G02132 Eucalyptus grandis HOM05D007152 ORTHO05D008912 2.5e-11 73.2 71 50.7
Nn2g11629 Nelumbo nucifera HOM05D000191 ORTHO05D000122 3.3e-11 72.8 183 32.2
Lalb_Chr12g0201151 Lupinus albus HOM05D007152 ORTHO05D008912 1.2e-10 70.9 163 40.5
DCAR_027047 Daucus carota HOM05D007152 ORTHO05D008912 2.8e-10 69.7 193 38.3
Eucgr.G02139 Eucalyptus grandis HOM05D007152 ORTHO05D008912 4.7e-10 68.9 120 46.7
Sabra08G0151100 Salix brachista HOM05D007152 ORTHO05D008912 6.2e-10 68.6 62 56.5
PSO407G0318 Papaver somniferum HOM05D007152 ORTHO05D008912 8.1e-10 68.2 197 37.1
TPR.G22774 Trifolium pratense HOM05D007152 ORTHO05D008912 1.1e-09 67.8 127 42.5
Nn4g25735 Nelumbo nucifera HOM05D007152 ORTHO05D008912 6.8e-09 65.1 172 36.6
Dinv28193 Davidia involucrata HOM05D007152 ORTHO05D008912 3.4e-08 62.8 31 71.0
RcHm_v2.0_Chr7g0221621 Rosa chinensis HOM05D007152 ORTHO05D008912 2.9e-07 59.7 47 51.1


User provided reference genes

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