Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F02113 Erythranthe guttata HOM05D006840 ORTHO05D008588 9.1e-160 567.0 316 100.0
Manes.13G004800 Manihot esculenta HOM05D006840 ORTHO05D008588 7.0e-112 407.9 261 77.0
MSTRG.27397 Avicennia marina HOM05D006840 ORTHO05D008588 2.0e-111 406.4 324 68.5
Potri.013G085300 Populus trichocarpa HOM05D006840 ORTHO05D008588 1.3e-110 403.7 273 73.6
Peaxi162Scf00529g00710 Petunia axillaris HOM05D006840 ORTHO05D008588 3.0e-110 402.5 259 75.3
Rhsim06G0181200 Rhododendron simsii HOM05D006840 ORTHO05D008588 3.9e-110 402.1 257 76.3
Nitab4.5_0000083g0050 Nicotiana tabacum HOM05D006840 ORTHO05D008588 1.5e-109 400.2 259 74.9
SGA_v2.0_scaffold62G21495 Striga asiatica HOM05D006840 ORTHO05D008588 1.5e-109 400.2 273 72.9
Sabra13G0078300 Salix brachista HOM05D006840 ORTHO05D008588 1.2e-108 397.1 273 72.2
CSS0048734 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 2.8e-108 396.0 271 72.7
PGSC0003DMG400010521 Solanum tuberosum HOM05D006840 ORTHO05D008588 1.8e-107 393.3 259 74.1
Nitab4.5_0009290g0020 Nicotiana tabacum HOM05D006840 ORTHO05D008588 3.1e-107 392.5 270 71.5
Gohir.D08G247000 Gossypium hirsutum HOM05D006840 ORTHO05D008588 1.5e-106 390.2 259 74.5
EL10Ac4g09995 Beta vulgaris HOM05D006840 ORTHO05D008588 3.4e-106 389.0 257 74.7
CAN.G642.5 Capsicum annuum HOM05D006840 ORTHO05D008588 3.4e-106 389.0 260 73.1
Gohir.A08G226600 Gossypium hirsutum HOM05D006840 ORTHO05D008588 3.4e-106 389.0 259 74.1
QL01p049413 Quercus lobata HOM05D006840 ORTHO05D008588 1.3e-105 387.1 262 72.9
CiPaw.08G114500 Carya illinoinensis HOM05D006840 ORTHO05D008588 2.9e-105 386.0 263 72.2
PGR119G2059 Punica granatum HOM05D006840 ORTHO05D008588 2.9e-105 386.0 259 74.1
AUR62000298 Chenopodium quinoa HOM05D006840 ORTHO05D008588 4.9e-105 385.2 261 74.7
Duzib106G1767 Durio zibethinus HOM05D006840 ORTHO05D008588 4.9e-105 385.2 261 72.0
Solyc04g056580.3 Solanum lycopersicum HOM05D006840 ORTHO05D008588 4.9e-105 385.2 259 73.4
Eucgr.B01421 Eucalyptus grandis HOM05D006840 ORTHO05D008588 8.3e-105 384.4 259 71.8
Oeu020467.1 Olea europaea HOM05D006840 ORTHO05D008588 1.1e-104 384.0 227 81.5
SalBow1G4059 Salvia bowleyana HOM05D006840 ORTHO05D008588 1.1e-104 384.0 255 75.3
GSVIVG01019072001 Vitis vinifera HOM05D006840 ORTHO05D008588 1.9e-104 383.3 259 73.4
Sopen04g025500 Solanum pennellii HOM05D006840 ORTHO05D008588 2.4e-104 382.9 259 73.4
AUR62006644 Chenopodium quinoa HOM05D006840 ORTHO05D008588 3.2e-104 382.5 257 73.9
CANSAT54G1191 Cannabis sativa HOM05D006840 ORTHO05D008588 7.1e-104 381.3 263 71.5
Lj1g0027213 Lotus japonicus HOM05D006840 ORTHO05D008588 1.2e-103 380.6 265 71.7
Gorai.004G263500 Gossypium raimondii HOM05D006840 ORTHO05D008588 1.7e-102 376.7 284 68.0
vmacro12041 Vaccinium macrocarpon HOM05D006840 ORTHO05D008588 2.3e-102 376.3 269 69.5
Lj1A575G23 Lonicera japonica HOM05D006840 ORTHO05D008588 3.0e-102 375.9 251 71.7
ECA232G2794 Erigeron canadensis HOM05D006840 ORTHO05D008588 6.6e-102 374.8 259 69.1
Prupe.6G362300 Prunus persica HOM05D006840 ORTHO05D008588 6.6e-102 374.8 265 69.8
MD12G1264100 Malus domestica HOM05D006840 ORTHO05D008588 3.3e-101 372.5 262 70.6
RcHm_v2.0_Chr3g0447741 Rosa chinensis HOM05D006840 ORTHO05D008588 5.6e-101 371.7 262 71.8
Lsat_1_v5_gn_0_18400 Lactuca sativa HOM05D006840 ORTHO05D008588 1.2e-100 370.5 259 69.9
TPR.G23771 Trifolium pratense HOM05D006840 ORTHO05D008588 1.2e-100 370.5 260 71.5
Cc09_g03780 Coffea canephora HOM05D006840 ORTHO05D008588 2.1e-100 369.8 273 68.1
Glyma.18G243000 Glycine max HOM05D006840 ORTHO05D008588 2.8e-100 369.4 269 68.8
Atru.BG.274.p Acer truncatum HOM05D006840 ORTHO05D008588 4.7e-100 368.6 235 76.2
DCAR_028385 Daucus carota HOM05D006840 ORTHO05D008588 4.7e-100 368.6 273 70.0
Psat3g102720 Pisum sativum HOM05D006840 ORTHO05D008588 4.7e-100 368.6 271 68.6
FvH4_6g00410 Fragaria vesca HOM05D006840 ORTHO05D008588 1.1e-99 367.5 259 71.0
HanXRQChr15g0492181 Helianthus annuus HOM05D006840 ORTHO05D008588 1.4e-99 367.1 257 70.0
Sc06g0005020 Simmondsia chinensis HOM05D006840 ORTHO05D008588 2.3e-99 366.3 258 69.0
FAN09G3232 Fragaria x ananassa HOM05D006840 ORTHO05D008588 4.0e-99 365.5 259 70.7
CSS0032443 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 1.5e-98 363.6 225 77.3
Phvul.008G053500 Phaseolus vulgaris HOM05D006840 ORTHO05D008588 1.5e-98 363.6 261 69.0
TWI75G0198 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 2.6e-98 362.8 259 69.5
Glyma.09G249400 Glycine max HOM05D006840 ORTHO05D008588 3.4e-98 362.5 268 68.3
HanXRQChr15g0491491 Helianthus annuus HOM05D006840 ORTHO05D008588 3.4e-98 362.5 259 67.6
MELO3C010008.2 Cucumis melo HOM05D006840 ORTHO05D008588 5.8e-98 361.7 266 65.4
MD04G1245900 Malus domestica HOM05D006840 ORTHO05D008588 1.3e-97 360.5 250 72.0
TWI36G0520 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 4.9e-97 358.6 257 68.5
CsaV3_1G044150 Cucumis sativus L. HOM05D006840 ORTHO05D008588 6.4e-97 358.2 265 64.9
arahy.Tifrunner.gnm1.ann1.SXK3FV Arachis hypogaea HOM05D006840 ORTHO05D008588 8.3e-97 357.8 257 69.6
Hund21908 Selenicereus undatus HOM05D006840 ORTHO05D008588 8.3e-97 357.8 298 61.7
VMungo1383G2163 Vigna mungo HOM05D006840 ORTHO05D008588 5.4e-96 355.1 262 68.3
ATR0215G001 Amborella trichopoda HOM05D006840 ORTHO05D008588 4.6e-95 352.1 250 67.2
Sed0002286 Sechium edule HOM05D006840 ORTHO05D008588 6.0e-95 351.7 259 65.6
AL2G20230 Arabidopsis lyrata HOM05D006840 ORTHO05D008588 8.6e-94 347.8 253 69.2
PSO170G0121 Papaver somniferum HOM05D006840 ORTHO05D008588 8.6e-94 347.8 265 66.8
Lalb_Chr03g0038681 Lupinus albus HOM05D006840 ORTHO05D008588 1.9e-93 346.7 261 68.2
PSO357G0633 Papaver somniferum HOM05D006840 ORTHO05D008588 1.9e-93 346.7 265 66.8
ClCG03G011690 Citrullus lanatus HOM05D006840 ORTHO05D008588 3.3e-93 345.9 281 61.2
Carub.0002s1076 Capsella rubella HOM05D006840 ORTHO05D008588 7.3e-93 344.7 256 67.6
AT1G65230 Arabidopsis thaliana HOM05D006840 ORTHO05D008588 2.1e-92 343.2 256 66.8
Medtr7g080220 Medicago truncatula HOM05D006840 ORTHO05D008588 2.1e-92 343.2 284 63.4
THA.LOC104821923 Tarenaya hassleriana HOM05D006840 ORTHO05D008588 4.7e-92 342.0 256 67.2
Dinv29090 Davidia involucrata HOM05D006840 ORTHO05D008588 6.2e-92 341.7 227 73.6
CARHR056840 Cardamine hirsuta HOM05D006840 ORTHO05D008588 1.1e-91 340.9 257 68.5
arahy.Tifrunner.gnm1.ann1.1ED5VS Arachis hypogaea HOM05D006840 ORTHO05D008588 1.5e-90 337.0 260 65.8
HPP92_000447 Vanilla planifolia HOM05D006840 ORTHO05D008588 4.4e-90 335.5 270 62.6
Aa31LG2G2360 Aethionema arabicum HOM05D006840 ORTHO05D008588 7.6e-90 334.7 281 60.9
Thhalv10018969m.g Eutrema salsugineum HOM05D006840 ORTHO05D008588 1.7e-89 333.6 256 65.6
BcaC03g14685 Brassica carinata HOM05D006840 ORTHO05D008588 8.4e-89 331.3 256 64.1
Aqoxy5G00025 Aquilegia oxysepala HOM05D006840 ORTHO05D008588 1.1e-88 330.9 237 67.9
Nn7g37259 Nelumbo nucifera HOM05D006840 ORTHO05D008588 2.4e-88 329.7 259 64.5
Cfa006254 Carpinus fangiana HOM05D006840 ORTHO05D008588 3.2e-88 329.3 224 70.5
A02p13110 Brassica napus HOM05D006840 ORTHO05D008588 4.2e-88 328.9 255 63.9
C02p21250 Brassica napus HOM05D006840 ORTHO05D008588 4.2e-88 328.9 256 64.1
BraA02t06367Z Brassica rapa HOM05D006840 ORTHO05D008588 4.2e-88 328.9 255 63.9
BcaB05g24097 Brassica carinata HOM05D006840 ORTHO05D008588 5.4e-88 328.6 255 63.5
BolC2t08265H Brassica oleracea HOM05D006840 ORTHO05D008588 9.3e-88 327.8 256 63.3
Thecc.05G192600 Theobroma cacao HOM05D006840 ORTHO05D008588 9.3e-88 327.8 227 70.5
Haze_04572 Corylus avellana HOM05D006840 ORTHO05D008588 2.3e-86 323.2 224 69.2
Os01g0912700 Oryza sativa ssp. japonica HOM05D006840 ORTHO05D008588 5.1e-86 322.0 260 62.7
FAN02G1048 Fragaria x ananassa HOM05D006840 ORTHO05D008588 4.3e-85 318.9 228 69.3
FAN05G5535 Fragaria x ananassa HOM05D006840 ORTHO05D008588 9.6e-85 317.8 228 68.9
Ciclev10013335m.g Citrus clementina HOM05D006840 ORTHO05D008588 6.2e-84 315.1 260 63.8
FAN14G4782 Fragaria x ananassa HOM05D006840 ORTHO05D008588 8.1e-84 314.7 228 68.9
Sp5g19910 Schrenkiella parvula HOM05D006840 ORTHO05D008588 2.0e-82 310.1 256 61.7
CDE02G0188 Ceratophyllum demersum HOM05D006840 ORTHO05D008588 1.4e-80 303.9 245 62.4
Lj1A595G27 Lonicera japonica HOM05D006840 ORTHO05D008588 2.4e-80 303.1 301 57.1
Ca_07995_v3 Cicer arietinum L. HOM05D006840 ORTHO05D008588 9.3e-80 301.2 238 63.9
Zm00001eb365000 Zea mays HOM05D006840 ORTHO05D008588 5.1e-78 295.4 240 62.5
Cpa.g.sc39.39 Carica papaya HOM05D006840 ORTHO05D008588 2.8e-76 289.7 274 58.0
Pp3c9_3810 Physcomitrium patens HOM05D006840 ORTHO05D008588 6.9e-75 285.0 249 55.0
unitig_22.g5732 Utricularia gibba HOM05D006840 ORTHO05D008588 1.2e-74 284.3 229 64.6
Actinidia31085 Actinidia chinensis HOM05D006840 ORTHO05D008588 7.6e-74 281.6 217 64.5
Mapoly0031s0189 Marchantia polymorpha HOM05D006840 ORTHO05D008588 2.9e-73 279.6 237 58.6
SMO353G0271 Selaginella moellendorffii HOM05D006840 ORTHO05D008588 1.8e-70 270.4 260 54.6
MBI19_g03256_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 3.0e-70 269.6 236 60.6
Pp3c15_10950 Physcomitrium patens HOM05D006840 ORTHO05D008588 1.3e-60 237.7 244 49.2
AagrBONN_evm.TU.Sc2ySwM_228.2548 Anthoceros agrestis HOM05D006840 ORTHO05D008588 5.3e-59 232.3 240 51.2
SEGI_09257 Sequoiadendron giganteum HOM05D006840 ORTHO05D008588 6.5e-57 225.3 196 58.7
MBI07_g00615_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 1.1e-56 224.6 148 75.7
CBR_g8822 Chara braunii HOM05D006840 ORTHO05D008588 1.1e-51 208.0 220 49.1
MCO02G353 Micromonas commoda HOM05D006840 ORTHO05D008588 7.7e-26 122.1 221 33.9
Actinidia34706 Actinidia chinensis HOM05D006840 ORTHO05D008588 9.4e-24 115.2 122 54.1
SEGI_35940 Sequoiadendron giganteum HOM05D006840 ORTHO05D008588 3.0e-22 110.2 99 56.6
Cre12.g536800 Chlamydomonas reinhardtii HOM05D006840 ORTHO05D008588 2.0e-18 97.4 250 28.4
Zm00001eb424130 Zea mays HOM05D006840 ORTHO05D008588 7.5e-13 79.0 60 61.7
Zm00001eb424170 Zea mays HOM05D006840 ORTHO05D008588 7.5e-13 79.0 60 61.7
PRCOL_00007103 Prasinoderma coloniale HOM05D006840 ORTHO05D008588 3.8e-09 66.6 229 26.2


User provided reference genes

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