Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F02096 Erythranthe guttata HOM05D005923 ORTHO05D007376 0.0e+00 1496.5 744 100.0
MSTRG.27409 Avicennia marina HOM05D005923 ORTHO05D007376 2.6e-290 1001.9 748 66.6
SalBow1G7804 Salvia bowleyana HOM05D005923 ORTHO05D007376 5.1e-278 961.1 740 66.1
SGA_v2.0_scaffold62G21491 Striga asiatica HOM05D005923 ORTHO05D007376 3.6e-268 928.3 728 63.3
Oeu034703.2 Olea europaea HOM05D005923 ORTHO05D007376 2.1e-263 912.5 793 59.0
SalBow1G1244 Salvia bowleyana HOM05D005923 ORTHO05D007376 4.0e-259 898.3 700 65.7
Nitab4.5_0001003g0070 Nicotiana tabacum HOM05D005923 ORTHO05D007376 1.1e-253 880.2 701 61.2
Rhsim05G0165000 Rhododendron simsii HOM05D005923 ORTHO05D007376 2.1e-252 875.9 705 61.6
CAN.G321.22 Capsicum annuum HOM05D005923 ORTHO05D007376 4.8e-252 874.8 734 59.9
Peaxi162Scf00296g01112 Petunia axillaris HOM05D005923 ORTHO05D007376 1.7e-249 866.3 701 61.6
CSS0002064 Camellia sinensis var. sinensis HOM05D005923 ORTHO05D007376 4.9e-249 864.8 693 61.2
Actinidia03247 Actinidia chinensis HOM05D005923 ORTHO05D007376 1.1e-248 863.6 738 59.2
Sopen11g004360 Solanum pennellii HOM05D005923 ORTHO05D007376 2.7e-247 859.0 700 60.6
TAR365G1048 Trochodendron aralioides HOM05D005923 ORTHO05D007376 1.0e-246 857.1 739 59.4
Cfa006234 Carpinus fangiana HOM05D005923 ORTHO05D007376 1.9e-245 852.8 719 59.5
Haze_04596 Corylus avellana HOM05D005923 ORTHO05D007376 5.7e-245 851.3 707 59.8
Duzib128G1624 Durio zibethinus HOM05D005923 ORTHO05D007376 5.7e-245 851.3 745 58.4
CiPaw.07G083600 Carya illinoinensis HOM05D005923 ORTHO05D007376 1.3e-244 850.1 704 59.9
RcHm_v2.0_Chr3g0447491 Rosa chinensis HOM05D005923 ORTHO05D007376 1.6e-244 849.7 697 61.3
Manes.12G002100 Manihot esculenta HOM05D005923 ORTHO05D007376 2.6e-242 842.4 702 59.0
QL10p015972 Quercus lobata HOM05D005923 ORTHO05D007376 4.5e-242 841.6 698 60.6
TWI18G0568 Tripterygium wilfordii HOM05D005923 ORTHO05D007376 1.0e-241 840.5 712 58.8
MD12G1262500 Malus domestica HOM05D005923 ORTHO05D007376 1.4e-240 836.6 701 60.5
Hund21927 Selenicereus undatus HOM05D005923 ORTHO05D007376 1.9e-240 836.3 701 59.2
Ciclev10011172m.g Citrus clementina HOM05D005923 ORTHO05D007376 1.2e-239 833.6 730 57.4
Cc09_g04040 Coffea canephora HOM05D005923 ORTHO05D007376 3.6e-239 832.0 709 58.7
Potri.010G180800 Populus trichocarpa HOM05D005923 ORTHO05D007376 1.0e-238 830.5 740 56.2
Lj1g0007040 Lotus japonicus HOM05D005923 ORTHO05D007376 3.9e-238 828.6 736 57.9
Gorai.003G088600 Gossypium raimondii HOM05D005923 ORTHO05D007376 6.7e-238 827.8 712 59.3
Gohir.D03G071400 Gossypium hirsutum HOM05D005923 ORTHO05D007376 8.8e-238 827.4 712 59.3
Potri.008G077000 Populus trichocarpa HOM05D005923 ORTHO05D007376 2.0e-237 826.2 740 55.9
FvH4_6g00140 Fragaria vesca HOM05D005923 ORTHO05D007376 3.3e-237 825.5 698 58.9
Lalb_Chr03g0038141 Lupinus albus HOM05D005923 ORTHO05D007376 3.3e-237 825.5 708 59.5
COL.COLO4_36605 Corchorus olitorius HOM05D005923 ORTHO05D007376 2.2e-236 822.8 745 56.8
AUR62014468 Chenopodium quinoa HOM05D005923 ORTHO05D007376 2.4e-235 819.3 703 58.5
CANSAT21G0310 Cannabis sativa HOM05D005923 ORTHO05D007376 1.5e-234 816.6 740 56.5
TPR.G31231 Trifolium pratense HOM05D005923 ORTHO05D007376 3.4e-234 815.5 704 58.7
Cpa.g.sc99.42 Carica papaya HOM05D005923 ORTHO05D007376 1.7e-233 813.1 699 58.7
Glyma.09G248100 Glycine max HOM05D005923 ORTHO05D007376 8.5e-233 810.8 691 59.9
Glyma.18G244700 Glycine max HOM05D005923 ORTHO05D007376 8.5e-233 810.8 700 59.1
AUR62034530 Chenopodium quinoa HOM05D005923 ORTHO05D007376 3.2e-232 808.9 703 57.6
Medtr7g080490 Medicago truncatula HOM05D005923 ORTHO05D007376 4.2e-232 808.5 706 58.8
Actinidia06787 Actinidia chinensis HOM05D005923 ORTHO05D007376 7.2e-232 807.7 734 56.7
Atru.chr12.1669 Acer truncatum HOM05D005923 ORTHO05D007376 9.4e-232 807.4 709 58.3
Sabra08G0057400 Salix brachista HOM05D005923 ORTHO05D007376 3.6e-231 805.4 700 57.4
Solyc11g008570.2 Solanum lycopersicum HOM05D005923 ORTHO05D007376 3.6e-231 805.4 700 57.7
GSVIVG01003759001 Vitis vinifera HOM05D005923 ORTHO05D007376 1.4e-230 803.5 701 59.3
Dinv21358 Davidia involucrata HOM05D005923 ORTHO05D007376 2.3e-230 802.7 618 63.3
ClCG11G012400 Citrullus lanatus HOM05D005923 ORTHO05D007376 1.1e-229 800.4 745 54.9
Lsat_1_v5_gn_0_14641 Lactuca sativa HOM05D005923 ORTHO05D007376 2.6e-229 799.3 729 54.0
Sabra10G0138600 Salix brachista HOM05D005923 ORTHO05D007376 4.4e-229 798.5 758 53.8
EL10Ac4g10017 Beta vulgaris HOM05D005923 ORTHO05D007376 1.7e-228 796.6 741 55.5
Prupe.6G364500 Prunus persica HOM05D005923 ORTHO05D007376 2.8e-228 795.8 681 59.3
CsaV3_2G010290 Cucumis sativus L. HOM05D005923 ORTHO05D007376 8.2e-228 794.3 744 54.7
Phvul.008G051900 Phaseolus vulgaris HOM05D005923 ORTHO05D007376 4.1e-227 792.0 729 55.8
Psat3g105160 Pisum sativum HOM05D005923 ORTHO05D007376 7.0e-227 791.2 703 57.5
Sc16g0010600 Simmondsia chinensis HOM05D005923 ORTHO05D007376 1.7e-225 786.6 739 55.2
PGR031G2609 Punica granatum HOM05D005923 ORTHO05D007376 2.9e-225 785.8 743 54.5
unitig_46.g18570 Utricularia gibba HOM05D005923 ORTHO05D007376 1.5e-224 783.5 752 54.4
Sed0021637 Sechium edule HOM05D005923 ORTHO05D007376 4.2e-224 781.9 708 55.4
Ca_08014_v3 Cicer arietinum L. HOM05D005923 ORTHO05D007376 5.5e-224 781.6 697 57.2
THA.LOC104827232 Tarenaya hassleriana HOM05D005923 ORTHO05D007376 1.2e-223 780.4 738 54.3
Thhalv10020144m.g Eutrema salsugineum HOM05D005923 ORTHO05D007376 2.6e-221 772.7 716 55.3
Ah.04g159240 Amaranthus hybridus HOM05D005923 ORTHO05D007376 4.4e-221 771.9 727 55.2
AT3G03305 Arabidopsis thaliana HOM05D005923 ORTHO05D007376 4.4e-221 771.9 737 54.4
Carub.0003s0247 Capsella rubella HOM05D005923 ORTHO05D007376 5.7e-221 771.5 735 54.1
Eucgr.B01459 Eucalyptus grandis HOM05D005923 ORTHO05D007376 1.8e-219 766.5 710 54.9
AL3G12930 Arabidopsis lyrata HOM05D005923 ORTHO05D007376 3.1e-219 765.8 716 54.7
arahy.Tifrunner.gnm1.ann1.VQ08NH Arachis hypogaea HOM05D005923 ORTHO05D007376 4.1e-219 765.4 724 55.0
Sp3g02330 Schrenkiella parvula HOM05D005923 ORTHO05D007376 4.1e-219 765.4 716 55.3
CARHR077340 Cardamine hirsuta HOM05D005923 ORTHO05D007376 7.0e-219 764.6 721 54.2
PGSC0003DMG400016251 Solanum tuberosum HOM05D005923 ORTHO05D007376 4.5e-218 761.9 630 59.0
ECA232G3428 Erigeron canadensis HOM05D005923 ORTHO05D007376 6.5e-217 758.1 668 54.9
VMungo1383G0851 Vigna mungo HOM05D005923 ORTHO05D007376 6.5e-217 758.1 733 54.2
A05p43880 Brassica napus HOM05D005923 ORTHO05D007376 2.7e-215 752.7 716 54.5
C05p63470 Brassica napus HOM05D005923 ORTHO05D007376 3.6e-215 752.3 719 54.2
BraA05t23125Z Brassica rapa HOM05D005923 ORTHO05D007376 2.3e-214 749.6 716 54.2
Aa31LG5G13800 Aethionema arabicum HOM05D005923 ORTHO05D000304 5.2e-214 748.4 696 54.9
BolC5t35012H Brassica oleracea HOM05D005923 ORTHO05D007376 2.6e-213 746.1 718 53.5
Thecc.05G188500 Theobroma cacao HOM05D005923 ORTHO05D007376 1.7e-212 743.4 614 59.0
arahy.Tifrunner.gnm1.ann1.51VLQD Arachis hypogaea HOM05D005923 ORTHO05D007376 3.1e-211 739.2 735 52.4
PSO732G0688 Papaver somniferum HOM05D005923 ORTHO05D007376 4.1e-211 738.8 697 53.1
PSO675G7036 Papaver somniferum HOM05D005923 ORTHO05D007376 7.0e-211 738.0 730 51.2
HanXRQChr10g0283011 Helianthus annuus HOM05D005923 ORTHO05D007376 1.7e-209 733.4 680 53.2
Aqoxy2G04094 Aquilegia oxysepala HOM05D005923 ORTHO05D007376 8.5e-209 731.1 713 53.9
DCAR_031594 Daucus carota HOM05D005923 ORTHO05D007376 1.0e-206 724.2 646 56.2
MBI08_g20603_MAGBIO Magnolia biondii HOM05D005923 ORTHO05D007376 1.0e-201 707.6 743 51.3
Os01g0894000 Oryza sativa ssp. japonica HOM05D005923 ORTHO05D007376 4.1e-195 685.6 715 48.8
Zm00001eb144980 Zea mays HOM05D005923 ORTHO05D007376 2.0e-194 683.3 705 49.8
HPP92_013562 Vanilla planifolia HOM05D005923 ORTHO05D007376 2.1e-191 673.3 719 49.5
Nitab4.5_0009631g0020 Nicotiana tabacum HOM05D005923 ORTHO05D007376 7.8e-186 654.8 692 50.3
ATR0824G241 Amborella trichopoda HOM05D005923 ORTHO05D007376 1.9e-184 650.2 693 49.6
BcaC05g30305 Brassica carinata HOM05D000399 ORTHO05D000304 3.0e-177 626.3 701 48.9
Gohir.A02G106500 Gossypium hirsutum HOM05D005923 ORTHO05D007376 3.1e-174 616.3 547 56.7
Lj8A198T52 Lonicera japonica HOM05D005923 ORTHO05D007376 1.6e-170 604.0 639 52.0
Ah.06g195310 Amaranthus hybridus HOM05D005923 ORTHO05D007376 1.2e-167 594.3 581 53.4
Os07g0274100 Oryza sativa ssp. japonica HOM05D005923 ORTHO05D007376 1.7e-164 583.9 711 44.7
CDE09G0389 Ceratophyllum demersum HOM05D005923 ORTHO05D007376 1.8e-158 563.9 476 59.2
arahy.Tifrunner.gnm1.ann1.25XALN Arachis hypogaea HOM05D005923 ORTHO05D007376 1.3e-129 468.0 507 49.5
MBI12_g21502_MAGBIO Magnolia biondii HOM05D005923 ORTHO05D007376 1.5e-128 464.5 704 36.8
MELO3C008611.2 Cucumis melo HOM05D005923 ORTHO05D007376 6.3e-127 459.1 403 58.6
SMO228G0200 Selaginella moellendorffii HOM05D005923 ORTHO05D007376 3.1e-118 430.3 657 39.3
AagrBONN_evm.TU.Sc2ySwM_344.5471 Anthoceros agrestis HOM05D005923 ORTHO05D007376 1.0e-116 425.2 749 35.9
HPP92_028167 Vanilla planifolia HOM05D005923 ORTHO05D007376 8.5e-116 422.2 727 34.8
Mapoly0048s0028 Marchantia polymorpha HOM05D005923 ORTHO05D007376 5.5e-115 419.5 763 36.3
vmacro19542 Vaccinium macrocarpon HOM05D005923 ORTHO05D007376 5.1e-113 412.9 365 57.0
ATR0564G177 Amborella trichopoda HOM05D005923 ORTHO05D007376 9.7e-112 408.7 669 37.1
Pp3c8_13610 Physcomitrium patens HOM05D005923 ORTHO05D007376 5.5e-107 392.9 785 33.6
Atru.chr12.1657 Acer truncatum HOM05D005923 ORTHO05D007376 7.2e-107 392.5 426 49.5
Pp3c23_21040 Physcomitrium patens HOM05D005923 ORTHO05D007376 8.5e-100 369.0 763 33.3
Nn013s41460 Nelumbo nucifera HOM05D005923 ORTHO05D007376 3.8e-84 317.0 345 48.1
MD04G1248100 Malus domestica HOM05D005923 ORTHO05D007376 3.5e-77 293.9 335 48.4
Actinidia06786 Actinidia chinensis HOM05D005923 ORTHO05D007376 2.3e-76 291.2 278 56.1
Zm00001eb398210 Zea mays HOM05D005923 ORTHO05D007376 1.7e-63 248.4 551 32.5
CDE06G0114 Ceratophyllum demersum HOM05D005923 ORTHO05D007376 4.1e-54 217.2 316 40.8
Nn1g09626 Nelumbo nucifera HOM05D005923 ORTHO05D007376 9.6e-51 206.1 142 67.6
Atru.chr12.1663 Acer truncatum HOM05D005923 ORTHO05D007376 1.2e-50 205.7 149 67.8
Atru.chr12.1696 Acer truncatum HOM05D005923 ORTHO05D007376 1.1e-46 192.6 191 49.2
MD04G1248200 Malus domestica HOM05D005923 ORTHO05D007376 3.2e-46 191.0 162 57.4
Atru.chr12.1695 Acer truncatum HOM05D005923 ORTHO05D007376 3.0e-44 184.5 177 54.8
Pp3c20_18430 Physcomitrium patens HOM05D005923 ORTHO05D007376 6.4e-39 166.8 483 28.4
Os03g0260100 Oryza sativa ssp. japonica HOM05D005923 ORTHO05D007376 7.4e-35 153.3 130 51.5
AL3G13260 Arabidopsis lyrata HOM05D005923 ORTHO05D007376 3.2e-22 111.3 75 65.3
Atru.chr12.1656 Acer truncatum HOM05D005923 ORTHO05D007376 3.5e-21 107.8 125 47.2
Nitab4.5_0001853g0070 Nicotiana tabacum HOM05D005923 ORTHO05D007376 1.3e-18 99.4 80 60.0
CDE02G4030 Ceratophyllum demersum HOM05D005923 ORTHO05D000203 2.1e-18 98.6 103 45.6
Nitab4.5_0001853g0060 Nicotiana tabacum HOM05D005923 ORTHO05D007376 6.3e-18 97.1 80 58.8
Cre11.g478456 Chlamydomonas reinhardtii HOM05D005923 ORTHO05D007376 2.7e-13 81.6 448 22.8
MD04G1248000 Malus domestica HOM05D005923 ORTHO05D007376 1.9e-11 75.5 104 43.3
Ciclev10013254m.g Citrus clementina HOM05D005923 ORTHO05D007376 2.5e-06 58.5 85 41.2
SMO335G0023 Selaginella moellendorffii HOM05D047118 ORTHO05D007376 3.2e-06 58.2 131 32.1
Atru.chr12.1658 Acer truncatum HOM05D005923 ORTHO05D007376 9.4e-06 56.6 33 72.7


User provided reference genes

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