Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F02094 Erythranthe guttata HOM05D000079 ORTHO05D002610 1.8e-43 178.7 82 100.0
MSTRG.9241 Avicennia marina HOM05D000079 ORTHO05D002610 2.1e-31 138.7 94 66.0
Migut.F02092 Erythranthe guttata HOM05D000079 ORTHO05D002610 2.7e-31 138.3 85 83.5
MSTRG.27411 Avicennia marina HOM05D000079 ORTHO05D002610 6.0e-31 137.1 94 64.9
Dinv17126 Davidia involucrata HOM05D000079 ORTHO05D002610 5.1e-30 134.0 94 63.8
QL01p051268 Quercus lobata HOM05D000079 ORTHO05D002610 4.3e-29 131.0 96 60.4
Hma1.2p1_0620F.1_g190520 Hydrangea macrophylla HOM05D000079 ORTHO05D002610 4.8e-28 127.5 96 58.3
TAR362G0537 Trochodendron aralioides HOM05D000079 ORTHO05D002610 6.2e-28 127.1 94 58.5
Duzib106G1734 Durio zibethinus HOM05D000079 ORTHO05D002610 1.8e-27 125.6 93 63.4
Oeu034708.1 Olea europaea HOM05D000079 ORTHO05D002610 1.8e-27 125.6 98 60.2
TAR633G0440 Trochodendron aralioides HOM05D000079 ORTHO05D002610 1.8e-27 125.6 94 58.5
GSVIVG01003748001 Vitis vinifera HOM05D000079 ORTHO05D002610 2.4e-27 125.2 94 59.6
Haze_04606 Corylus avellana HOM05D000079 ORTHO05D002610 5.3e-27 124.0 96 60.4
Cfa006219 Carpinus fangiana HOM05D000079 ORTHO05D002610 6.9e-27 123.6 96 58.3
unitig_37.g12273 Utricularia gibba HOM05D000079 ORTHO05D002610 9.0e-27 123.2 94 60.6
CiPaw.07G085300 Carya illinoinensis HOM05D000079 ORTHO05D002610 1.2e-26 122.9 96 59.4
arahy.Tifrunner.gnm1.ann1.L8L2Y0 Arachis hypogaea HOM05D000079 ORTHO05D002610 1.5e-26 122.5 96 56.2
ClCG11G009050 Citrullus lanatus HOM05D000079 ORTHO05D002610 1.5e-26 122.5 96 56.2
Cc00_g15670 Coffea canephora HOM05D000079 ORTHO05D002610 1.5e-26 122.5 94 58.5
Thecc.05G111000 Theobroma cacao HOM05D000079 ORTHO05D002610 1.5e-26 122.5 94 59.6
Potri.010G180000 Populus trichocarpa HOM05D000079 ORTHO05D002610 2.0e-26 122.1 94 61.7
Glyma.16G044300 Glycine max HOM05D000079 ORTHO05D002610 5.8e-26 120.6 96 56.2
Manes.12G001800 Manihot esculenta HOM05D000079 ORTHO05D002610 7.6e-26 120.2 94 58.5
CSS0002559 Camellia sinensis var. sinensis HOM05D000079 ORTHO05D002610 9.9e-26 119.8 95 57.9
AUR62000272 Chenopodium quinoa HOM05D000079 ORTHO05D002610 9.9e-26 119.8 94 58.5
AUR62006620 Chenopodium quinoa HOM05D000079 ORTHO05D002610 9.9e-26 119.8 94 58.5
Glyma.19G107700 Glycine max HOM05D000079 ORTHO05D002610 1.3e-25 119.4 94 56.4
Medtr7g084940 Medicago truncatula HOM05D000079 ORTHO05D002610 1.3e-25 119.4 96 56.2
Ca_08245_v3 Cicer arietinum L. HOM05D000079 ORTHO05D002610 1.7e-25 119.0 96 56.2
Sabra10G0138000 Salix brachista HOM05D000079 ORTHO05D002610 1.7e-25 119.0 94 59.6
Gohir.D08G247950 Gossypium hirsutum HOM05D000079 ORTHO05D002610 2.2e-25 118.6 94 57.4
Gorai.004G264500 Gossypium raimondii HOM05D000079 ORTHO05D002610 2.2e-25 118.6 94 57.4
arahy.Tifrunner.gnm1.ann1.Q7SBED Arachis hypogaea HOM05D000079 ORTHO05D002610 2.9e-25 118.2 96 54.2
COL.COLO4_32081 Corchorus olitorius HOM05D000079 ORTHO05D002610 2.9e-25 118.2 94 57.4
Lsat_1_v5_gn_0_14521 Lactuca sativa HOM05D000079 ORTHO05D002610 2.9e-25 118.2 94 55.3
Nitab4.5_0005553g0020 Nicotiana tabacum HOM05D000079 ORTHO05D002610 3.8e-25 117.9 97 60.8
Sc09g0001340 Simmondsia chinensis HOM05D000079 ORTHO05D002610 3.8e-25 117.9 98 56.1
Ciclev10010861m.g Citrus clementina HOM05D000079 ORTHO05D002610 4.9e-25 117.5 94 57.4
Atru.chr12.1648 Acer truncatum HOM05D000079 ORTHO05D002610 6.4e-25 117.1 94 57.4
Gohir.A08G227600 Gossypium hirsutum HOM05D000079 ORTHO05D002610 6.4e-25 117.1 93 57.0
EL10Ac4g10024 Beta vulgaris HOM05D000079 ORTHO05D002610 1.1e-24 116.3 94 55.3
Lj8A14T31 Lonicera japonica HOM05D000079 ORTHO05D002610 1.4e-24 115.9 95 58.9
Nitab4.5_0001003g0130 Nicotiana tabacum HOM05D000079 ORTHO05D002610 1.4e-24 115.9 98 56.1
PGR119G0406 Punica granatum HOM05D000079 ORTHO05D002610 1.4e-24 115.9 95 56.8
vmacro10417 Vaccinium macrocarpon HOM05D000079 ORTHO05D002610 1.4e-24 115.9 101 55.4
Hund07375 Selenicereus undatus HOM05D000079 ORTHO05D002610 2.4e-24 115.2 94 54.3
Sopen11g004420 Solanum pennellii HOM05D000079 ORTHO05D002610 2.4e-24 115.2 97 56.7
HanXRQChr05g0141771 Helianthus annuus HOM05D000079 ORTHO05D002610 4.2e-24 114.4 95 55.8
Lalb_Chr24g0403061 Lupinus albus HOM05D000079 ORTHO05D002610 4.2e-24 114.4 94 51.1
Phvul.004G062600 Phaseolus vulgaris HOM05D000079 ORTHO05D002610 4.2e-24 114.4 94 54.3
Manes.13G000900 Manihot esculenta HOM05D000079 ORTHO05D002610 5.4e-24 114.0 94 56.4
Prupe.6G364800 Prunus persica HOM05D000079 ORTHO05D002610 7.1e-24 113.6 113 50.4
DCAR_031595 Daucus carota HOM05D000079 ORTHO05D002610 9.3e-24 113.2 94 55.3
Glyma.16G150600 Glycine max HOM05D000079 ORTHO05D002610 9.3e-24 113.2 94 54.3
Peaxi162Scf00254g00136 Petunia axillaris HOM05D000079 ORTHO05D002610 9.3e-24 113.2 98 57.1
Solyc11g008630.3 Solanum lycopersicum HOM05D000079 ORTHO05D002610 9.3e-24 113.2 97 55.7
SGA_v2.0_scaffold13G06353 Striga asiatica HOM05D000079 ORTHO05D002610 9.3e-24 113.2 98 55.1
VMungo0464G2152 Vigna mungo HOM05D000079 ORTHO05D002610 1.2e-23 112.8 94 53.2
VMungo1383G0154 Vigna mungo HOM05D000079 ORTHO05D002610 1.2e-23 112.8 95 50.5
Eucgr.B01441 Eucalyptus grandis HOM05D000079 ORTHO05D002610 1.6e-23 112.5 97 52.6
PGSC0003DMG400016249 Solanum tuberosum HOM05D000079 ORTHO05D002610 1.6e-23 112.5 97 55.7
Thhalv10018535m.g Eutrema salsugineum HOM05D000079 ORTHO05D002610 2.1e-23 112.1 90 58.9
Nn1g09832 Nelumbo nucifera HOM05D000079 ORTHO05D002610 2.7e-23 111.7 94 51.1
A07p32830 Brassica napus HOM05D000079 ORTHO05D002610 3.5e-23 111.3 94 56.4
Glyma.02G069100 Glycine max HOM05D000079 ORTHO05D002610 3.5e-23 111.3 94 55.3
AT1G65450 Arabidopsis thaliana HOM05D000079 ORTHO05D002610 4.6e-23 110.9 94 56.4
C06p39060 Brassica napus HOM05D000079 ORTHO05D002610 4.6e-23 110.9 94 57.4
BolC6t38998H Brassica oleracea HOM05D000079 ORTHO05D002610 4.6e-23 110.9 94 57.4
AL2G22140 Arabidopsis lyrata HOM05D000079 ORTHO05D002610 6.0e-23 110.5 94 56.4
Psat0s2994g0040 Pisum sativum HOM05D000079 ORTHO05D002610 6.0e-23 110.5 93 53.8
Lj1g0001343 Lotus japonicus HOM05D000079 ORTHO05D002610 7.9e-23 110.2 100 50.0
Rhsim09G0128400 Rhododendron simsii HOM05D000079 ORTHO05D002610 7.9e-23 110.2 102 52.9
Carub.0002s1119 Capsella rubella HOM05D000079 ORTHO05D002610 1.0e-22 109.8 94 56.4
FAN09G0046 Fragaria x ananassa HOM05D000079 ORTHO05D002610 1.0e-22 109.8 99 53.5
FAN14G3083 Fragaria x ananassa HOM05D000079 ORTHO05D002610 1.8e-22 109.0 99 52.5
BcaB05g24117 Brassica carinata HOM05D000079 ORTHO05D002610 2.3e-22 108.6 94 56.4
A02p13230 Brassica napus HOM05D000079 ORTHO05D002610 2.3e-22 108.6 94 55.3
BraA02t06379Z Brassica rapa HOM05D000079 ORTHO05D002610 2.3e-22 108.6 94 55.3
BraA07t30910Z Brassica rapa HOM05D000079 ORTHO05D002610 2.3e-22 108.6 94 55.3
CARHR057110 Cardamine hirsuta HOM05D000079 ORTHO05D002610 3.0e-22 108.2 94 55.3
Oeu001217.1 Olea europaea HOM05D000079 ORTHO05D002610 3.9e-22 107.8 98 53.1
Sp5g20230 Schrenkiella parvula HOM05D000079 ORTHO05D002610 3.9e-22 107.8 94 55.3
FvH4_6g00100 Fragaria vesca HOM05D000079 ORTHO05D002610 5.1e-22 107.5 99 52.5
CsaV3_2G010300 Cucumis sativus L. HOM05D000079 ORTHO05D002610 6.7e-22 107.1 96 51.0
THA.LOC104825536 Tarenaya hassleriana HOM05D000079 ORTHO05D002610 8.7e-22 106.7 94 51.1
ECA232G4138 Erigeron canadensis HOM05D000079 ORTHO05D002610 1.5e-21 105.9 92 53.3
TPR.G32195 Trifolium pratense HOM05D000079 ORTHO05D002610 1.5e-21 105.9 97 51.5
Aa31LG2G2470 Aethionema arabicum HOM05D000079 ORTHO05D002610 4.3e-21 104.4 90 54.4
Aqoxy2G04108 Aquilegia oxysepala HOM05D000079 ORTHO05D002610 4.3e-21 104.4 94 47.9
TWI36G0329 Tripterygium wilfordii HOM05D000079 ORTHO05D002610 1.3e-20 102.8 94 52.1
Rhsim09G0128600 Rhododendron simsii HOM05D000079 ORTHO05D002610 1.6e-20 102.4 103 50.5
Nn1g09672 Nelumbo nucifera HOM05D000079 ORTHO05D002610 4.8e-20 100.9 95 45.3
Medtr7g084910 Medicago truncatula HOM05D000079 ORTHO05D002610 1.4e-19 99.4 81 55.6
BcaC03g14706 Brassica carinata HOM05D000079 ORTHO05D002610 3.2e-16 88.2 62 64.5
C02p21410 Brassica napus HOM05D000079 ORTHO05D002610 3.2e-16 88.2 62 64.5
BolC2t08278H Brassica oleracea HOM05D000079 ORTHO05D002610 3.2e-16 88.2 62 64.5
HPP92_005393 Vanilla planifolia HOM05D000079 ORTHO05D002610 3.2e-16 88.2 94 45.7
Migut.J01873 Erythranthe guttata HOM05D000079 ORTHO05D002610 7.1e-16 87.0 90 48.9
ATR0743G096 Amborella trichopoda HOM05D000079 ORTHO05D002610 2.1e-15 85.5 85 48.2
SalBow3G2979 Salvia bowleyana HOM05D000079 ORTHO05D002610 2.1e-15 85.5 94 43.6
Migut.G00874 Erythranthe guttata HOM05D000079 ORTHO05D002610 2.7e-15 85.1 95 47.4
Migut.G00941 Erythranthe guttata HOM05D000079 ORTHO05D002610 2.7e-15 85.1 93 47.3
Migut.G00936 Erythranthe guttata HOM05D000079 ORTHO05D002610 3.5e-15 84.7 93 47.3
Nn5g29340 Nelumbo nucifera HOM05D000079 ORTHO05D002610 1.0e-14 83.2 100 42.0
Migut.G00943 Erythranthe guttata HOM05D000079 ORTHO05D002610 1.3e-14 82.8 93 45.2
Phvul.001G097400 Phaseolus vulgaris HOM05D000079 ORTHO05D002610 1.3e-14 82.8 94 42.6
Migut.G00880 Erythranthe guttata HOM05D000079 ORTHO05D002610 1.8e-14 82.4 98 45.9
ATR0743G222 Amborella trichopoda HOM05D000079 ORTHO05D002610 3.0e-14 81.6 94 43.6
MSTRG.6501 Avicennia marina HOM05D000079 ORTHO05D002610 3.0e-14 81.6 93 43.0
Migut.G00877 Erythranthe guttata HOM05D000079 ORTHO05D002610 3.0e-14 81.6 93 46.2
Aqoxy7G00883 Aquilegia oxysepala HOM05D000079 ORTHO05D002610 1.9e-13 79.0 92 40.2
Migut.G00872 Erythranthe guttata HOM05D000079 ORTHO05D002610 3.3e-13 78.2 61 59.0
TAR362G0306 Trochodendron aralioides HOM05D000079 ORTHO05D002610 5.7e-13 77.4 66 48.5
SGA_v2.0_scaffold69G23036 Striga asiatica HOM05D000079 ORTHO05D002610 9.6e-13 76.6 93 43.0
SEGI_11611 Sequoiadendron giganteum HOM05D000079 ORTHO05D002610 3.7e-12 74.7 97 38.1
SGA_v2.0_scaffold39G15170 Striga asiatica HOM05D000079 ORTHO05D002610 4.8e-12 74.3 94 43.6
SEGI_05897 Sequoiadendron giganteum HOM05D000079 ORTHO05D002610 1.4e-11 72.8 96 38.5
SEGI_11538 Sequoiadendron giganteum HOM05D000079 ORTHO05D002610 3.1e-11 71.6 92 38.0
SEGI_26267 Sequoiadendron giganteum HOM05D000079 ORTHO05D002610 9.0e-11 70.1 96 36.5
SGA_v2.0_scaffold94G28408 Striga asiatica HOM05D000079 ORTHO05D002610 9.0e-11 70.1 94 38.3
SEGI_05006 Sequoiadendron giganteum HOM05D000079 ORTHO05D002610 2.0e-10 68.9 92 35.9
PSO541G6427 Papaver somniferum HOM05D000079 ORTHO05D002610 3.4e-10 68.2 94 33.0
PSO541G2343 Papaver somniferum HOM05D000079 ORTHO05D002610 4.5e-10 67.8 94 30.9
Ca_17568_v3 Cicer arietinum L. HOM05D000079 ORTHO05D000211 8.4e-09 63.5 91 35.2
Migut.K00045 Erythranthe guttata HOM05D000079 ORTHO05D002610 2.5e-08 62.0 94 36.2
Mapoly0002s0087 Marchantia polymorpha HOM05D000079 ORTHO05D002610 2.5e-08 62.0 96 34.4
SMO340G0234 Selaginella moellendorffii HOM05D000079 ORTHO05D002610 1.2e-07 59.7 93 35.5
Migut.K00016 Erythranthe guttata HOM05D000079 ORTHO05D002610 4.6e-07 57.8 95 33.7
AagrBONN_evm.TU.Sc2ySwM_344.4213 Anthoceros agrestis HOM05D000079 ORTHO05D002610 1.8e-06 55.8 89 31.5
Migut.G00884 Erythranthe guttata HOM05D000079 ORTHO05D002610 1.8e-06 55.8 61 45.9
Medtr8g096530 Medicago truncatula HOM05D000079 ORTHO05D000211 1.8e-06 55.8 89 30.3
SMO226G0010 Selaginella moellendorffii HOM05D000079 ORTHO05D002610 3.0e-06 55.1 90 32.2
Potri.002G244600 Populus trichocarpa HOM05D000079 ORTHO05D002610 3.9e-06 54.7 90 32.2
Medtr3g098980 Medicago truncatula HOM05D000079 ORTHO05D000211 8.7e-06 53.5 91 30.8


User provided reference genes

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