Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F02069 Erythranthe guttata HOM05D008013 ORTHO05D010149 2.4e-41 171.8 88 100.0
Oeu001239.1 Olea europaea HOM05D008013 ORTHO05D010149 3.4e-32 141.4 88 80.7
CSS0003713 Camellia sinensis var. sinensis HOM05D008013 ORTHO05D010149 1.1e-27 126.3 88 70.5
CSS0043393 Camellia sinensis var. sinensis HOM05D008013 ORTHO05D010149 1.1e-27 126.3 88 70.5
Rhsim09G0131000 Rhododendron simsii HOM05D008013 ORTHO05D010149 1.1e-27 126.3 89 70.8
Dinv02912 Davidia involucrata HOM05D008013 ORTHO05D010149 1.9e-27 125.6 88 71.6
unitig_736.g22502 Utricularia gibba HOM05D008013 ORTHO05D010149 1.3e-26 122.9 81 77.8
Haze_04520 Corylus avellana HOM05D008013 ORTHO05D010149 2.8e-26 121.7 88 65.9
Cc09_g03310 Coffea canephora HOM05D008013 ORTHO05D010149 3.7e-26 121.3 88 70.5
MD12G1257800 Malus domestica HOM05D008013 ORTHO05D010149 3.7e-26 121.3 88 68.2
Manes.09G183801 Manihot esculenta HOM05D008013 ORTHO05D010149 8.2e-26 120.2 88 67.0
Actinidia34775 Actinidia chinensis HOM05D008013 ORTHO05D010149 1.1e-25 119.8 88 64.8
TPR.G29412 Trifolium pratense HOM05D008013 ORTHO05D010149 1.4e-25 119.4 88 63.6
Lj1g0002079 Lotus japonicus HOM05D008013 ORTHO05D010149 1.8e-25 119.0 88 62.5
CiPaw.08G117300 Carya illinoinensis HOM05D008013 ORTHO05D010149 2.4e-25 118.6 88 63.6
Lalb_Chr19g0126801 Lupinus albus HOM05D008013 ORTHO05D010149 4.0e-25 117.9 88 62.5
THA.LOC104803516 Tarenaya hassleriana HOM05D008013 ORTHO05D010149 6.9e-25 117.1 88 62.5
MD04G1240900 Malus domestica HOM05D008013 ORTHO05D010149 9.0e-25 116.7 88 65.9
Solyc04g150139.1 Solanum lycopersicum HOM05D008013 ORTHO05D010149 9.0e-25 116.7 86 68.6
RcHm_v2.0_Chr3g0448311 Rosa chinensis HOM05D008013 ORTHO05D010149 1.2e-24 116.3 88 64.8
CAN.G4.29 Capsicum annuum HOM05D008013 ORTHO05D010149 2.0e-24 115.5 86 65.1
Glyma.09G252532 Glycine max HOM05D008013 ORTHO05D010149 3.4e-24 114.8 84 61.9
Glyma.18G240151 Glycine max HOM05D008013 ORTHO05D010149 3.4e-24 114.8 84 63.1
TWI59G0485 Tripterygium wilfordii HOM05D008013 ORTHO05D010149 4.5e-24 114.4 87 60.9
Phvul.008G056200 Phaseolus vulgaris HOM05D008013 ORTHO05D010149 1.3e-23 112.8 85 60.0
HanXRQChr11g0333671 Helianthus annuus HOM05D008013 ORTHO05D010149 1.7e-23 112.5 88 62.5
GSVIVG01019150001 Vitis vinifera HOM05D008013 ORTHO05D010149 1.7e-23 112.5 88 65.9
Sed0019978 Sechium edule HOM05D008013 ORTHO05D010149 2.2e-23 112.1 88 60.2
Thecc.05G204600 Theobroma cacao HOM05D008013 ORTHO05D010149 2.2e-23 112.1 88 61.4
Nn1g08299 Nelumbo nucifera HOM05D008013 ORTHO05D010149 8.4e-23 110.2 88 62.5
CsaV3_5G032690 Cucumis sativus L. HOM05D008013 ORTHO05D010149 1.1e-22 109.8 88 61.4
CANSAT54G1767 Cannabis sativa HOM05D000837 ORTHO05D008386 2.5e-22 108.6 81 63.0
FAN05G0262 Fragaria x ananassa HOM05D008013 ORTHO05D010149 2.5e-22 108.6 101 59.4
PGR119G0441 Punica granatum HOM05D000837 ORTHO05D008386 5.5e-22 107.5 81 65.4
HanXRQChr05g0156911 Helianthus annuus HOM05D000837 ORTHO05D008386 9.3e-22 106.7 80 68.8
Hund07321 Selenicereus undatus HOM05D008013 ORTHO05D010149 1.2e-21 106.3 78 69.2
Atru.chr12.2150 Acer truncatum HOM05D008013 ORTHO05D010149 2.1e-21 105.5 81 64.2
Ciclev10013456m.g Citrus clementina HOM05D008013 ORTHO05D010149 2.7e-21 105.1 82 61.0
Gohir.A08G224100 Gossypium hirsutum HOM05D008013 ORTHO05D010149 7.9e-21 103.6 88 55.7
Gohir.D08G244400 Gossypium hirsutum HOM05D008013 ORTHO05D010149 7.9e-21 103.6 88 55.7
AL7G21760 Arabidopsis lyrata HOM05D008013 ORTHO05D010149 1.0e-20 103.2 88 56.8
Thhalv10026665m.g Eutrema salsugineum HOM05D008013 ORTHO05D010149 2.3e-20 102.1 88 55.7
Sp7g28270 Schrenkiella parvula HOM05D008013 ORTHO05D010149 2.3e-20 102.1 88 55.7
Aa31LG2G20150 Aethionema arabicum HOM05D008013 ORTHO05D010149 3.0e-20 101.7 88 58.0
Carub.0007s1021 Capsella rubella HOM05D008013 ORTHO05D010149 3.0e-20 101.7 88 54.5
vmacro10397 Vaccinium macrocarpon HOM05D000837 ORTHO05D008386 3.9e-20 101.3 103 55.3
PSO357G0534 Papaver somniferum HOM05D008013 ORTHO05D010149 6.7e-20 100.5 84 52.4
EL10Ac4g09411 Beta vulgaris HOM05D008013 ORTHO05D010149 8.7e-20 100.1 83 61.4
Potri.019G051850 Populus trichocarpa HOM05D008013 ORTHO05D010149 8.7e-20 100.1 78 59.0
PSO170G5632 Papaver somniferum HOM05D000837 ORTHO05D008386 1.5e-19 99.4 84 51.2
arahy.Tifrunner.gnm1.ann1.L7M8PN Arachis hypogaea HOM05D008013 ORTHO05D010149 1.9e-19 99.0 77 59.7
A03p59800 Brassica napus HOM05D008013 ORTHO05D010149 1.9e-19 99.0 89 53.9
C07p57840 Brassica napus HOM05D008013 ORTHO05D010149 1.9e-19 99.0 89 53.9
BolC7t46244H Brassica oleracea HOM05D008013 ORTHO05D010149 1.9e-19 99.0 89 53.9
Gohir.D13G159800 Gossypium hirsutum HOM05D008013 ORTHO05D010149 1.9e-19 99.0 81 58.0
AT4G30390 Arabidopsis thaliana HOM05D008013 ORTHO05D010149 2.5e-19 98.6 84 53.6
Gohir.A13G155000 Gossypium hirsutum HOM05D008013 ORTHO05D010149 5.7e-19 97.4 81 58.0
Ah.06g195780 Amaranthus hybridus HOM05D008013 ORTHO05D010149 7.4e-19 97.1 85 58.8
A08p19260 Brassica napus HOM05D008013 ORTHO05D010149 9.7e-19 96.7 88 52.3
BraA08t33887Z Brassica rapa HOM05D008013 ORTHO05D010149 9.7e-19 96.7 88 52.3
BcaNung00543 Brassica carinata HOM05D008013 ORTHO05D010149 1.6e-18 95.9 90 51.1
BraA03t15033Z Brassica rapa HOM05D008013 ORTHO05D010149 1.6e-18 95.9 89 52.8
Gorai.004G260700 Gossypium raimondii HOM05D008013 ORTHO05D010149 3.1e-17 91.7 81 54.3
Hund21874 Selenicereus undatus HOM05D008013 ORTHO05D010149 4.5e-16 87.8 69 63.8
SHI02464 Sapria himalayana HOM05D008013 ORTHO05D010149 7.7e-16 87.0 78 52.6
ClCG10G008070 Citrullus lanatus HOM05D000837 ORTHO05D008386 5.0e-15 84.3 117 41.0
BcaB03g12645 Brassica carinata HOM05D008013 ORTHO05D010149 1.4e-14 82.8 89 50.6
PGSC0003DMG402023117 Solanum tuberosum HOM05D008013 ORTHO05D010149 2.5e-14 82.0 89 50.6
Pp3c1_15100 Physcomitrium patens HOM05D008013 ORTHO05D010149 1.6e-13 79.3 86 39.5
AagrBONN_evm.TU.Sc2ySwM_228.1824 Anthoceros agrestis HOM05D008013 ORTHO05D010149 2.2e-10 68.9 80 42.5
Sed0019520 Sechium edule HOM05D008013 ORTHO05D010149 2.8e-10 68.6 48 64.6
Sc16g0010260 Simmondsia chinensis HOM05D008013 ORTHO05D010149 1.1e-09 66.6 48 64.6
Sabra19G0056800 Salix brachista HOM05D008013 ORTHO05D010149 1.4e-09 66.2 43 69.8
TAR109G0001 Trochodendron aralioides HOM05D008013 ORTHO05D010149 1.4e-09 66.2 46 67.4
FAN09G3946 Fragaria x ananassa HOM05D000837 ORTHO05D008386 4.1e-09 64.7 46 67.4
CARHR238290 Cardamine hirsuta HOM05D008013 ORTHO05D010149 6.9e-09 63.9 49 57.1
SalBow3G2297 Salvia bowleyana HOM05D000837 ORTHO05D008386 7.7e-08 60.5 70 45.7
SalBow3G2750 Salvia bowleyana HOM05D000837 ORTHO05D008386 7.7e-08 60.5 70 45.7
MBI07_g00621_MAGBIO Magnolia biondii HOM05D000837 ORTHO05D008386 1.0e-07 60.1 50 64.0
BcaC01g01153 Brassica carinata HOM05D008013 ORTHO05D010149 5.5e-06 54.3 44 54.5


User provided reference genes

Program Settings